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The map label for this gene is yjbJ [H]

Identifier: 118579309

GI number: 118579309

Start: 916660

End: 917436

Strand: Reverse

Name: yjbJ [H]

Synonym: Ppro_0872

Alternate gene names: 118579309

Gene position: 917436-916660 (Counterclockwise)

Preceding gene: 118579310

Following gene: 118579308

Centisome position: 22.89

GC content: 65.25

Gene sequence:

>777_bases
ATGCCCATCAGCATCAGCGAAAAGCCATCGCTGCTCTCGGCCCTTCTTGCACAGGCGCCCCAGGAGCGGTCCAGCGTCGA
GACAGACACCGCCTTTGCCGGAAAGTTGGATGCAGCTCTTGAGAATACCGTCGTCACCCCCACCAACGCCCAGGCTCTGG
CGGAAACGCTCAACCTGCAGATGCTCCACTCAACCCTGGCCCTGGCCGGAGACAAACCGGCCGACAACAGCCCGCCCCCC
CAACCCTTCAGCCGCCAGTCATCCCTTGTCCAGTCCCTGCTCGACTCCTACCGCGCCACCCAGGCCGAGGCAGACGCATC
GTCGGATCAGTCATCGACCAAGCCGCAACCGCTGCCGGACTCAGGCACCCAATCCGCCAGCCTGCCGAGCAACAGCCAGT
GGCTCGAGCCGATCATCGCCAAGGCATCCCGGCATTACGGTGTCGACACGGGGCTAATCAAGGCGGTCATCAAGGCCGAG
AGCGACTTCAACCCACGGGCGGTCTCCAGCGCCGGCGCACGGGGACTGATGCAGCTCATGCCCGCCACCGCCCGCGGCCT
GGGGGTAAGCGACTCCTTCGACCCGGAGCAGAACGTCATGGCCGGGACGCGCTTTCTCCGCGACCTGCTCAACCGCTACA
ACGGCGACCTGGAATCAACCCTGGCAGCCTACAACTGGGGGCCGGGCAATGTGGACAGGCATCCCGACCGCCTGCCGCGA
GAAACCCGCACCTACCTGACGCGCGTCAAACAGCTCTACGCATCCTTCACGGCCTGA

Upstream 100 bases:

>100_bases
ACAAAAAAGAGGCCGCCGAACTGCTCAACCTGAAAAGGACCACCTTGATCGAGAAACTGAAGAAGAAGAATCTGGTCTTC
GTCGAGGAATAGGAACCGCC

Downstream 100 bases:

>100_bases
CCCTCCCTGTCTGACCAATTCGGGCTTGCATCCCCACAAGCTGACGTGTCATAATTCGTCGATTTTTCCCTCCCAGCCGA
TCGTTTGCACACGAACAGGA

Product: lytic transglycosylase catalytic subunit

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MPISISEKPSLLSALLAQAPQERSSVETDTAFAGKLDAALENTVVTPTNAQALAETLNLQMLHSTLALAGDKPADNSPPP
QPFSRQSSLVQSLLDSYRATQAEADASSDQSSTKPQPLPDSGTQSASLPSNSQWLEPIIAKASRHYGVDTGLIKAVIKAE
SDFNPRAVSSAGARGLMQLMPATARGLGVSDSFDPEQNVMAGTRFLRDLLNRYNGDLESTLAAYNWGPGNVDRHPDRLPR
ETRTYLTRVKQLYASFTA

Sequences:

>Translated_258_residues
MPISISEKPSLLSALLAQAPQERSSVETDTAFAGKLDAALENTVVTPTNAQALAETLNLQMLHSTLALAGDKPADNSPPP
QPFSRQSSLVQSLLDSYRATQAEADASSDQSSTKPQPLPDSGTQSASLPSNSQWLEPIIAKASRHYGVDTGLIKAVIKAE
SDFNPRAVSSAGARGLMQLMPATARGLGVSDSFDPEQNVMAGTRFLRDLLNRYNGDLESTLAAYNWGPGNVDRHPDRLPR
ETRTYLTRVKQLYASFTA
>Mature_257_residues
PISISEKPSLLSALLAQAPQERSSVETDTAFAGKLDAALENTVVTPTNAQALAETLNLQMLHSTLALAGDKPADNSPPPQ
PFSRQSSLVQSLLDSYRATQAEADASSDQSSTKPQPLPDSGTQSASLPSNSQWLEPIIAKASRHYGVDTGLIKAVIKAES
DFNPRAVSSAGARGLMQLMPATARGLGVSDSFDPEQNVMAGTRFLRDLLNRYNGDLESTLAAYNWGPGNVDRHPDRLPRE
TRTYLTRVKQLYASFTA

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87082191, Length=114, Percent_Identity=40.3508771929825, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI171474010, Length=103, Percent_Identity=33.0097087378641, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 27682; Mature: 27551

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00922 TRANSGLYCOSYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISISEKPSLLSALLAQAPQERSSVETDTAFAGKLDAALENTVVTPTNAQALAETLNLQ
CCCCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
MLHSTLALAGDKPADNSPPPQPFSRQSSLVQSLLDSYRATQAEADASSDQSSTKPQPLPD
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SGTQSASLPSNSQWLEPIIAKASRHYGVDTGLIKAVIKAESDFNPRAVSSAGARGLMQLM
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
PATARGLGVSDSFDPEQNVMAGTRFLRDLLNRYNGDLESTLAAYNWGPGNVDRHPDRLPR
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCH
ETRTYLTRVKQLYASFTA
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PISISEKPSLLSALLAQAPQERSSVETDTAFAGKLDAALENTVVTPTNAQALAETLNLQ
CCCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
MLHSTLALAGDKPADNSPPPQPFSRQSSLVQSLLDSYRATQAEADASSDQSSTKPQPLPD
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SGTQSASLPSNSQWLEPIIAKASRHYGVDTGLIKAVIKAESDFNPRAVSSAGARGLMQLM
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
PATARGLGVSDSFDPEQNVMAGTRFLRDLLNRYNGDLESTLAAYNWGPGNVDRHPDRLPR
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCH
ETRTYLTRVKQLYASFTA
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]