| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is engD [H]
Identifier: 118579184
GI number: 118579184
Start: 786267
End: 787361
Strand: Direct
Name: engD [H]
Synonym: Ppro_0746
Alternate gene names: 118579184
Gene position: 786267-787361 (Clockwise)
Preceding gene: 118579183
Following gene: 118579187
Centisome position: 19.62
GC content: 60.73
Gene sequence:
>1095_bases ATGGGTTTCAACTGCGGTATCGTCGGTCTCCCCAATGTGGGGAAATCCACCATATTCAATGCGCTGACTTCCGCCGGCGC CGAGTCGGCCAACTATCCTTTCTGCACCATCGACCCCAATGTGGGGATCGTGCAGGTGCCGGATCCGCGCATGGATCAGC TGTCGGCCATCGTCAATCCGCAGCGTATCCAGCCCACCACCATTGAGTTCGTCGATATCGCCGGTCTGGTCAAGGGAGCC AGCGCCGGGGAGGGGCTGGGCAACCAATTCCTCGGCCATATCCGCAGCGTTGATGCCATCATCCATGTGGTGCGCTGCTT CGATGACGATAATGTGGTTCATGTCAACGGACGTGTGTCGCCGGCTGCGGACATCGATACCATCCATACCGAGTTGGGGC TCTCCGACCTGGAGACGGTGGAGAAGAAATTGCAGCGTGCCGAAAAGGCTGGTCGGAGCGGTGATCGCAAGCTGAAAGAT GAGGCCGCCTTCTACCAGCGGGTCAGGGATCTGCTTGATCAGGGCAAGAACGTGCGCGGCGTGGCGGAAAACGAGGACGA GCGTCTCTGGTTGCGCGATCTGCACCTCCTGACCGACAAGCCGGTCTTGTACGTGGCCAACGTGGCCGAGGATGATCTTG GCGGTGAACACCCCTTTGTGGGGCAGGTGCAGCAGATCGCCAGTCTGGAGGGGGCCGGTGTGGTCACCATCTGCGGCAAG CTGGAGGCGGAGATCTCAGAACTGGAGGGTGAGGAGAAACAGGCCTTCCTCAATGACATGGGGCTTGCCGAGGCCGGCCT TGACCGGCTGATCCGCAGTGGCTACGAACTGCTTGGCCTGATCACCTACTTCACCGCCGGGGTCAAGGAGGTGCGCGCCT GGACCATTACCCGAGGGACCAAGGCGCCCCAGGCAGCAGGCGTGATCCACTCCGACTTCGAGAAGGGATTCATTCGCGCC GAGGTAATCGCTTTCGACGACTTCATCGCCTGCAATGGCGAGGCGGGTGCCAAGGAGAAGGGGCTGATGCGGCTGGAGGG GAAGGAGTACGTTGTCAGGGATGGCGATGTGATGCACTTCCGCTTCAACGTCTGA
Upstream 100 bases:
>100_bases CTGGAAATGCTGCTGGATCAGGGGCTGCCGAAGGCCATGAGTCTGTTCAATAATAGAAATTTCCTGGAAAAGTGATTTCC CAGATGAAAGGCGAGTCTTT
Downstream 100 bases:
>100_bases CAGTCGGCATAAACATGAGGCAGGAAAAAGCCACCCCCGATTCCCCGCAACAGCGGGTCGAGGGTGGCTATTTTTGTGGC GCTACGGGAAAACGCTCAGT
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MGFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNPQRIQPTTIEFVDIAGLVKGA SAGEGLGNQFLGHIRSVDAIIHVVRCFDDDNVVHVNGRVSPAADIDTIHTELGLSDLETVEKKLQRAEKAGRSGDRKLKD EAAFYQRVRDLLDQGKNVRGVAENEDERLWLRDLHLLTDKPVLYVANVAEDDLGGEHPFVGQVQQIASLEGAGVVTICGK LEAEISELEGEEKQAFLNDMGLAEAGLDRLIRSGYELLGLITYFTAGVKEVRAWTITRGTKAPQAAGVIHSDFEKGFIRA EVIAFDDFIACNGEAGAKEKGLMRLEGKEYVVRDGDVMHFRFNV
Sequences:
>Translated_364_residues MGFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNPQRIQPTTIEFVDIAGLVKGA SAGEGLGNQFLGHIRSVDAIIHVVRCFDDDNVVHVNGRVSPAADIDTIHTELGLSDLETVEKKLQRAEKAGRSGDRKLKD EAAFYQRVRDLLDQGKNVRGVAENEDERLWLRDLHLLTDKPVLYVANVAEDDLGGEHPFVGQVQQIASLEGAGVVTICGK LEAEISELEGEEKQAFLNDMGLAEAGLDRLIRSGYELLGLITYFTAGVKEVRAWTITRGTKAPQAAGVIHSDFEKGFIRA EVIAFDDFIACNGEAGAKEKGLMRLEGKEYVVRDGDVMHFRFNV >Mature_363_residues GFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNPQRIQPTTIEFVDIAGLVKGAS AGEGLGNQFLGHIRSVDAIIHVVRCFDDDNVVHVNGRVSPAADIDTIHTELGLSDLETVEKKLQRAEKAGRSGDRKLKDE AAFYQRVRDLLDQGKNVRGVAENEDERLWLRDLHLLTDKPVLYVANVAEDDLGGEHPFVGQVQQIASLEGAGVVTICGKL EAEISELEGEEKQAFLNDMGLAEAGLDRLIRSGYELLGLITYFTAGVKEVRAWTITRGTKAPQAAGVIHSDFEKGFIRAE VIAFDDFIACNGEAGAKEKGLMRLEGKEYVVRDGDVMHFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=369, Percent_Identity=44.9864498644986, Blast_Score=310, Evalue=1e-84, Organism=Homo sapiens, GI58761502, Length=220, Percent_Identity=40.4545454545455, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI24308117, Length=217, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1787454, Length=364, Percent_Identity=59.0659340659341, Blast_Score=454, Evalue=1e-129, Organism=Escherichia coli, GI1789574, Length=101, Percent_Identity=35.6435643564356, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17509631, Length=366, Percent_Identity=43.1693989071038, Blast_Score=292, Evalue=2e-79, Organism=Saccharomyces cerevisiae, GI6319499, Length=370, Percent_Identity=40.8108108108108, Blast_Score=263, Evalue=4e-71, Organism=Saccharomyces cerevisiae, GI6321773, Length=380, Percent_Identity=36.3157894736842, Blast_Score=213, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6321649, Length=141, Percent_Identity=39.7163120567376, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24640873, Length=363, Percent_Identity=44.0771349862259, Blast_Score=298, Evalue=3e-81, Organism=Drosophila melanogaster, GI24640877, Length=363, Percent_Identity=44.0771349862259, Blast_Score=298, Evalue=3e-81, Organism=Drosophila melanogaster, GI24640875, Length=363, Percent_Identity=44.0771349862259, Blast_Score=298, Evalue=3e-81, Organism=Drosophila melanogaster, GI24640879, Length=325, Percent_Identity=41.8461538461538, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24585318, Length=146, Percent_Identity=30.8219178082192, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 39577; Mature: 39446
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNP CCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHCCC QRIQPTTIEFVDIAGLVKGASAGEGLGNQFLGHIRSVDAIIHVVRCFDDDNVVHVNGRVS CCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC PAADIDTIHTELGLSDLETVEKKLQRAEKAGRSGDRKLKDEAAFYQRVRDLLDQGKNVRG CCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC VAENEDERLWLRDLHLLTDKPVLYVANVAEDDLGGEHPFVGQVQQIASLEGAGVVTICGK CCCCCCCEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECH LEAEISELEGEEKQAFLNDMGLAEAGLDRLIRSGYELLGLITYFTAGVKEVRAWTITRGT HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC KAPQAAGVIHSDFEKGFIRAEVIAFDDFIACNGEAGAKEKGLMRLEGKEYVVRDGDVMHF CCCHHHCCHHHHHHCCCEEEEEEEEECEEEECCCCCCCCCCCEEECCCEEEEECCCEEEE RFNV EECC >Mature Secondary Structure GFNCGIVGLPNVGKSTIFNALTSAGAESANYPFCTIDPNVGIVQVPDPRMDQLSAIVNP CCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHCCC QRIQPTTIEFVDIAGLVKGASAGEGLGNQFLGHIRSVDAIIHVVRCFDDDNVVHVNGRVS CCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC PAADIDTIHTELGLSDLETVEKKLQRAEKAGRSGDRKLKDEAAFYQRVRDLLDQGKNVRG CCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC VAENEDERLWLRDLHLLTDKPVLYVANVAEDDLGGEHPFVGQVQQIASLEGAGVVTICGK CCCCCCCEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECH LEAEISELEGEEKQAFLNDMGLAEAGLDRLIRSGYELLGLITYFTAGVKEVRAWTITRGT HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC KAPQAAGVIHSDFEKGFIRAEVIAFDDFIACNGEAGAKEKGLMRLEGKEYVVRDGDVMHF CCCHHHCCHHHHHHCCCEEEEEEEEECEEEECCCCCCCCCCCEEECCCEEEEECCCEEEE RFNV EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA