| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579006
Identifier: 118579006
GI number: 118579006
Start: 602833
End: 604158
Strand: Direct
Name: 118579006
Synonym: Ppro_0567
Alternate gene names: NA
Gene position: 602833-604158 (Clockwise)
Preceding gene: 118579005
Following gene: 118579009
Centisome position: 15.04
GC content: 67.72
Gene sequence:
>1326_bases ATGAGGCCGGTGCGGGTGATCATCATGGGGGCAGCGGGCAGGGACTTCCACAACTTTGCCTGCTGTTTCCGCGACAACCC CGCCTACCGGGTCGTCGCCTTCACCGCTGCCCAGATCCCCTACATCGCCCATCGCTGCTATCCCGCCTCCCTGGCCGGCA CTCTCTACCCCCACGGCATCCCGATCCGGCCGGAGGAGGAGCTTTCTGACCTGATCCGGCGCCAGCGGGTCGACCAGGTG GTCTTCGCCTACAGCGACATCTCCCATACCGAGCTTATGCACACCGCCTCCCGGGTCCTGGCACTGGGGGCCGACTTCCG CCTCATCGGACCCGACGCCACCATGCTCAGGAGCAGGCGGCCGGTGGTCTCGGTCTGCGCCGTCAGGACCGGCTGCGGCA AAAGCCAGGTAGTACGCTACTTCTGTGACCTTCTGACGGAGCGGGGGCTCAGGCCGCTGGTGGTGCGCCACCCCATGCCC TACGGCGACCTGGAGGAACAGGCGGTGCAGCGCTTCTCCTCTGCCGCCGATCTGGAACAGTTCCATTGCACCATTGAGGA GCGGGAGGAGTACGAGCATCTGCTGGCCCAGGGCGCCATGGTGTATGCCGGCGTGGATTACCGGGCCATCCTCCGCCGGG CGGAGAAGGAGGCGCGGCTCCTCATCTGGGACGGCGGCAACAACGACCTCCCCTTCTTCCGGCCCGACCTGGAGATCGTG GTGGTTGACCCGCTTCGTCCGGGGCATGAGACCTCCTGGTACCCGGGTGAGGTGAACCTGCGGCGGGCCGGGATCGTGGT GGTCAACAAGGTCAACGCCGCTGATTCGGCGGCTGTCCAGGCGGTGGAGCAGTCGGTCCGCCGGGTGAATCCGGCCGCGC TGATCGTGCGCACCGCTTCGCAGGTGTGGGTGGATGAAGGGGAGTGGATCAGGGGAAAACGGGTGCTGGTGGTGGAGGAC GGGCCGACGGTCACCCACGGTTCCATGCCCAGCGGCGCCGGGCTGGCCGCTGCCGTGCAGTATGGCGCCGCACAGGTCAT CGATCCGCGCCCCTGGGCGGTCGGCTCCCTGGCTGAGGCCTATCAGCGACACCCACACCTGGGGCCGGTCCTGCCCGCCC TGGGGTATCGCCCCGAGCAGGTGGCCGAACTTGGCGCCACCATCTCAGGAGTTCCGTGTGACCTGGTGCTGGCCGCCACC CCCATCGACCTGGCCCGCCTGGTCCGGGTCGACACGCCGATCCTGCGGGTCTCCTACGCCATTGCCGAACCGGAGGGGAC CCCGCTCAGGGACGCCTTTCTCCGTTTTTTGTGTTCTCTGCCGTAA
Upstream 100 bases:
>100_bases CGGACCGGAACGTGCTCCGCCTGGTGCCGCCGCTCACCATCGGTGACGACGAGCTGGAGCAGGCGCTCTCCATCATCGAT GAGGGGCTGGGTGCGGTGGC
Downstream 100 bases:
>100_bases GGGATGAATGGTGTTGTCGCGGCGGCGCGGCGACTGCTCCTGCTCTTTCCTGTCTCATCTCCTCCCTGTTCCGTGACGTG TGCTCCCTTTCAGAAGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MRPVRVIIMGAAGRDFHNFACCFRDNPAYRVVAFTAAQIPYIAHRCYPASLAGTLYPHGIPIRPEEELSDLIRRQRVDQV VFAYSDISHTELMHTASRVLALGADFRLIGPDATMLRSRRPVVSVCAVRTGCGKSQVVRYFCDLLTERGLRPLVVRHPMP YGDLEEQAVQRFSSAADLEQFHCTIEEREEYEHLLAQGAMVYAGVDYRAILRRAEKEARLLIWDGGNNDLPFFRPDLEIV VVDPLRPGHETSWYPGEVNLRRAGIVVVNKVNAADSAAVQAVEQSVRRVNPAALIVRTASQVWVDEGEWIRGKRVLVVED GPTVTHGSMPSGAGLAAAVQYGAAQVIDPRPWAVGSLAEAYQRHPHLGPVLPALGYRPEQVAELGATISGVPCDLVLAAT PIDLARLVRVDTPILRVSYAIAEPEGTPLRDAFLRFLCSLP
Sequences:
>Translated_441_residues MRPVRVIIMGAAGRDFHNFACCFRDNPAYRVVAFTAAQIPYIAHRCYPASLAGTLYPHGIPIRPEEELSDLIRRQRVDQV VFAYSDISHTELMHTASRVLALGADFRLIGPDATMLRSRRPVVSVCAVRTGCGKSQVVRYFCDLLTERGLRPLVVRHPMP YGDLEEQAVQRFSSAADLEQFHCTIEEREEYEHLLAQGAMVYAGVDYRAILRRAEKEARLLIWDGGNNDLPFFRPDLEIV VVDPLRPGHETSWYPGEVNLRRAGIVVVNKVNAADSAAVQAVEQSVRRVNPAALIVRTASQVWVDEGEWIRGKRVLVVED GPTVTHGSMPSGAGLAAAVQYGAAQVIDPRPWAVGSLAEAYQRHPHLGPVLPALGYRPEQVAELGATISGVPCDLVLAAT PIDLARLVRVDTPILRVSYAIAEPEGTPLRDAFLRFLCSLP >Mature_441_residues MRPVRVIIMGAAGRDFHNFACCFRDNPAYRVVAFTAAQIPYIAHRCYPASLAGTLYPHGIPIRPEEELSDLIRRQRVDQV VFAYSDISHTELMHTASRVLALGADFRLIGPDATMLRSRRPVVSVCAVRTGCGKSQVVRYFCDLLTERGLRPLVVRHPMP YGDLEEQAVQRFSSAADLEQFHCTIEEREEYEHLLAQGAMVYAGVDYRAILRRAEKEARLLIWDGGNNDLPFFRPDLEIV VVDPLRPGHETSWYPGEVNLRRAGIVVVNKVNAADSAAVQAVEQSVRRVNPAALIVRTASQVWVDEGEWIRGKRVLVVED GPTVTHGSMPSGAGLAAAVQYGAAQVIDPRPWAVGSLAEAYQRHPHLGPVLPALGYRPEQVAELGATISGVPCDLVLAAT PIDLARLVRVDTPILRVSYAIAEPEGTPLRDAFLRFLCSLP
Specific function: Unknown
COG id: COG2403
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48648; Mature: 48648
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVRVIIMGAAGRDFHNFACCFRDNPAYRVVAFTAAQIPYIAHRCYPASLAGTLYPHGI CCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEHHHCCHHHHHCCCHHHCCCCCCCCC PIRPEEELSDLIRRQRVDQVVFAYSDISHTELMHTASRVLALGADFRLIGPDATMLRSRR CCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCC PVVSVCAVRTGCGKSQVVRYFCDLLTERGLRPLVVRHPMPYGDLEEQAVQRFSSAADLEQ CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHH FHCTIEEREEYEHLLAQGAMVYAGVDYRAILRRAEKEARLLIWDGGNNDLPFFRPDLEIV HHCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCEECCCCEEE VVDPLRPGHETSWYPGEVNLRRAGIVVVNKVNAADSAAVQAVEQSVRRVNPAALIVRTAS EECCCCCCCCCCCCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCHHEEEEECH QVWVDEGEWIRGKRVLVVEDGPTVTHGSMPSGAGLAAAVQYGAAQVIDPRPWAVGSLAEA HHEECCCCEECCCEEEEEECCCCEECCCCCCCCCHHHHHHHCCCEECCCCCCCHHHHHHH YQRHPHLGPVLPALGYRPEQVAELGATISGVPCDLVLAATPIDLARLVRVDTPILRVSYA HHHCCCCCCHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEE IAEPEGTPLRDAFLRFLCSLP EECCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRPVRVIIMGAAGRDFHNFACCFRDNPAYRVVAFTAAQIPYIAHRCYPASLAGTLYPHGI CCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEHHHCCHHHHHCCCHHHCCCCCCCCC PIRPEEELSDLIRRQRVDQVVFAYSDISHTELMHTASRVLALGADFRLIGPDATMLRSRR CCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCC PVVSVCAVRTGCGKSQVVRYFCDLLTERGLRPLVVRHPMPYGDLEEQAVQRFSSAADLEQ CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHH FHCTIEEREEYEHLLAQGAMVYAGVDYRAILRRAEKEARLLIWDGGNNDLPFFRPDLEIV HHCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCEECCCCEEE VVDPLRPGHETSWYPGEVNLRRAGIVVVNKVNAADSAAVQAVEQSVRRVNPAALIVRTAS EECCCCCCCCCCCCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCHHEEEEECH QVWVDEGEWIRGKRVLVVEDGPTVTHGSMPSGAGLAAAVQYGAAQVIDPRPWAVGSLAEA HHEECCCCEECCCEEEEEECCCCEECCCCCCCCCHHHHHHHCCCEECCCCCCCHHHHHHH YQRHPHLGPVLPALGYRPEQVAELGATISGVPCDLVLAATPIDLARLVRVDTPILRVSYA HHHCCCCCCHHHHCCCCHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEE IAEPEGTPLRDAFLRFLCSLP EECCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA