| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118578959
Identifier: 118578959
GI number: 118578959
Start: 550874
End: 552391
Strand: Reverse
Name: 118578959
Synonym: Ppro_0520
Alternate gene names: NA
Gene position: 552391-550874 (Counterclockwise)
Preceding gene: 118578960
Following gene: 118578958
Centisome position: 13.78
GC content: 60.21
Gene sequence:
>1518_bases ATGAGAAGATTCACCCTGGCGATCAGCCTTTTACTTTCACTCTGTTTCACCCTGTCCGTATTCGCGGCCCAGCCGCTGCG GGTGTTTGTTTCCGACATGAACGTGGTGGGGGTCCAGAACAAAGATGAACTGAAAGCGACTCTGCAGACCCTGCTGGCTT CGCGCCTGAACGGCGAGAACATCACCGCCGTGGCCAGTTCCGCCGAGGCCGATGCCGTGCTGACCGGGACCTACGTGGTA ATCGGTAAGGTATTCAGCGTGGATGCCATGGCCAAAAGCGCCAACGGCAAGACCCTGACCCGCGCCTTTGTACAGGGAGA GAGCCAGGACGAACTGATCCCGGCAATGGGCAAGCTGGCCGACAAGCTGAGCGCTGACCTCTCCAAGCTGTACGCCAGCG GCCAGATAGCCTCCGGCGCACCCAGCTATGCCGCCACCTCCACCGTTGTGCGCCCGAACAAAGTAACCCAGGGCAACAGC GTCCAGAGCGCCCTGGTGCGCCCGGACCAGAGCCAGGAGATCATCAGGCCGCGTGACCTGGAGCGCAACTATGTTGGCGG CTGGCAGAGCAAGCGCCTTCCCGGAGCAGCCAACCTGCTGGCAATGGGCAAGACGCTTCCCGACGGCAGCAGGGAAGTGT TTCTGGCTGAGGACCGCCGCCTCTCCTACTACCATCAGGCGGAAAACATGAGCCTGCGCTTTGCCACCGAATTCGGCACC ACGGACAAGATCATCGGCCTGGACACCATCCAGGGCAGCGACGGCAAGACCGAAGTATACCTGACCATCATGCATGGCGA AGAGCCGTCCTCCCAGATCTGGCAGGTGGGGGACAACAGGATGGAGTGCGTGGCCAAGGATCTACCCTACTACCTGCGCG TCATCGGCCTGGCAGGCGGCCCCAAAAAGGTCTATGCCCAGTCCATGGGGCGCGAAACGGAATTCTACGGCAATGTATCC GAGCTTACCCGCACGGGGTCGAAGGTAACCCTGTCCAACGAGATCGTGATGCCCCGCTTCGGCAACATCTTCACCTTCAA CCAGTTCAAGGACCAGCAGGGTGTCCTGTACACCGTGGTGCTGCACCCCGACGGCTACCTGGTGGTCTTCGACCAGGAGC AGAAGGAACTCTGGCGCAGCAACGACAAGTTCGGCGGCTCCGAGCTCTACTACCAGAAGGACAACTCGGAGAACTTCCGC ATTACCAACGACAAGTACCGCTGGTTTTTCATGAACCAGCGCATCCAGGTAACCTCGCGCAACGAAGTGCTGGTGGGCAA GAACGACGGCTTCTGGGTGCTGGGCAACGCCCGCTCCTACAAGAAGGGCGCCGTCTACTGCTTCATCTGGAACGGCTCCA ACCTGGACGAGCTCTGGCACACCCGCGACACCCAGAACTACATGCCGGACTTCTATTTCGACGAGGCCAGCAGCGAACTG CTGCTTCTGCAGACAGTACAGAGACCCGGCCTGACCACACGGGGCACCGCTTCACTGGCCATCAAGAAGGTTGAATAA
Upstream 100 bases:
>100_bases AGTACAACCTGAAGGGCGGGAGCAATCCCGCCCTTTTTTTTTGACTTTAACAGGCAGTTTTGCGATACTCCGCAAGTTGA CATCAAGACTCGGAGGCACC
Downstream 100 bases:
>100_bases CCGCTTCCCCTCAGCCCCCCAAGCGGGGGCTGATTCGTGAGTTGCTCACATTCCGAGATTCCAACCCTATGAACAACAGA CTTCCCGACATATCGCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: FG-GAP Repeat Protein
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MRRFTLAISLLLSLCFTLSVFAAQPLRVFVSDMNVVGVQNKDELKATLQTLLASRLNGENITAVASSAEADAVLTGTYVV IGKVFSVDAMAKSANGKTLTRAFVQGESQDELIPAMGKLADKLSADLSKLYASGQIASGAPSYAATSTVVRPNKVTQGNS VQSALVRPDQSQEIIRPRDLERNYVGGWQSKRLPGAANLLAMGKTLPDGSREVFLAEDRRLSYYHQAENMSLRFATEFGT TDKIIGLDTIQGSDGKTEVYLTIMHGEEPSSQIWQVGDNRMECVAKDLPYYLRVIGLAGGPKKVYAQSMGRETEFYGNVS ELTRTGSKVTLSNEIVMPRFGNIFTFNQFKDQQGVLYTVVLHPDGYLVVFDQEQKELWRSNDKFGGSELYYQKDNSENFR ITNDKYRWFFMNQRIQVTSRNEVLVGKNDGFWVLGNARSYKKGAVYCFIWNGSNLDELWHTRDTQNYMPDFYFDEASSEL LLLQTVQRPGLTTRGTASLAIKKVE
Sequences:
>Translated_505_residues MRRFTLAISLLLSLCFTLSVFAAQPLRVFVSDMNVVGVQNKDELKATLQTLLASRLNGENITAVASSAEADAVLTGTYVV IGKVFSVDAMAKSANGKTLTRAFVQGESQDELIPAMGKLADKLSADLSKLYASGQIASGAPSYAATSTVVRPNKVTQGNS VQSALVRPDQSQEIIRPRDLERNYVGGWQSKRLPGAANLLAMGKTLPDGSREVFLAEDRRLSYYHQAENMSLRFATEFGT TDKIIGLDTIQGSDGKTEVYLTIMHGEEPSSQIWQVGDNRMECVAKDLPYYLRVIGLAGGPKKVYAQSMGRETEFYGNVS ELTRTGSKVTLSNEIVMPRFGNIFTFNQFKDQQGVLYTVVLHPDGYLVVFDQEQKELWRSNDKFGGSELYYQKDNSENFR ITNDKYRWFFMNQRIQVTSRNEVLVGKNDGFWVLGNARSYKKGAVYCFIWNGSNLDELWHTRDTQNYMPDFYFDEASSEL LLLQTVQRPGLTTRGTASLAIKKVE >Mature_505_residues MRRFTLAISLLLSLCFTLSVFAAQPLRVFVSDMNVVGVQNKDELKATLQTLLASRLNGENITAVASSAEADAVLTGTYVV IGKVFSVDAMAKSANGKTLTRAFVQGESQDELIPAMGKLADKLSADLSKLYASGQIASGAPSYAATSTVVRPNKVTQGNS VQSALVRPDQSQEIIRPRDLERNYVGGWQSKRLPGAANLLAMGKTLPDGSREVFLAEDRRLSYYHQAENMSLRFATEFGT TDKIIGLDTIQGSDGKTEVYLTIMHGEEPSSQIWQVGDNRMECVAKDLPYYLRVIGLAGGPKKVYAQSMGRETEFYGNVS ELTRTGSKVTLSNEIVMPRFGNIFTFNQFKDQQGVLYTVVLHPDGYLVVFDQEQKELWRSNDKFGGSELYYQKDNSENFR ITNDKYRWFFMNQRIQVTSRNEVLVGKNDGFWVLGNARSYKKGAVYCFIWNGSNLDELWHTRDTQNYMPDFYFDEASSEL LLLQTVQRPGLTTRGTASLAIKKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56360; Mature: 56360
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFTLAISLLLSLCFTLSVFAAQPLRVFVSDMNVVGVQNKDELKATLQTLLASRLNGEN CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCC ITAVASSAEADAVLTGTYVVIGKVFSVDAMAKSANGKTLTRAFVQGESQDELIPAMGKLA EEEEECCCCCCEEEEEEEEEEEHHHHHHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHH DKLSADLSKLYASGQIASGAPSYAATSTVVRPNKVTQGNSVQSALVRPDQSQEIIRPRDL HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCC ERNYVGGWQSKRLPGAANLLAMGKTLPDGSREVFLAEDRRLSYYHQAENMSLRFATEFGT CCCCCCCCCCCCCCCHHHHHEECCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCC TDKIIGLDTIQGSDGKTEVYLTIMHGEEPSSQIWQVGDNRMECVAKDLPYYLRVIGLAGG CCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHCCCCHHHHHHHCCCEEEEEEECCCC PKKVYAQSMGRETEFYGNVSELTRTGSKVTLSNEIVMPRFGNIFTFNQFKDQQGVLYTVV CHHHHHHHCCCCCHHCCCHHHHHCCCCEEEEECCEECCCCCCEEEECCCCCCCCEEEEEE LHPDGYLVVFDQEQKELWRSNDKFGGSELYYQKDNSENFRITNDKYRWFFMNQRIQVTSR ECCCCEEEEEECHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCEEEEEECCEEEEECC NEVLVGKNDGFWVLGNARSYKKGAVYCFIWNGSNLDELWHTRDTQNYMPDFYFDEASSEL CEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCEEECCCCCCE LLLQTVQRPGLTTRGTASLAIKKVE EEEEECCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MRRFTLAISLLLSLCFTLSVFAAQPLRVFVSDMNVVGVQNKDELKATLQTLLASRLNGEN CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCC ITAVASSAEADAVLTGTYVVIGKVFSVDAMAKSANGKTLTRAFVQGESQDELIPAMGKLA EEEEECCCCCCEEEEEEEEEEEHHHHHHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHH DKLSADLSKLYASGQIASGAPSYAATSTVVRPNKVTQGNSVQSALVRPDQSQEIIRPRDL HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCC ERNYVGGWQSKRLPGAANLLAMGKTLPDGSREVFLAEDRRLSYYHQAENMSLRFATEFGT CCCCCCCCCCCCCCCHHHHHEECCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCC TDKIIGLDTIQGSDGKTEVYLTIMHGEEPSSQIWQVGDNRMECVAKDLPYYLRVIGLAGG CCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHCCCCHHHHHHHCCCEEEEEEECCCC PKKVYAQSMGRETEFYGNVSELTRTGSKVTLSNEIVMPRFGNIFTFNQFKDQQGVLYTVV CHHHHHHHCCCCCHHCCCHHHHHCCCCEEEEECCEECCCCCCEEEECCCCCCCCEEEEEE LHPDGYLVVFDQEQKELWRSNDKFGGSELYYQKDNSENFRITNDKYRWFFMNQRIQVTSR ECCCCEEEEEECHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCEEEEEECCEEEEECC NEVLVGKNDGFWVLGNARSYKKGAVYCFIWNGSNLDELWHTRDTQNYMPDFYFDEASSEL CEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCEEECCCCCCE LLLQTVQRPGLTTRGTASLAIKKVE EEEEECCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA