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The map label for this gene is 118578960

Identifier: 118578960

GI number: 118578960

Start: 552505

End: 553899

Strand: Reverse

Name: 118578960

Synonym: Ppro_0521

Alternate gene names: NA

Gene position: 553899-552505 (Counterclockwise)

Preceding gene: 118578961

Following gene: 118578959

Centisome position: 13.82

GC content: 58.78

Gene sequence:

>1395_bases
ATGAAGTTTAGCAAAACCCTGATGAGCATCACCGCAGCCGGCGCCCTCTGCGCCGCCGCAACCCCGGCCCTGGCCTTTGA
CAACGAGATCCACGGATCCTACCTGATGAAGTACTTCGTCACCAACTACGAGGCTGTCGGTAACCGTTACATCTTCCGCG
ACAGCGACAATGACTTCACCAACTCCCGCAGTAGAAAGACCAGCAACTACTTCGACACTCGCACCCGCTTCTACTACAGC
GCAAAGGCCAGCGACGACCTGAAACTGGTCACTGCCTTCGAGATCGACGCCGTGTTCGGCGACAGAGCACAGCAGACCGC
GCGCAATGGTGGCGCCGCCCTGGAAGCAGACCAGGTCAACCTTGAAACCAAGTGGGTCTACCTGGACTTCAAAATTCCCT
CCACACCGGTCAAGATCACCGCCGGTATCCAGCCGATCAAAGACAAGTTTAAGGGCATCTTCTTCGACGCCGACGTGGCC
GGCATCAACAGCGTGACCACCATGGGTCCGGCGACGATTGGCCTGGGCTACTTCCGCGCCTACGATTCCGACCTTTTCAC
CACCTCCAACGACAACACCAACGCCAGGGGTGTCGACAACCTGGACATCGTGGCCCTCAGTGCCGACTACAACGTCAACA
AGAACCTGCGCGTGGGCGGCGCCTACTACCTGTACAACGACGACCGCAGCGCAAACACACTCACCGTGCACTGCTTCGGC
GCCAACTTCGACGCCAAGATCAACAAACTGGCCCTGAGCGGCTTCGCCGCCATGCAGCAGGGTGAAGTAAAGAACAGTGA
TGTCTCCATTTCCGCCCTGGCCTTCAATCTGGCTGCCAAGCACCCGGTGGGTCCGGGTACCCTGAAAGTTGCCGCCCTCT
ACACAACCGGCGACGACGGCGATAACAACACCAACACCGCCTGGCAGGCTGTCAACCAGTCCCCTAATGGCGCCAACAAC
GGCACCAACGGCAATACGAACATGACCAACTCCTACAACGAGTCGGGCATGATGCTGTTGAACCGCAACACCAGCACCGG
CGGCACCACCACCGACTACCACCTGGTACAGGGCGCCGGCAACCTGGACCAGGGCGTGATCCTGGCAACCATCGGCTATG
ACGCCACCATCAACCCTAAATGGTACGCCAAGACCAACGTGGGCGCTGCCTGGGTTTCCAGCAACAACTCCCAGATGACG
AACCTGAAGACCCATGGTAACAACTTCATAGGTACCGAGATCAATCTTGAGACCGGCTACAAACTGTACGACAACCTGAC
CGCCAGCGTTCAGGGCGCCTATGTGATCCTGGGCGGCTATTACAGCGACATGGACAACGGCCGTGATCCCGCCAACCCCT
TCACCGCCCGTCTGGCGCTGAACTACGCCTTCTAG

Upstream 100 bases:

>100_bases
TGAACCGAAGTAAACAACAGAGCATGGCCTTTGAACAGACAGATAGCAGCACCTGTAGGCAGCACATACATGTAGCATAT
TATCCCGAAGGAGAAAGACC

Downstream 100 bases:

>100_bases
TATCATCTGTACCAGTACAACCTGAAGGGCGGGAGCAATCCCGCCCTTTTTTTTTGACTTTAACAGGCAGTTTTGCGATA
CTCCGCAAGTTGACATCAAG

Product: LamB porin family protein

Products: NA

Alternate protein names: Porin OmpJ; OmpJ-Like Porin

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MKFSKTLMSITAAGALCAAATPALAFDNEIHGSYLMKYFVTNYEAVGNRYIFRDSDNDFTNSRSRKTSNYFDTRTRFYYS
AKASDDLKLVTAFEIDAVFGDRAQQTARNGGAALEADQVNLETKWVYLDFKIPSTPVKITAGIQPIKDKFKGIFFDADVA
GINSVTTMGPATIGLGYFRAYDSDLFTTSNDNTNARGVDNLDIVALSADYNVNKNLRVGGAYYLYNDDRSANTLTVHCFG
ANFDAKINKLALSGFAAMQQGEVKNSDVSISALAFNLAAKHPVGPGTLKVAALYTTGDDGDNNTNTAWQAVNQSPNGANN
GTNGNTNMTNSYNESGMMLLNRNTSTGGTTTDYHLVQGAGNLDQGVILATIGYDATINPKWYAKTNVGAAWVSSNNSQMT
NLKTHGNNFIGTEINLETGYKLYDNLTASVQGAYVILGGYYSDMDNGRDPANPFTARLALNYAF

Sequences:

>Translated_464_residues
MKFSKTLMSITAAGALCAAATPALAFDNEIHGSYLMKYFVTNYEAVGNRYIFRDSDNDFTNSRSRKTSNYFDTRTRFYYS
AKASDDLKLVTAFEIDAVFGDRAQQTARNGGAALEADQVNLETKWVYLDFKIPSTPVKITAGIQPIKDKFKGIFFDADVA
GINSVTTMGPATIGLGYFRAYDSDLFTTSNDNTNARGVDNLDIVALSADYNVNKNLRVGGAYYLYNDDRSANTLTVHCFG
ANFDAKINKLALSGFAAMQQGEVKNSDVSISALAFNLAAKHPVGPGTLKVAALYTTGDDGDNNTNTAWQAVNQSPNGANN
GTNGNTNMTNSYNESGMMLLNRNTSTGGTTTDYHLVQGAGNLDQGVILATIGYDATINPKWYAKTNVGAAWVSSNNSQMT
NLKTHGNNFIGTEINLETGYKLYDNLTASVQGAYVILGGYYSDMDNGRDPANPFTARLALNYAF
>Mature_464_residues
MKFSKTLMSITAAGALCAAATPALAFDNEIHGSYLMKYFVTNYEAVGNRYIFRDSDNDFTNSRSRKTSNYFDTRTRFYYS
AKASDDLKLVTAFEIDAVFGDRAQQTARNGGAALEADQVNLETKWVYLDFKIPSTPVKITAGIQPIKDKFKGIFFDADVA
GINSVTTMGPATIGLGYFRAYDSDLFTTSNDNTNARGVDNLDIVALSADYNVNKNLRVGGAYYLYNDDRSANTLTVHCFG
ANFDAKINKLALSGFAAMQQGEVKNSDVSISALAFNLAAKHPVGPGTLKVAALYTTGDDGDNNTNTAWQAVNQSPNGANN
GTNGNTNMTNSYNESGMMLLNRNTSTGGTTTDYHLVQGAGNLDQGVILATIGYDATINPKWYAKTNVGAAWVSSNNSQMT
NLKTHGNNFIGTEINLETGYKLYDNLTASVQGAYVILGGYYSDMDNGRDPANPFTARLALNYAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50214; Mature: 50214

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSKTLMSITAAGALCAAATPALAFDNEIHGSYLMKYFVTNYEAVGNRYIFRDSDNDFT
CCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCHHHHCCEEEEECCCCCCC
NSRSRKTSNYFDTRTRFYYSAKASDDLKLVTAFEIDAVFGDRAQQTARNGGAALEADQVN
CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEHHCCHHHHHHHCCCCEEEECEEE
LETKWVYLDFKIPSTPVKITAGIQPIKDKFKGIFFDADVAGINSVTTMGPATIGLGYFRA
EEEEEEEEEEECCCCCEEEEECCCHHHHHHCEEEEECCCCCCCCEEECCCHHHCCHHHEE
YDSDLFTTSNDNTNARGVDNLDIVALSADYNVNKNLRVGGAYYLYNDDRSANTLTVHCFG
ECCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEECEEEEEECCCCCCCEEEEEEEC
ANFDAKINKLALSGFAAMQQGEVKNSDVSISALAFNLAAKHPVGPGTLKVAALYTTGDDG
CCCCCEEEEEEEHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCC
DNNTNTAWQAVNQSPNGANNGTNGNTNMTNSYNESGMMLLNRNTSTGGTTTDYHLVQGAG
CCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCC
NLDQGVILATIGYDATINPKWYAKTNVGAAWVSSNNSQMTNLKTHGNNFIGTEINLETGY
CCCCCEEEEEECCCEEECCCEEEECCCCEEEEECCCCEEEEEEECCCEEEEEEEEECCCC
KLYDNLTASVQGAYVILGGYYSDMDNGRDPANPFTARLALNYAF
EEECCEEEECCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKFSKTLMSITAAGALCAAATPALAFDNEIHGSYLMKYFVTNYEAVGNRYIFRDSDNDFT
CCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCHHHHCCEEEEECCCCCCC
NSRSRKTSNYFDTRTRFYYSAKASDDLKLVTAFEIDAVFGDRAQQTARNGGAALEADQVN
CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEHHCCHHHHHHHCCCCEEEECEEE
LETKWVYLDFKIPSTPVKITAGIQPIKDKFKGIFFDADVAGINSVTTMGPATIGLGYFRA
EEEEEEEEEEECCCCCEEEEECCCHHHHHHCEEEEECCCCCCCCEEECCCHHHCCHHHEE
YDSDLFTTSNDNTNARGVDNLDIVALSADYNVNKNLRVGGAYYLYNDDRSANTLTVHCFG
ECCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEECEEEEEECCCCCCCEEEEEEEC
ANFDAKINKLALSGFAAMQQGEVKNSDVSISALAFNLAAKHPVGPGTLKVAALYTTGDDG
CCCCCEEEEEEEHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCC
DNNTNTAWQAVNQSPNGANNGTNGNTNMTNSYNESGMMLLNRNTSTGGTTTDYHLVQGAG
CCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCC
NLDQGVILATIGYDATINPKWYAKTNVGAAWVSSNNSQMTNLKTHGNNFIGTEINLETGY
CCCCCEEEEEECCCEEECCCEEEECCCCEEEEECCCCEEEEEEECCCEEEEEEEEECCCC
KLYDNLTASVQGAYVILGGYYSDMDNGRDPANPFTARLALNYAF
EEECCEEEECCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA