| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118578455
Identifier: 118578455
GI number: 118578455
Start: 8807
End: 10417
Strand: Direct
Name: 118578455
Synonym: Ppro_0006
Alternate gene names: NA
Gene position: 8807-10417 (Clockwise)
Preceding gene: 118578454
Following gene: 118578456
Centisome position: 0.22
GC content: 63.81
Gene sequence:
>1611_bases ATGCCCAGTCCCATGAACAGTACCAATGCCATGAGTAGACTTATTTCCATCGATACCTCCCTGCGGGAACGGCGGCGTAT CATGCGACTGCTGGATTTTCTCACGCGGGACGACCTTTCCACCGACCAGATGGAGCGCATCGGCAGGCGGCTGCAGAAGG CGGGACGGCGGGCGCTTGGTCCGCTGGTGCGCAAGCTGTGGCGCGAGAAGAACGGCACCGCCATCTACCGCTACACCTGC ATGCTGGATTTCTTCGATGACCGGCAGTGGCTGGACCAGCTGGTGCAGATCACCCTCAGACGCACCGACCTGGACGAGCA GGGACGCATGGCGCTCCTGGATGCCCTGCACGACTATGGGGTGGATGTGACCGCCCCCCCCTTCGCCGGCATGACCGGCT ACGGGGCCAGCTCCATGGAGGGGTTCATCGCCGATTGCCTGAAGGATGGCGAACCGGGGCTGGTGCGTTTCATGGACATG TTCCTGGACGCCACCGACGAGGTGCGCGAGCAGATGACCCGGCGCTTGTCGGAGGTGGGCACACCCGATGCGGTGTCGCT GCTGGAGATCCTGATCTCCTTCGAGCGGCCCGAGGTGGTGCGCGAGGCGATCATTGCCCTGGGCAAGATCAAAAACGGCC TGGCCCTGACGGTCCTGACCAGCGCCGAGAAACGGCACGAGGGGGATCTGGCCGACCTGATCAGGCGCAGCATCCGCCGC CTCTCCTTCATGGGAATCCGCCAGCCGGCCCAGCTGCCCCCCTCGTTTCCGGTGCCGCTGCCGCTTTACCAGATCCAGGC CGGACCGGTGGATGTGTACGGCTCGCGGTCGCTTCTGTTCACCTGGGTTCTGGAGGATGGAACCTATGCGGCCCTGCTGC TGTTGATCGGCGAATCCGAGGGGATCATCAACGCTTTAAGCTACCGCATGAAGGATGACCAGGAGTACGACATGGTCCAG CGGGAGGTCACTGCCGGCGAGCTGCTGGATCCGGTGGAGGAGTCCTATGCCATGGCTCTGCTACGGGACGCCCTCTCCAC CAGCCGCAAGCAGGGCTTCTACCTGCCGCCCGACTTCTATGTGGACATGCGGCTGTTCGCTCCCGACTCCCTGCGTTCCG AGGCCTATATCCCCCGTTTCAGTCTGGTCCACCTGGAGGGGATCGTGGAGCGCATACCGGCCTACATCGTCGGCAGCGGC GAGCTGCTGGACACTCCCGCCCTGGAGGGGTGGCTCTTGTCCGAGCCGGCAATGTACGATGCCGCCGAACGTCTGGCCAG CCTGGAGAAGAACGCGCCCGATGGCCGCATCCCTGATGATCAGCTGGAGGCCGAACTGAGCGACTTCTGCGCCCGGCAGA TCGTTCCCCGCCGGGCCGAGATCGTCAAACGCCTGCTTCTGACCGCCGATTTCCTGCAGCAGACCGGCGCCGAAGAGCAG CTTGTTCAGCATACCCTGGCCACGGCGCTCAGCCTGGTGGGTGGATTCGTTCCCGAGTCGCGCCACCCCTTTATCAGGCG CTTGATTATGGATAGTATCGAGACGGCCCGCCAGGCCCTGGCCGACGGGTACGACCTACGATTGGAGGAAGGCTATGACG ACGAAGAATAG
Upstream 100 bases:
>100_bases AGAAGGTGGTGGCCGTTGCCCGCCTGGCCGAGAAGGAAGAGGACGACGAAAACGAGGGAACCGAGTAGGGGCGCCGTCCA CGGCGACCGTGACTCAAACC
Downstream 100 bases:
>100_bases CCCGCTCAGGGTGGCGGTCATCGGCGGCGGAAGCTGGGGTACGGCCCTGGCCAACGTGCTGGCGGGGAATAGCCATGACA CGGTTCTCTGGGTGCATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MPSPMNSTNAMSRLISIDTSLRERRRIMRLLDFLTRDDLSTDQMERIGRRLQKAGRRALGPLVRKLWREKNGTAIYRYTC MLDFFDDRQWLDQLVQITLRRTDLDEQGRMALLDALHDYGVDVTAPPFAGMTGYGASSMEGFIADCLKDGEPGLVRFMDM FLDATDEVREQMTRRLSEVGTPDAVSLLEILISFERPEVVREAIIALGKIKNGLALTVLTSAEKRHEGDLADLIRRSIRR LSFMGIRQPAQLPPSFPVPLPLYQIQAGPVDVYGSRSLLFTWVLEDGTYAALLLLIGESEGIINALSYRMKDDQEYDMVQ REVTAGELLDPVEESYAMALLRDALSTSRKQGFYLPPDFYVDMRLFAPDSLRSEAYIPRFSLVHLEGIVERIPAYIVGSG ELLDTPALEGWLLSEPAMYDAAERLASLEKNAPDGRIPDDQLEAELSDFCARQIVPRRAEIVKRLLLTADFLQQTGAEEQ LVQHTLATALSLVGGFVPESRHPFIRRLIMDSIETARQALADGYDLRLEEGYDDEE
Sequences:
>Translated_536_residues MPSPMNSTNAMSRLISIDTSLRERRRIMRLLDFLTRDDLSTDQMERIGRRLQKAGRRALGPLVRKLWREKNGTAIYRYTC MLDFFDDRQWLDQLVQITLRRTDLDEQGRMALLDALHDYGVDVTAPPFAGMTGYGASSMEGFIADCLKDGEPGLVRFMDM FLDATDEVREQMTRRLSEVGTPDAVSLLEILISFERPEVVREAIIALGKIKNGLALTVLTSAEKRHEGDLADLIRRSIRR LSFMGIRQPAQLPPSFPVPLPLYQIQAGPVDVYGSRSLLFTWVLEDGTYAALLLLIGESEGIINALSYRMKDDQEYDMVQ REVTAGELLDPVEESYAMALLRDALSTSRKQGFYLPPDFYVDMRLFAPDSLRSEAYIPRFSLVHLEGIVERIPAYIVGSG ELLDTPALEGWLLSEPAMYDAAERLASLEKNAPDGRIPDDQLEAELSDFCARQIVPRRAEIVKRLLLTADFLQQTGAEEQ LVQHTLATALSLVGGFVPESRHPFIRRLIMDSIETARQALADGYDLRLEEGYDDEE >Mature_535_residues PSPMNSTNAMSRLISIDTSLRERRRIMRLLDFLTRDDLSTDQMERIGRRLQKAGRRALGPLVRKLWREKNGTAIYRYTCM LDFFDDRQWLDQLVQITLRRTDLDEQGRMALLDALHDYGVDVTAPPFAGMTGYGASSMEGFIADCLKDGEPGLVRFMDMF LDATDEVREQMTRRLSEVGTPDAVSLLEILISFERPEVVREAIIALGKIKNGLALTVLTSAEKRHEGDLADLIRRSIRRL SFMGIRQPAQLPPSFPVPLPLYQIQAGPVDVYGSRSLLFTWVLEDGTYAALLLLIGESEGIINALSYRMKDDQEYDMVQR EVTAGELLDPVEESYAMALLRDALSTSRKQGFYLPPDFYVDMRLFAPDSLRSEAYIPRFSLVHLEGIVERIPAYIVGSGE LLDTPALEGWLLSEPAMYDAAERLASLEKNAPDGRIPDDQLEAELSDFCARQIVPRRAEIVKRLLLTADFLQQTGAEEQL VQHTLATALSLVGGFVPESRHPFIRRLIMDSIETARQALADGYDLRLEEGYDDEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60563; Mature: 60432
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPMNSTNAMSRLISIDTSLRERRRIMRLLDFLTRDDLSTDQMERIGRRLQKAGRRALG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH PLVRKLWREKNGTAIYRYTCMLDFFDDRQWLDQLVQITLRRTDLDEQGRMALLDALHDYG HHHHHHHHCCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC VDVTAPPFAGMTGYGASSMEGFIADCLKDGEPGLVRFMDMFLDATDEVREQMTRRLSEVG CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC TPDAVSLLEILISFERPEVVREAIIALGKIKNGLALTVLTSAEKRHEGDLADLIRRSIRR CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCHHHHHHHHHHH LSFMGIRQPAQLPPSFPVPLPLYQIQAGPVDVYGSRSLLFTWVLEDGTYAALLLLIGESE HHHHCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCEEEEEEEECCCCCEEEHEEECCCC GIINALSYRMKDDQEYDMVQREVTAGELLDPVEESYAMALLRDALSTSRKQGFYLPPDFY CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE VDMRLFAPDSLRSEAYIPRFSLVHLEGIVERIPAYIVGSGELLDTPALEGWLLSEPAMYD EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEECCCCHHHH AAERLASLEKNAPDGRIPDDQLEAELSDFCARQIVPRRAEIVKRLLLTADFLQQTGAEEQ HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH LVQHTLATALSLVGGFVPESRHPFIRRLIMDSIETARQALADGYDLRLEEGYDDEE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC >Mature Secondary Structure PSPMNSTNAMSRLISIDTSLRERRRIMRLLDFLTRDDLSTDQMERIGRRLQKAGRRALG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH PLVRKLWREKNGTAIYRYTCMLDFFDDRQWLDQLVQITLRRTDLDEQGRMALLDALHDYG HHHHHHHHCCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC VDVTAPPFAGMTGYGASSMEGFIADCLKDGEPGLVRFMDMFLDATDEVREQMTRRLSEVG CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC TPDAVSLLEILISFERPEVVREAIIALGKIKNGLALTVLTSAEKRHEGDLADLIRRSIRR CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCHHHHHHHHHHH LSFMGIRQPAQLPPSFPVPLPLYQIQAGPVDVYGSRSLLFTWVLEDGTYAALLLLIGESE HHHHCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCEEEEEEEECCCCCEEEHEEECCCC GIINALSYRMKDDQEYDMVQREVTAGELLDPVEESYAMALLRDALSTSRKQGFYLPPDFY CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE VDMRLFAPDSLRSEAYIPRFSLVHLEGIVERIPAYIVGSGELLDTPALEGWLLSEPAMYD EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEECCCCHHHH AAERLASLEKNAPDGRIPDDQLEAELSDFCARQIVPRRAEIVKRLLLTADFLQQTGAEEQ HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH LVQHTLATALSLVGGFVPESRHPFIRRLIMDSIETARQALADGYDLRLEEGYDDEE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA