| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is tyrA [H]
Identifier: 118478281
GI number: 118478281
Start: 2799425
End: 2800561
Strand: Reverse
Name: tyrA [H]
Synonym: BALH_2642
Alternate gene names: 118478281
Gene position: 2800561-2799425 (Counterclockwise)
Preceding gene: 118478282
Following gene: 118478280
Centisome position: 53.27
GC content: 37.38
Gene sequence:
>1137_bases TTGAAAATAAAAAAAGAAAGTCTCGAGATGAGGCAAATGCGTAAAAAGGTAGTTTTAATTGGAACGGGTTTAATCGGAGG TTCTCTCGCATTAGCAATTAAGAAGGACCACGATGTAACGATAACAGGTTATGATATATTTCAAGAACAAGTAGAGCGCG CAAAAGAATTACACGTAGTAGATGAAATAGCAGTTGATTTACAGCATGCATGTGAAGAGGCACATTTAATTGTTTTTGCT TCTCCAGTTGAAGAAACGAAAAAGCTATTACACAAACTTGCGTCATTCCATTTACGAGAAGATGTTATAGTGACTGATGT TGGTAGTACAAAAGGGTCTATTATGAACGAAGCGGAAGCTTTATTTTCAAAGGAAATTTCTTTCATTGGTGGACATCCGA TGGCAGGTTCTCATAAAACGGGAGTTGAAAGTGCAAAAGCGCATTTATTTGAAAATGCATTTTATATTTTAACACCAATG CATCATGTGCCAAATGAACATGTGGAAGAGTTAAAAGATTGGTTAAAAGGAACAGGGTCACATTTCCTTGTTTTAAATAC AGAAGAACATGATTATGTAACAGGGATCGTTAGTCATTTCCCGCACCTTATCGCAGCAGGTTTAGTGAAGCAAGTAGAGA AACATGCAGGAGATAATCCACTCATTCATCAGCTAGCTGCTGGAGGTTTTAAAGATATTACACGCATTGCATCTAGTAGT CCGAAAATGTGGAGTGATATTGTTAAGCAAAATCGTGAGCATTTAATGGTATTATTAAAAGAGTGGATCTCTGAAATGGA ACATTTATATGATACAGTTTCTAGTGGAGATGCAGGTGAGATTCAAAACTATTTTGCAGACGCGAAAGAATACCGTGATT CTTTACCAGTAAGAAAGAGAGGGGCAATTCCTGCCTATCACGACTTATACGTCGATGTTTTGGATAAAGTAGGGGCATTG GCTCATATTACGAGTATTTTGGCTCGCGAAGAAATTAGTATTACGAACTTGCAAATATTAGAAGCGCGTGAAGGGTTGCT TGGGGTATTACGTATTAGCTTCCAGCGAGAAGAAGATCGTATGAAAGCAAAGCTAGCGCTTGGAGAAGAAAAATACCAAA CTTATGAAACAATTTAA
Upstream 100 bases:
>100_bases CACGCAGGGTTTATTATTCGTCCGTTCCCGAATGGTGTCCGCATCACAGTCGGAACAAGGGAGCAAAATGAAGGAGTGAT TTCAGTGTTACAACAACACT
Downstream 100 bases:
>100_bases ATGAGAAGGTGAAAATGTGAAGGAAAGAATAATACAACCTGTAAATAGCGGATTGAATGGCAATATTACAATCCCGGGTG ATAAGTCCATTTCACACCGC
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKIKKESLEMRQMRKKVVLIGTGLIGGSLALAIKKDHDVTITGYDIFQEQVERAKELHVVDEIAVDLQHACEEAHLIVFA SPVEETKKLLHKLASFHLREDVIVTDVGSTKGSIMNEAEALFSKEISFIGGHPMAGSHKTGVESAKAHLFENAFYILTPM HHVPNEHVEELKDWLKGTGSHFLVLNTEEHDYVTGIVSHFPHLIAAGLVKQVEKHAGDNPLIHQLAAGGFKDITRIASSS PKMWSDIVKQNREHLMVLLKEWISEMEHLYDTVSSGDAGEIQNYFADAKEYRDSLPVRKRGAIPAYHDLYVDVLDKVGAL AHITSILAREEISITNLQILEAREGLLGVLRISFQREEDRMKAKLALGEEKYQTYETI
Sequences:
>Translated_378_residues MKIKKESLEMRQMRKKVVLIGTGLIGGSLALAIKKDHDVTITGYDIFQEQVERAKELHVVDEIAVDLQHACEEAHLIVFA SPVEETKKLLHKLASFHLREDVIVTDVGSTKGSIMNEAEALFSKEISFIGGHPMAGSHKTGVESAKAHLFENAFYILTPM HHVPNEHVEELKDWLKGTGSHFLVLNTEEHDYVTGIVSHFPHLIAAGLVKQVEKHAGDNPLIHQLAAGGFKDITRIASSS PKMWSDIVKQNREHLMVLLKEWISEMEHLYDTVSSGDAGEIQNYFADAKEYRDSLPVRKRGAIPAYHDLYVDVLDKVGAL AHITSILAREEISITNLQILEAREGLLGVLRISFQREEDRMKAKLALGEEKYQTYETI >Mature_378_residues MKIKKESLEMRQMRKKVVLIGTGLIGGSLALAIKKDHDVTITGYDIFQEQVERAKELHVVDEIAVDLQHACEEAHLIVFA SPVEETKKLLHKLASFHLREDVIVTDVGSTKGSIMNEAEALFSKEISFIGGHPMAGSHKTGVESAKAHLFENAFYILTPM HHVPNEHVEELKDWLKGTGSHFLVLNTEEHDYVTGIVSHFPHLIAAGLVKQVEKHAGDNPLIHQLAAGGFKDITRIASSS PKMWSDIVKQNREHLMVLLKEWISEMEHLYDTVSSGDAGEIQNYFADAKEYRDSLPVRKRGAIPAYHDLYVDVLDKVGAL AHITSILAREEISITNLQILEAREGLLGVLRISFQREEDRMKAKLALGEEKYQTYETI
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 42408; Mature: 42408
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKKESLEMRQMRKKVVLIGTGLIGGSLALAIKKDHDVTITGYDIFQEQVERAKELHVV CCCCHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH DEIAVDLQHACEEAHLIVFASPVEETKKLLHKLASFHLREDVIVTDVGSTKGSIMNEAEA HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH LFSKEISFIGGHPMAGSHKTGVESAKAHLFENAFYILTPMHHVPNEHVEELKDWLKGTGS HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECHHHCCHHHHHHHHHHHHCCCC HFLVLNTEEHDYVTGIVSHFPHLIAAGLVKQVEKHAGDNPLIHQLAAGGFKDITRIASSS EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCC PKMWSDIVKQNREHLMVLLKEWISEMEHLYDTVSSGDAGEIQNYFADAKEYRDSLPVRKR CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC GAIPAYHDLYVDVLDKVGALAHITSILAREEISITNLQILEAREGLLGVLRISFQREEDR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MKAKLALGEEKYQTYETI HHHHHHCCHHHHHHHCCC >Mature Secondary Structure MKIKKESLEMRQMRKKVVLIGTGLIGGSLALAIKKDHDVTITGYDIFQEQVERAKELHVV CCCCHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH DEIAVDLQHACEEAHLIVFASPVEETKKLLHKLASFHLREDVIVTDVGSTKGSIMNEAEA HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH LFSKEISFIGGHPMAGSHKTGVESAKAHLFENAFYILTPMHHVPNEHVEELKDWLKGTGS HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECHHHCCHHHHHHHHHHHHCCCC HFLVLNTEEHDYVTGIVSHFPHLIAAGLVKQVEKHAGDNPLIHQLAAGGFKDITRIASSS EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCC PKMWSDIVKQNREHLMVLLKEWISEMEHLYDTVSSGDAGEIQNYFADAKEYRDSLPVRKR CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC GAIPAYHDLYVDVLDKVGALAHITSILAREEISITNLQILEAREGLLGVLRISFQREEDR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MKAKLALGEEKYQTYETI HHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3106153; 9384377 [H]