Click here to switch to the map view.

The map label for this gene is 117921878

Identifier: 117921878

GI number: 117921878

Start: 4123590

End: 4124747

Strand: Direct

Name: 117921878

Synonym: Shewana3_3441

Alternate gene names: NA

Gene position: 4123590-4124747 (Clockwise)

Preceding gene: 117921876

Following gene: 117921879

Centisome position: 82.93

GC content: 51.99

Gene sequence:

>1158_bases
ATGTTAAAGCCAAGCCTCGTTTTTATCCTCGCCAGCACAGTGGCGCAAACCGCAGGTGCAGTACAACTCCTAGGAGATGT
GGAAGTTTCCCGCATTCCCACTGCAGAAAAAACCATGGCAGAAGTGGTCTACCGCTATCAAGCCTTGGACGAAGGCTTGG
CGACTCAGCTTTCCGCACAGAAGAATGAACGCGATGCAACCCAACTTGCCGCTCGTCAGGGGCATAGACTGTGGCAACAG
GCGGTGCGTGATGTGCAGTCAGGGCACTTTGACGACAGATCCCTCTACTGGGCTCGGCTCTCAATGTTAAATAGCATCAA
GAGCAATCGCGCCAATTTCAAAATGGCCGATTGGCAACAGAATATTTTAGCCAGCGCAGTCGAAAAGGCATCTCGCGGTT
TTAGCGATATCCAATACGGCGACGATGTGCAGATAAAAATCTTCCTGACGGGATTCGACCCTTTCTTCCTCGATAAAGAC
ATCAGCCAGAGCAATCCCTCGGGCTTGGTCGCCCTTGCCCTCGATGGTTTTAGATTTGATATCAACGGCAAAAAAGCCCA
AATCGAAACCGCGATGATCCCAGTGCGCTTCGAGGATTTTGATCAAGGCATTATCGAGTCGCTACTTAGCCCGATTTACC
GCGATCCTAAAACCCAGTTTGTCTTTACCGTCAGCATGGGCCGCAGTGACTTTGATATTGAACGCTTCCCCGGCCGTAAC
CGTAGCGCCGCCGCGCCGGATAACCAAAATCTGTACACAGGCGGAAGCAAAACCGCGCCTGTCGCCCCCAAACTCAATGG
TAAAGACTTTATCGGCCCAGAGTTTGTTGAGTTTTCACTGCCCGTTGCCGCCATGCAGGTCAAAGACGGCCAATGGAAAG
TCAACGACAACCATACAGTGACCACACTAGCGCGCGGTGAATTTAATGCCAGCTCCCTAAGCGAGCTGCAAAATGAAACC
TCGGTCGAAGGTTCTGGTGGTGGCTATCTCTCAAACGAGATTTCTTATCGCGCCATTGTGTTACAGCAAAAGTTCAACAG
CCCAGCCAAGGTCGGCCATATCCACACCCCAAGGGTGAAGGGCTACGACAACGCCACCGAACAAGCGATTGTCGAGCAAG
TGCGTACTATGGTGATGCAGGCCACAGCGAGCCTGTAA

Upstream 100 bases:

>100_bases
GCATAAGTTACATCCTCTCTAGGATGAAGCAAACCCAAACGCCTTAGGAACATCGCCCTTTTCCAGCAAAATAAGTGATT
AAAATAAAAAGGAAACGCCA

Downstream 100 bases:

>100_bases
CAGTCGCAATACTGGCATTGTCAGCAAGCGTTCGTTATGATGCGAACGCTTGCAAGTCGCCTTGAATGAGGGCTCTGAGC
ATAAGAGCTTTGAACTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLKPSLVFILASTVAQTAGAVQLLGDVEVSRIPTAEKTMAEVVYRYQALDEGLATQLSAQKNERDATQLAARQGHRLWQQ
AVRDVQSGHFDDRSLYWARLSMLNSIKSNRANFKMADWQQNILASAVEKASRGFSDIQYGDDVQIKIFLTGFDPFFLDKD
ISQSNPSGLVALALDGFRFDINGKKAQIETAMIPVRFEDFDQGIIESLLSPIYRDPKTQFVFTVSMGRSDFDIERFPGRN
RSAAAPDNQNLYTGGSKTAPVAPKLNGKDFIGPEFVEFSLPVAAMQVKDGQWKVNDNHTVTTLARGEFNASSLSELQNET
SVEGSGGGYLSNEISYRAIVLQQKFNSPAKVGHIHTPRVKGYDNATEQAIVEQVRTMVMQATASL

Sequences:

>Translated_385_residues
MLKPSLVFILASTVAQTAGAVQLLGDVEVSRIPTAEKTMAEVVYRYQALDEGLATQLSAQKNERDATQLAARQGHRLWQQ
AVRDVQSGHFDDRSLYWARLSMLNSIKSNRANFKMADWQQNILASAVEKASRGFSDIQYGDDVQIKIFLTGFDPFFLDKD
ISQSNPSGLVALALDGFRFDINGKKAQIETAMIPVRFEDFDQGIIESLLSPIYRDPKTQFVFTVSMGRSDFDIERFPGRN
RSAAAPDNQNLYTGGSKTAPVAPKLNGKDFIGPEFVEFSLPVAAMQVKDGQWKVNDNHTVTTLARGEFNASSLSELQNET
SVEGSGGGYLSNEISYRAIVLQQKFNSPAKVGHIHTPRVKGYDNATEQAIVEQVRTMVMQATASL
>Mature_385_residues
MLKPSLVFILASTVAQTAGAVQLLGDVEVSRIPTAEKTMAEVVYRYQALDEGLATQLSAQKNERDATQLAARQGHRLWQQ
AVRDVQSGHFDDRSLYWARLSMLNSIKSNRANFKMADWQQNILASAVEKASRGFSDIQYGDDVQIKIFLTGFDPFFLDKD
ISQSNPSGLVALALDGFRFDINGKKAQIETAMIPVRFEDFDQGIIESLLSPIYRDPKTQFVFTVSMGRSDFDIERFPGRN
RSAAAPDNQNLYTGGSKTAPVAPKLNGKDFIGPEFVEFSLPVAAMQVKDGQWKVNDNHTVTTLARGEFNASSLSELQNET
SVEGSGGGYLSNEISYRAIVLQQKFNSPAKVGHIHTPRVKGYDNATEQAIVEQVRTMVMQATASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42544; Mature: 42544

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPSLVFILASTVAQTAGAVQLLGDVEVSRIPTAEKTMAEVVYRYQALDEGLATQLSAQ
CCCCHHHHHHHHHHHHHCCHHEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KNERDATQLAARQGHRLWQQAVRDVQSGHFDDRSLYWARLSMLNSIKSNRANFKMADWQQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHH
NILASAVEKASRGFSDIQYGDDVQIKIFLTGFDPFFLDKDISQSNPSGLVALALDGFRFD
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCEEEEEECCEEEE
INGKKAQIETAMIPVRFEDFDQGIIESLLSPIYRDPKTQFVFTVSMGRSDFDIERFPGRN
ECCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCC
RSAAAPDNQNLYTGGSKTAPVAPKLNGKDFIGPEFVEFSLPVAAMQVKDGQWKVNDNHTV
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCEEEECCCCEE
TTLARGEFNASSLSELQNETSVEGSGGGYLSNEISYRAIVLQQKFNSPAKVGHIHTPRVK
EEEECCCCCHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEEHHCCCCCCCCCCCCCCCC
GYDNATEQAIVEQVRTMVMQATASL
CCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKPSLVFILASTVAQTAGAVQLLGDVEVSRIPTAEKTMAEVVYRYQALDEGLATQLSAQ
CCCCHHHHHHHHHHHHHCCHHEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KNERDATQLAARQGHRLWQQAVRDVQSGHFDDRSLYWARLSMLNSIKSNRANFKMADWQQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHH
NILASAVEKASRGFSDIQYGDDVQIKIFLTGFDPFFLDKDISQSNPSGLVALALDGFRFD
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCCCEEEEEECCEEEE
INGKKAQIETAMIPVRFEDFDQGIIESLLSPIYRDPKTQFVFTVSMGRSDFDIERFPGRN
ECCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCC
RSAAAPDNQNLYTGGSKTAPVAPKLNGKDFIGPEFVEFSLPVAAMQVKDGQWKVNDNHTV
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCEEEECCCCEE
TTLARGEFNASSLSELQNETSVEGSGGGYLSNEISYRAIVLQQKFNSPAKVGHIHTPRVK
EEEECCCCCHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEEHHCCCCCCCCCCCCCCCC
GYDNATEQAIVEQVRTMVMQATASL
CCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]