Click here to switch to the map view.

The map label for this gene is sprT [H]

Identifier: 117921879

GI number: 117921879

Start: 4124928

End: 4125533

Strand: Direct

Name: sprT [H]

Synonym: Shewana3_3442

Alternate gene names: 117921879

Gene position: 4124928-4125533 (Clockwise)

Preceding gene: 117921878

Following gene: 117921880

Centisome position: 82.96

GC content: 51.98

Gene sequence:

>606_bases
ATGTTTAACCAGAGATCCCTACTTAATAGCCTGCGCCGTAAAGCCATCTCATCCACGAGTATCACCTCAGCAACGGCGGC
TAACTCGGCCACGCCACAACGCCAGCCAAAGCCGCTGACACCCCTGCAGCAACAAATTCTGGTACGCATCGAAGACTGTT
ACCAGCAGGCGGAAATCTACTTTAAGCGTCCATTTGCGCGGCCGCTGACCCAATTTACTCTGCGGGGACGGAGTGCGGGC
ACGGCCCATTTACAACAGAATCGCCTGCGATTTAATCCCGTATTGCTCAGGGAAAATAGCGAAGCCTTTTTAGCCGAAGT
AGTGCCCCACGAAATCAGCCATTTGCTCTGTTTCCAACTGTTTGGCAAAACCAAGCCCCATGGCCGCGAGTGGCAATCCA
TCATGCTCAAGCTGTTTAAGGTGAGCCCCAATACCACCCACAGTTTCGATACTCAATCGGTTAAAGGGAAAGACTTTGAG
TACCGCTGTGCCTGCGGTCCGGTTAAGCTGAGCATCCGTCGCCATAATAAAGTGTTACGTGGTGAAACCCGTTATCTATG
CAAACGCTGCCATACCCACCTCACCTTTATCGAAGCCGCCGAATAA

Upstream 100 bases:

>100_bases
ATAAGAGCTTTGAACTCAGCAAATCGTAATAGATGTCGTGCGATAGCTAGATGAGTTGTTTAATTGATGCTTTGCAAAAT
AAGAGTTAACGCCTAAGTCT

Downstream 100 bases:

>100_bases
TCCGCCATACACCAAATCCTTGGCCAAAAGTACGAGCGATTTGCATAAGGCGCGCTATTTCCCTTACCATTCAGGCATAA
GAGACGAGCCACAGGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MFNQRSLLNSLRRKAISSTSITSATAANSATPQRQPKPLTPLQQQILVRIEDCYQQAEIYFKRPFARPLTQFTLRGRSAG
TAHLQQNRLRFNPVLLRENSEAFLAEVVPHEISHLLCFQLFGKTKPHGREWQSIMLKLFKVSPNTTHSFDTQSVKGKDFE
YRCACGPVKLSIRRHNKVLRGETRYLCKRCHTHLTFIEAAE

Sequences:

>Translated_201_residues
MFNQRSLLNSLRRKAISSTSITSATAANSATPQRQPKPLTPLQQQILVRIEDCYQQAEIYFKRPFARPLTQFTLRGRSAG
TAHLQQNRLRFNPVLLRENSEAFLAEVVPHEISHLLCFQLFGKTKPHGREWQSIMLKLFKVSPNTTHSFDTQSVKGKDFE
YRCACGPVKLSIRRHNKVLRGETRYLCKRCHTHLTFIEAAE
>Mature_201_residues
MFNQRSLLNSLRRKAISSTSITSATAANSATPQRQPKPLTPLQQQILVRIEDCYQQAEIYFKRPFARPLTQFTLRGRSAG
TAHLQQNRLRFNPVLLRENSEAFLAEVVPHEISHLLCFQLFGKTKPHGREWQSIMLKLFKVSPNTTHSFDTQSVKGKDFE
YRCACGPVKLSIRRHNKVLRGETRYLCKRCHTHLTFIEAAE

Specific function: Involved In Bola Gene Expression At The Stationary Phase. [C]

COG id: COG3091

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sprT family [H]

Homologues:

Organism=Escherichia coli, GI1789313, Length=154, Percent_Identity=45.4545454545455, Blast_Score=151, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006640 [H]

Pfam domain/function: PF10263 SprT-like [H]

EC number: NA

Molecular weight: Translated: 23166; Mature: 23166

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNQRSLLNSLRRKAISSTSITSATAANSATPQRQPKPLTPLQQQILVRIEDCYQQAEIY
CCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FKRPFARPLTQFTLRGRSAGTAHLQQNRLRFNPVLLRENSEAFLAEVVPHEISHLLCFQL
HHCCCHHHHHHHHHCCCCCCHHHHHHCCEECCEEEEECCCHHHHHHHHHHHHHHHHHHHH
FGKTKPHGREWQSIMLKLFKVSPNTTHSFDTQSVKGKDFEYRCACGPVKLSIRRHNKVLR
HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEHHHHCHHHC
GETRYLCKRCHTHLTFIEAAE
CHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MFNQRSLLNSLRRKAISSTSITSATAANSATPQRQPKPLTPLQQQILVRIEDCYQQAEIY
CCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FKRPFARPLTQFTLRGRSAGTAHLQQNRLRFNPVLLRENSEAFLAEVVPHEISHLLCFQL
HHCCCHHHHHHHHHCCCCCCHHHHHHCCEECCEEEEECCCHHHHHHHHHHHHHHHHHHHH
FGKTKPHGREWQSIMLKLFKVSPNTTHSFDTQSVKGKDFEYRCACGPVKLSIRRHNKVLR
HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEHHHHCHHHC
GETRYLCKRCHTHLTFIEAAE
CHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]