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The map label for this gene is yjjB [C]

Identifier: 117921653

GI number: 117921653

Start: 3859343

End: 3859816

Strand: Reverse

Name: yjjB [C]

Synonym: Shewana3_3215

Alternate gene names: 117921653

Gene position: 3859816-3859343 (Counterclockwise)

Preceding gene: 117921654

Following gene: 117921652

Centisome position: 77.63

GC content: 51.48

Gene sequence:

>474_bases
ATGATCGCCTTACTGTGGACGCTATTGCACGATGCCTTTTTCTCAGCAATTCCCGCTGTCGGCTTTGCCATGGTGTTTAA
CGTGCCGAAACGTTTCTTACCCTACTGCGCGCTTGCAGGCGCTATAGGGCATAGCTCACGCACGCTAATGTTGCAATTTG
GCTTGCCTATCGAATGGGCGACCTTTGCCGCCGCGGCTTTAGTGGGAACTATCACTATCGGCTTTGCCAAGCGTCACCTC
GCGCCGCCCTTGATGTATGCCGTTGCGGCGATTATCCCGATGATCCCTGGCACCTACGCTTTTAATACTGTAATAGCCCT
AGTGCAATTAACGGCGCAGTCGCAGGTCAGCCAAGAACTGACTGGACAAGTGATCAGTAACGGCTTAAAAACCGTGTTTA
TTTTAGGCGCGCTGTCGGTGGGCCTTGCTTTACCTAGTCTGCTGTATTTTAGAACCCGCCCTGTTATTCAATAA

Upstream 100 bases:

>100_bases
ATATGAACGTGGGGATTTCCCGCTGGGGCCATGCCACCTTGCTTACTGTGTCGTCCGTTATTGGCATTACGATTGCGATG
CAGCTAGGGGGGATCTTCCT

Downstream 100 bases:

>100_bases
AAACAATACCAAAGGAGTGCCCATGCGCATTGCTATGATAGCCGCGATGGCAAACAATCGAGTCATTGGAAAAGACAACA
AAATGCCATGGCATCTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MIALLWTLLHDAFFSAIPAVGFAMVFNVPKRFLPYCALAGAIGHSSRTLMLQFGLPIEWATFAAAALVGTITIGFAKRHL
APPLMYAVAAIIPMIPGTYAFNTVIALVQLTAQSQVSQELTGQVISNGLKTVFILGALSVGLALPSLLYFRTRPVIQ

Sequences:

>Translated_157_residues
MIALLWTLLHDAFFSAIPAVGFAMVFNVPKRFLPYCALAGAIGHSSRTLMLQFGLPIEWATFAAAALVGTITIGFAKRHL
APPLMYAVAAIIPMIPGTYAFNTVIALVQLTAQSQVSQELTGQVISNGLKTVFILGALSVGLALPSLLYFRTRPVIQ
>Mature_157_residues
MIALLWTLLHDAFFSAIPAVGFAMVFNVPKRFLPYCALAGAIGHSSRTLMLQFGLPIEWATFAAAALVGTITIGFAKRHL
APPLMYAVAAIIPMIPGTYAFNTVIALVQLTAQSQVSQELTGQVISNGLKTVFILGALSVGLALPSLLYFRTRPVIQ

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0442 family [H]

Homologues:

Organism=Escherichia coli, GI145693219, Length=153, Percent_Identity=48.3660130718954, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619
- InterPro:   IPR020914 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 16803; Mature: 16803

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALLWTLLHDAFFSAIPAVGFAMVFNVPKRFLPYCALAGAIGHSSRTLMLQFGLPIEWA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHH
TFAAAALVGTITIGFAKRHLAPPLMYAVAAIIPMIPGTYAFNTVIALVQLTAQSQVSQEL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TGQVISNGLKTVFILGALSVGLALPSLLYFRTRPVIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIALLWTLLHDAFFSAIPAVGFAMVFNVPKRFLPYCALAGAIGHSSRTLMLQFGLPIEWA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHH
TFAAAALVGTITIGFAKRHLAPPLMYAVAAIIPMIPGTYAFNTVIALVQLTAQSQVSQEL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TGQVISNGLKTVFILGALSVGLALPSLLYFRTRPVIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA