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The map label for this gene is yjjP [H]

Identifier: 117921654

GI number: 117921654

Start: 3859813

End: 3860574

Strand: Reverse

Name: yjjP [H]

Synonym: Shewana3_3216

Alternate gene names: 117921654

Gene position: 3860574-3859813 (Counterclockwise)

Preceding gene: 117921655

Following gene: 117921653

Centisome position: 77.64

GC content: 50.52

Gene sequence:

>762_bases
GTGTACGCAGATACTCAAAATGATATTACTCGGCAGGTTGTGCGTGTCGCACAACTGCTACTGGCCTACGGTGCTGAATC
TGATTTAGTTGAAGAAATCAGTCAGCGCCTAGGTCAGGCCTTAGGATTGGCAAGTGTTGAGCTTTCCATCTCCTCTAATT
CCCTCGTGTTAACCAGTTTAGTGCATGGTCGCTGTATCACGACGACGCGTCGGATCCGCGAGCATGGCATCAATATGACC
ATAGTCTGCGAGTTACAGCGCATCTGTTTATTGACGGAAAAAGGTCTCTATGGCCCCAACGAAGTGCGTAAACGCTTAGC
GCGAATCGAACCTAAGACCTACCCGCCGTATCTCGTGATCTTGATGATAGGCCTGTCCTGCGCAAGCTTCTGTCATCTAT
TTAATGGCGATGTCGCCGCATCAATCATCACTTTTTTTGCCTCTGCAGTAGGGATGTCGGTGCGCCTTGCGATCGCCAAG
CGGCATTTTAATTTGCTGGTTAATTTTGCGGTGACGGCATTTGTCACTAGCTTATTGGCGCAGACGGGTTATGTGTTTAA
CTTGAGTGAGACCCCGCAGGCGGCCATGGCGGCCAGTGTGTTGATGTTGGTGCCGGGGTTTCCGATGATCAATGCGATTT
CTGATATGGTCAAAGGCCATATGAACGTGGGGATTTCCCGCTGGGGCCATGCCACCTTGCTTACTGTGTCGTCCGTTATT
GGCATTACGATTGCGATGCAGCTAGGGGGGATCTTCCTATGA

Upstream 100 bases:

>100_bases
AGACTATGACGATGAATTCGACGATGACTTTGATGATGACGACTACGATGTAGAAGTGATCTACCAAAGATAATATCCCA
ACCTAAGTTTTGAGAGTCCC

Downstream 100 bases:

>100_bases
TCGCCTTACTGTGGACGCTATTGCACGATGCCTTTTTCTCAGCAATTCCCGCTGTCGGCTTTGCCATGGTGTTTAACGTG
CCGAAACGTTTCTTACCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGQALGLASVELSISSNSLVLTSLVHGRCITTTRRIREHGINMT
IVCELQRICLLTEKGLYGPNEVRKRLARIEPKTYPPYLVILMIGLSCASFCHLFNGDVAASIITFFASAVGMSVRLAIAK
RHFNLLVNFAVTAFVTSLLAQTGYVFNLSETPQAAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVSSVI
GITIAMQLGGIFL

Sequences:

>Translated_253_residues
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGQALGLASVELSISSNSLVLTSLVHGRCITTTRRIREHGINMT
IVCELQRICLLTEKGLYGPNEVRKRLARIEPKTYPPYLVILMIGLSCASFCHLFNGDVAASIITFFASAVGMSVRLAIAK
RHFNLLVNFAVTAFVTSLLAQTGYVFNLSETPQAAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVSSVI
GITIAMQLGGIFL
>Mature_253_residues
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGQALGLASVELSISSNSLVLTSLVHGRCITTTRRIREHGINMT
IVCELQRICLLTEKGLYGPNEVRKRLARIEPKTYPPYLVILMIGLSCASFCHLFNGDVAASIITFFASAVGMSVRLAIAK
RHFNLLVNFAVTAFVTSLLAQTGYVFNLSETPQAAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVSSVI
GITIAMQLGGIFL

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=254, Percent_Identity=47.6377952755905, Blast_Score=245, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 27445; Mature: 27445

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGQALGLASVELSISSNSLVLTSL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEEEEECCCCEEEHHH
VHGRCITTTRRIREHGINMTIVCELQRICLLTEKGLYGPNEVRKRLARIEPKTYPPYLVI
HCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHH
LMIGLSCASFCHLFNGDVAASIITFFASAVGMSVRLAIAKRHFNLLVNFAVTAFVTSLLA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTGYVFNLSETPQAAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVSSVI
HCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
GITIAMQLGGIFL
HHHHHHHHCCCCC
>Mature Secondary Structure
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGQALGLASVELSISSNSLVLTSL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEEEEECCCCEEEHHH
VHGRCITTTRRIREHGINMTIVCELQRICLLTEKGLYGPNEVRKRLARIEPKTYPPYLVI
HCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHH
LMIGLSCASFCHLFNGDVAASIITFFASAVGMSVRLAIAKRHFNLLVNFAVTAFVTSLLA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTGYVFNLSETPQAAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVSSVI
HCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
GITIAMQLGGIFL
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]