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The map label for this gene is yvbT [H]

Identifier: 117921528

GI number: 117921528

Start: 3706474

End: 3707523

Strand: Direct

Name: yvbT [H]

Synonym: Shewana3_3090

Alternate gene names: 117921528

Gene position: 3706474-3707523 (Clockwise)

Preceding gene: 117921527

Following gene: 117921539

Centisome position: 74.54

GC content: 53.9

Gene sequence:

>1050_bases
ATGGCTATATCATCGACTTCAACATCTGCCACCCCATCGCAGGCAGTGACTAAATCTCCCCTAGCGGATATTCCCTTTTC
ACTCTTAGAGCTCGCCCCCGTACGCCAAGGCGCGAGCATCGGAGACACGCTACGCGCCAGCCTACAATACGCTAAGGTGG
CCGATGACTTAGGTTTTAATCGATTCTGGTTTGCCGAGCACCACAATATGCCCGGTATCGCCAGCGCCGCGACATCGGTG
TTAATTGGCTATATTGCCGAGAATACTAAACGCATTCGCGTCGGCGCGGGTGGGATTATGCTGCCCAACCATGCGCCCTT
AGTGGTTGCCGAGCAGTTTGGTACACTCGAAAGCCTTTATCCTGGTCGTATCGATTTAGGACTTGGCCGCGCACCGGGCA
GCGATCAAATCACCAGCCGCGCCCTTAACCGCGATATGAGCCGCGCGGAGCAATTTCCCGCCGAGGTGAGCGAGTTACAA
ACCTTACTCGGCGACTACAATGGCCGTCATCCCGTAAGAGCGATTCCCGGCGAAGGCACCCATGTGCCGATTTGGCTACT
CGGCTCTAGCCTCTTTAGCGCCCAGCTTGCGGCACAGCGCGGCTTACCCTATGTCTTTGCAGGGCATTTTGCGCCCAGAT
TCCTCTACGATGCGATAGAGATTTACCGCCGCGACTTTAAGCCATCTAAGGTGTTGGATAAGCCCTATGTCATGCTTGGC
CTGCCACTTATCGCCGCCGAGACAGACGCCGAAGCAGAATACTTAAGCACCACCTCCAAGCAACGGGTGCTTGCGCTGAT
CCGTGGTGAACCGCTTTGGTTAAAACCGCCCGTAGACAGCATGGATGGCCTGTGGAGCGAGCAGGAAAAAACCTATGTCG
ATAACTTCTTAGGCTTATCCGTCACCGGTGGCCCCACCAGCATCAAACACCGCTTAGAGATGATAGTGAAGGAGTTAGGT
GTCGATGAGTTTATCTTTACCAACGATTTGTATGATCAGGACAAACGTGAGCGAGCGCTGCAAATCCTAATGGAGATAAA
AGGCTCTTAA

Upstream 100 bases:

>100_bases
ACTAACAGAGCAATCGCTTTAGCACCCACCACATTCATCCGTGTGAGGCCAAATAAAGCCGCTGCCACAGAGCTGACTCA
CGCAAAGAGGCGCTTAATTT

Downstream 100 bases:

>100_bases
GCGTTAAACCACGCCATAAAAAATCCCGCCTAAGCGGGATTTTTTATATCTGTTAACCTTTTAACACGGCATCGAAGCAG
GACTTAAGAATGCCCAGCCC

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAISSTSTSATPSQAVTKSPLADIPFSLLELAPVRQGASIGDTLRASLQYAKVADDLGFNRFWFAEHHNMPGIASAATSV
LIGYIAENTKRIRVGAGGIMLPNHAPLVVAEQFGTLESLYPGRIDLGLGRAPGSDQITSRALNRDMSRAEQFPAEVSELQ
TLLGDYNGRHPVRAIPGEGTHVPIWLLGSSLFSAQLAAQRGLPYVFAGHFAPRFLYDAIEIYRRDFKPSKVLDKPYVMLG
LPLIAAETDAEAEYLSTTSKQRVLALIRGEPLWLKPPVDSMDGLWSEQEKTYVDNFLGLSVTGGPTSIKHRLEMIVKELG
VDEFIFTNDLYDQDKRERALQILMEIKGS

Sequences:

>Translated_349_residues
MAISSTSTSATPSQAVTKSPLADIPFSLLELAPVRQGASIGDTLRASLQYAKVADDLGFNRFWFAEHHNMPGIASAATSV
LIGYIAENTKRIRVGAGGIMLPNHAPLVVAEQFGTLESLYPGRIDLGLGRAPGSDQITSRALNRDMSRAEQFPAEVSELQ
TLLGDYNGRHPVRAIPGEGTHVPIWLLGSSLFSAQLAAQRGLPYVFAGHFAPRFLYDAIEIYRRDFKPSKVLDKPYVMLG
LPLIAAETDAEAEYLSTTSKQRVLALIRGEPLWLKPPVDSMDGLWSEQEKTYVDNFLGLSVTGGPTSIKHRLEMIVKELG
VDEFIFTNDLYDQDKRERALQILMEIKGS
>Mature_348_residues
AISSTSTSATPSQAVTKSPLADIPFSLLELAPVRQGASIGDTLRASLQYAKVADDLGFNRFWFAEHHNMPGIASAATSVL
IGYIAENTKRIRVGAGGIMLPNHAPLVVAEQFGTLESLYPGRIDLGLGRAPGSDQITSRALNRDMSRAEQFPAEVSELQT
LLGDYNGRHPVRAIPGEGTHVPIWLLGSSLFSAQLAAQRGLPYVFAGHFAPRFLYDAIEIYRRDFKPSKVLDKPYVMLGL
PLIAAETDAEAEYLSTTSKQRVLALIRGEPLWLKPPVDSMDGLWSEQEKTYVDNFLGLSVTGGPTSIKHRLEMIVKELGV
DEFIFTNDLYDQDKRERALQILMEIKGS

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=325, Percent_Identity=49.8461538461538, Blast_Score=335, Evalue=3e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 38272; Mature: 38141

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISSTSTSATPSQAVTKSPLADIPFSLLELAPVRQGASIGDTLRASLQYAKVADDLGFN
CCCCCCCCCCCCHHHHHCCCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
RFWFAEHHNMPGIASAATSVLIGYIAENTKRIRVGAGGIMLPNHAPLVVAEQFGTLESLY
EEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCEEEEHHHCCHHHCC
PGRIDLGLGRAPGSDQITSRALNRDMSRAEQFPAEVSELQTLLGDYNGRHPVRAIPGEGT
CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEECCCCCC
HVPIWLLGSSLFSAQLAAQRGLPYVFAGHFAPRFLYDAIEIYRRDFKPSKVLDKPYVMLG
EEEEEECCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEC
LPLIAAETDAEAEYLSTTSKQRVLALIRGEPLWLKPPVDSMDGLWSEQEKTYVDNFLGLS
CCEEEECCCCCHHHHHHCHHHHHHHEECCCCEEECCCCCHHHCCCCHHHHHHHHHHCEEE
VTGGPTSIKHRLEMIVKELGVDEFIFTNDLYDQDKRERALQILMEIKGS
ECCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AISSTSTSATPSQAVTKSPLADIPFSLLELAPVRQGASIGDTLRASLQYAKVADDLGFN
CCCCCCCCCCCHHHHHCCCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
RFWFAEHHNMPGIASAATSVLIGYIAENTKRIRVGAGGIMLPNHAPLVVAEQFGTLESLY
EEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCEEEEHHHCCHHHCC
PGRIDLGLGRAPGSDQITSRALNRDMSRAEQFPAEVSELQTLLGDYNGRHPVRAIPGEGT
CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEECCCCCC
HVPIWLLGSSLFSAQLAAQRGLPYVFAGHFAPRFLYDAIEIYRRDFKPSKVLDKPYVMLG
EEEEEECCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEC
LPLIAAETDAEAEYLSTTSKQRVLALIRGEPLWLKPPVDSMDGLWSEQEKTYVDNFLGLS
CCEEEECCCCCHHHHHHCHHHHHHHEECCCCEEECCCCCHHHCCCCHHHHHHHHHHCEEE
VTGGPTSIKHRLEMIVKELGVDEFIFTNDLYDQDKRERALQILMEIKGS
ECCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]