| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is ptsP [H]
Identifier: 117921481
GI number: 117921481
Start: 3645655
End: 3647889
Strand: Reverse
Name: ptsP [H]
Synonym: Shewana3_3042
Alternate gene names: 117921481
Gene position: 3647889-3645655 (Counterclockwise)
Preceding gene: 117921482
Following gene: 117921480
Centisome position: 73.37
GC content: 51.59
Gene sequence:
>2235_bases GTGTTAAATACGCTCAGGGATATTACTCAAGCTGTGGCGTCCGCCCACAGCTTAGAAACCGCATTAGAAGTCCTAGTTTC ATCGACCAAAGCGGCGATGGAAACCCAATGTTGCTCGGTCTACATCCTAGATCAGCAAGAACTCGTATTATCAGCCACCG ATGGCCTCGAAAAGAGTGCCGTTGGGCGCGTGCGCATGCCGTTAACCCAAGGCTTGGTTGGCTTGGCCGCCGAACGTGAA GAAGCCGTAAACCTTGCTGATGCGCGTTTGCACCCACGCTTTAAGCTCTTCCCCGAAGTTGCTGAAGAAGAATACCGTGC CTTTTTAGCCGTCCCCATTATTTATCAAAAAGCCGTCGTCGGCGTAATTGTGGTGCAGCAGGCCAGCGCGCGGCAATTTA GCGAAGGGGAAGAAGCCTTCTTAATGACCTTGGCCGCGCAGCTCGCGATGGCGATCCGGGGATTAAAGCAAAAGGCGCAG GTCAGTTCGCTGCATCAACAGATTTTATTTCAAGGAACCTCTGCATCCAGCGGTATCGCCATTGCCCATGCCTTGGTGCT CGGTGGCGAAATCTCCCTCGAGCAGCCCGATGTTCGCTGTGAGGATATTGTCCTCGAATCCAGCCGATTAGTGGCGGCGA TGGGGCGTTGTAAAGAGGCTATTGGTGCCTTATCTCAACGTTTCGACCGTGAGCAGGATGAGGAAGTCGCCTCAATATTC AATGCGTTGCAGCTGCTGCTCGATGATGTCAGCCTAGGTGGTGAATATGCTCGCGAAGTGCAGCAGGGCTGGGAAGCAGA ATCGGCGGTTAGCCGTGTTTCGCTGCGTTATATTCAACAGTTTTTAGCGATGGAAGATCCTTACCTCAAGGAGCGGGCGA GCGATATTCGGGATCTGGGGCAAAAGGTATTAAGGCAGTTAATCGAACCCGAGCGTTTAGAGCTTGAACCCGATAAGCCG GTGATTCTAGTGACCCGTGAAGCGGATGCCACTATGCTCGCCGAATTCCCTCGGCAAAAATTGGCCGGTATTGTCACTGA ACTGGGAGGTGTTAACTCCCACGCGGCGATTTTAGCGCGCGCACTGGGCGTACCTGCGATTACTGGCGTCGAGCAGTTAT TGTCGGCCGATATTGATCAGAAGCTGTTAGTGGTCAATGCCAGCCGCGGGCAATTAATGGTGTCGCCATCGCCAGCGATT GTTAGCGAATACCGCAGTTTGATTTCGGCGCAAAAGGCGTTGCAACGTCAATACGCGCAGGAGTTAGCCCTGCCGTCGGT CATGCTCGATGGCACTCGCATTCGGTTATACCTTAACGCTGGGTTACTCAGTGGTGTCGCTTCTGAAATTGCCGAAGGTG CCGATGGTATCGGGCTGTATCGCACCGAAATTCCCTTTATGTTGCAGCAGCGTTTTCCGAGTGAGTCCGAGCAGGTAAAA GTCTATCAGCAGGTGTTATCGGCGGCATCGGGTCGCCCTGTGGTGATGCGTACCTTAGATGTGGGAGGCGATAAGCCGCT GCCTTATTTCCCTATTAAAGAAGATAACCCCTTCCTAGGTTGGCGCGGTATCCGCTTATCATTGGATCACCCAGAGCTAT TCCTCGTTCAGTTAAGAGCGATGTTGCAAGCGGGCGGAGAGTGCAAACAGCTCAGTATTTTACTGCCTATGGTCAGTAAT TTAGATGAGATTGATCAATCCTTGGCCTATCTAGAGCAGGCCTATGTTGAACTCAAAAACGATGTGAACAGCCAGATTGA AATGCCGCGCATTGGCATTATGCTCGAAGTTCCAGCGCTGTTATATCAGTTAGATGAAGTGGCAAAACGCGTCGATTTTG TGTCGGTCGGCAGTAACGATTTGACCCAATATTTACTCGCGGTGGACCGTAACAACCCAAGGGTGAGTTCCTTATTTGAT AGTTATCATCCAGGCATTCTTCGGGCACTGCATCAGGCAAGACTCGATTGTGACTATCATGAACTCGATATCAGTATCTG TGGCGAGCTGGCGGGGGAACCCATGGGGGCGATTCTGTTGGTGGCGATGGGATACCAGCATTTGAGTATGAACCAAGGCA GTTTAGCGCGGATAAATTACCTGCTGCGCCGAGTGTCCCGCGCCGATTTGACGCAACTCTTGTCGCAGGCCTTAAGTCTG TCGAACGGTTTCCAAGTGCGTGAGTTGGTTAAAGAATATTTAACACAGCAGGGATTAGCCACAATTCTTAATTAA
Upstream 100 bases:
>100_bases AGTTTGCGGTAACGGCATTGTCATTCCAAACCCAGGAAATTCCGAGGAAGCGGGTAAGACAAAGAACAACGGGCTGATTT TCAAAAGAGGATTGAAAACA
Downstream 100 bases:
>100_bases CTAATCGCGCCTTTTGCTTTAAGCTAAGGCTTCACTTAATCACGCTGTAGGTACCCGTGTGGATAGTTTGCTGTCGGTGT TCTTTATTTGCTTGGCTTTA
Product: phosphoenolpyruvate-protein phosphotransferase PtsP
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 744; Mature: 744
Protein sequence:
>744_residues MLNTLRDITQAVASAHSLETALEVLVSSTKAAMETQCCSVYILDQQELVLSATDGLEKSAVGRVRMPLTQGLVGLAAERE EAVNLADARLHPRFKLFPEVAEEEYRAFLAVPIIYQKAVVGVIVVQQASARQFSEGEEAFLMTLAAQLAMAIRGLKQKAQ VSSLHQQILFQGTSASSGIAIAHALVLGGEISLEQPDVRCEDIVLESSRLVAAMGRCKEAIGALSQRFDREQDEEVASIF NALQLLLDDVSLGGEYAREVQQGWEAESAVSRVSLRYIQQFLAMEDPYLKERASDIRDLGQKVLRQLIEPERLELEPDKP VILVTREADATMLAEFPRQKLAGIVTELGGVNSHAAILARALGVPAITGVEQLLSADIDQKLLVVNASRGQLMVSPSPAI VSEYRSLISAQKALQRQYAQELALPSVMLDGTRIRLYLNAGLLSGVASEIAEGADGIGLYRTEIPFMLQQRFPSESEQVK VYQQVLSAASGRPVVMRTLDVGGDKPLPYFPIKEDNPFLGWRGIRLSLDHPELFLVQLRAMLQAGGECKQLSILLPMVSN LDEIDQSLAYLEQAYVELKNDVNSQIEMPRIGIMLEVPALLYQLDEVAKRVDFVSVGSNDLTQYLLAVDRNNPRVSSLFD SYHPGILRALHQARLDCDYHELDISICGELAGEPMGAILLVAMGYQHLSMNQGSLARINYLLRRVSRADLTQLLSQALSL SNGFQVRELVKEYLTQQGLATILN
Sequences:
>Translated_744_residues MLNTLRDITQAVASAHSLETALEVLVSSTKAAMETQCCSVYILDQQELVLSATDGLEKSAVGRVRMPLTQGLVGLAAERE EAVNLADARLHPRFKLFPEVAEEEYRAFLAVPIIYQKAVVGVIVVQQASARQFSEGEEAFLMTLAAQLAMAIRGLKQKAQ VSSLHQQILFQGTSASSGIAIAHALVLGGEISLEQPDVRCEDIVLESSRLVAAMGRCKEAIGALSQRFDREQDEEVASIF NALQLLLDDVSLGGEYAREVQQGWEAESAVSRVSLRYIQQFLAMEDPYLKERASDIRDLGQKVLRQLIEPERLELEPDKP VILVTREADATMLAEFPRQKLAGIVTELGGVNSHAAILARALGVPAITGVEQLLSADIDQKLLVVNASRGQLMVSPSPAI VSEYRSLISAQKALQRQYAQELALPSVMLDGTRIRLYLNAGLLSGVASEIAEGADGIGLYRTEIPFMLQQRFPSESEQVK VYQQVLSAASGRPVVMRTLDVGGDKPLPYFPIKEDNPFLGWRGIRLSLDHPELFLVQLRAMLQAGGECKQLSILLPMVSN LDEIDQSLAYLEQAYVELKNDVNSQIEMPRIGIMLEVPALLYQLDEVAKRVDFVSVGSNDLTQYLLAVDRNNPRVSSLFD SYHPGILRALHQARLDCDYHELDISICGELAGEPMGAILLVAMGYQHLSMNQGSLARINYLLRRVSRADLTQLLSQALSL SNGFQVRELVKEYLTQQGLATILN >Mature_744_residues MLNTLRDITQAVASAHSLETALEVLVSSTKAAMETQCCSVYILDQQELVLSATDGLEKSAVGRVRMPLTQGLVGLAAERE EAVNLADARLHPRFKLFPEVAEEEYRAFLAVPIIYQKAVVGVIVVQQASARQFSEGEEAFLMTLAAQLAMAIRGLKQKAQ VSSLHQQILFQGTSASSGIAIAHALVLGGEISLEQPDVRCEDIVLESSRLVAAMGRCKEAIGALSQRFDREQDEEVASIF NALQLLLDDVSLGGEYAREVQQGWEAESAVSRVSLRYIQQFLAMEDPYLKERASDIRDLGQKVLRQLIEPERLELEPDKP VILVTREADATMLAEFPRQKLAGIVTELGGVNSHAAILARALGVPAITGVEQLLSADIDQKLLVVNASRGQLMVSPSPAI VSEYRSLISAQKALQRQYAQELALPSVMLDGTRIRLYLNAGLLSGVASEIAEGADGIGLYRTEIPFMLQQRFPSESEQVK VYQQVLSAASGRPVVMRTLDVGGDKPLPYFPIKEDNPFLGWRGIRLSLDHPELFLVQLRAMLQAGGECKQLSILLPMVSN LDEIDQSLAYLEQAYVELKNDVNSQIEMPRIGIMLEVPALLYQLDEVAKRVDFVSVGSNDLTQYLLAVDRNNPRVSSLFD SYHPGILRALHQARLDCDYHELDISICGELAGEPMGAILLVAMGYQHLSMNQGSLARINYLLRRVSRADLTQLLSQALSL SNGFQVRELVKEYLTQQGLATILN
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=746, Percent_Identity=44.2359249329759, Blast_Score=605, Evalue=1e-174, Organism=Escherichia coli, GI1788756, Length=597, Percent_Identity=32.6633165829146, Blast_Score=299, Evalue=5e-82, Organism=Escherichia coli, GI48994992, Length=512, Percent_Identity=32.8125, Blast_Score=273, Evalue=3e-74, Organism=Escherichia coli, GI1788726, Length=597, Percent_Identity=33.500837520938, Blast_Score=272, Evalue=5e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 81815; Mature: 81815
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTLRDITQAVASAHSLETALEVLVSSTKAAMETQCCSVYILDQQELVLSATDGLEKSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHEEECCCCCCHHH VGRVRMPLTQGLVGLAAEREEAVNLADARLHPRFKLFPEVAEEEYRAFLAVPIIYQKAVV CCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHH GVIVVQQASARQFSEGEEAFLMTLAAQLAMAIRGLKQKAQVSSLHQQILFQGTSASSGIA HHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH IAHALVLGGEISLEQPDVRCEDIVLESSRLVAAMGRCKEAIGALSQRFDREQDEEVASIF HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH NALQLLLDDVSLGGEYAREVQQGWEAESAVSRVSLRYIQQFLAMEDPYLKERASDIRDLG HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QKVLRQLIEPERLELEPDKPVILVTREADATMLAEFPRQKLAGIVTELGGVNSHAAILAR HHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ALGVPAITGVEQLLSADIDQKLLVVNASRGQLMVSPSPAIVSEYRSLISAQKALQRQYAQ HHCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH ELALPSVMLDGTRIRLYLNAGLLSGVASEIAEGADGIGLYRTEIPFMLQQRFPSESEQVK HHCCCCEEECCCEEEEEEECHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCHHHHH VYQQVLSAASGRPVVMRTLDVGGDKPLPYFPIKEDNPFLGWRGIRLSLDHPELFLVQLRA HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH MLQAGGECKQLSILLPMVSNLDEIDQSLAYLEQAYVELKNDVNSQIEMPRIGIMLEVPAL HHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHH LYQLDEVAKRVDFVSVGSNDLTQYLLAVDRNNPRVSSLFDSYHPGILRALHQARLDCDYH HHHHHHHHHHHCEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHH ELDISICGELAGEPMGAILLVAMGYQHLSMNQGSLARINYLLRRVSRADLTQLLSQALSL HHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SNGFQVRELVKEYLTQQGLATILN CCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNTLRDITQAVASAHSLETALEVLVSSTKAAMETQCCSVYILDQQELVLSATDGLEKSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHEEECCCCCCHHH VGRVRMPLTQGLVGLAAEREEAVNLADARLHPRFKLFPEVAEEEYRAFLAVPIIYQKAVV CCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHH GVIVVQQASARQFSEGEEAFLMTLAAQLAMAIRGLKQKAQVSSLHQQILFQGTSASSGIA HHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH IAHALVLGGEISLEQPDVRCEDIVLESSRLVAAMGRCKEAIGALSQRFDREQDEEVASIF HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH NALQLLLDDVSLGGEYAREVQQGWEAESAVSRVSLRYIQQFLAMEDPYLKERASDIRDLG HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QKVLRQLIEPERLELEPDKPVILVTREADATMLAEFPRQKLAGIVTELGGVNSHAAILAR HHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ALGVPAITGVEQLLSADIDQKLLVVNASRGQLMVSPSPAIVSEYRSLISAQKALQRQYAQ HHCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH ELALPSVMLDGTRIRLYLNAGLLSGVASEIAEGADGIGLYRTEIPFMLQQRFPSESEQVK HHCCCCEEECCCEEEEEEECHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCHHHHH VYQQVLSAASGRPVVMRTLDVGGDKPLPYFPIKEDNPFLGWRGIRLSLDHPELFLVQLRA HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH MLQAGGECKQLSILLPMVSNLDEIDQSLAYLEQAYVELKNDVNSQIEMPRIGIMLEVPAL HHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHH LYQLDEVAKRVDFVSVGSNDLTQYLLAVDRNNPRVSSLFDSYHPGILRALHQARLDCDYH HHHHHHHHHHHCEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHH ELDISICGELAGEPMGAILLVAMGYQHLSMNQGSLARINYLLRRVSRADLTQLLSQALSL HHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SNGFQVRELVKEYLTQQGLATILN CCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]