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The map label for this gene is 117921480

Identifier: 117921480

GI number: 117921480

Start: 3644796

End: 3645596

Strand: Reverse

Name: 117921480

Synonym: Shewana3_3041

Alternate gene names: NA

Gene position: 3645596-3644796 (Counterclockwise)

Preceding gene: 117921481

Following gene: 117921479

Centisome position: 73.32

GC content: 47.32

Gene sequence:

>801_bases
GTGGATAGTTTGCTGTCGGTGTTCTTTATTTGCTTGGCTTTAGGCGCGTTTGTCGGTTTTATGGCGGGGTTATTGGGCAT
CGGTGGTGGCTTAATTGTCGTGCCCGCACTGCTTTATATCTTGCCCTCGGTTGGCATCACTTCGGCTCAGTTACCCCATA
TTGCGATTGCCACATCCCTTGCGGCGATTATTTTAACCTCGATTTCTTCAGCCAGAGCTCACCATAAACGCGGTAATGTA
CCCTGGGGATTGTTTCGAACCATGTTTCCGGGGATTATTCTCGGCGCTTTAATGTCTGGCTTTATTGCCGAGCAAATCCC
TGCTGCGACCCTCAGACAAGGGTTTGCAATATTTGTGATGCTGATGGCGATTCAAATGGCTTATCCCTTTAAAACTGAAT
CGAATCGAGAACTGCCAAACTCGATGGTTTTGTTTGTGGTGGCCGTGATTGTTGCCGCGATTGCAGGATTGATGGGGATC
GGCGGCGGCGTTTTGTTAGTGCCGTTTTTAACCTATTTTGGTTTACAGATGCGCCTAGCTGTAGGATTTTCAGCCGCGAC
CGGATTATTAATCTCCTTGTCGGGCAGCTTAGGGTATATAATCGCGGGCTTTAACGCGCCGGATCTCCCAGAGGGAACCT
TAGGGTATATCTATTTACCTGCGTTGTTTGGCTTAATAATAACCTCAATTTTAATGGCTCCTGTAGGCGTTAAGGCGGCA
AGCACTTGGCCTACCTCGGTCCTTAAAAAAATATTTGCACTTTTACTCTTGTGTGTCGGTCTCAAATTAATTCTGAGCTG
A

Upstream 100 bases:

>100_bases
GAATATTTAACACAGCAGGGATTAGCCACAATTCTTAATTAACTAATCGCGCCTTTTGCTTTAAGCTAAGGCTTCACTTA
ATCACGCTGTAGGTACCCGT

Downstream 100 bases:

>100_bases
TTTTTAGTGTTTAGCCCTCGATTTGAGGCTGTTGATGGATAAGTTATGGCATTGAATTTTCCCAATATCGATCCCGTGAT
CGTGAAGTTTGGTCCCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSLAAIILTSISSARAHHKRGNV
PWGLFRTMFPGIILGALMSGFIAEQIPAATLRQGFAIFVMLMAIQMAYPFKTESNRELPNSMVLFVVAVIVAAIAGLMGI
GGGVLLVPFLTYFGLQMRLAVGFSAATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVKAA
STWPTSVLKKIFALLLLCVGLKLILS

Sequences:

>Translated_266_residues
MDSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSLAAIILTSISSARAHHKRGNV
PWGLFRTMFPGIILGALMSGFIAEQIPAATLRQGFAIFVMLMAIQMAYPFKTESNRELPNSMVLFVVAVIVAAIAGLMGI
GGGVLLVPFLTYFGLQMRLAVGFSAATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVKAA
STWPTSVLKKIFALLLLCVGLKLILS
>Mature_266_residues
MDSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSLAAIILTSISSARAHHKRGNV
PWGLFRTMFPGIILGALMSGFIAEQIPAATLRQGFAIFVMLMAIQMAYPFKTESNRELPNSMVLFVVAVIVAAIAGLMGI
GGGVLLVPFLTYFGLQMRLAVGFSAATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVKAA
STWPTSVLKKIFALLLLCVGLKLILS

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27727; Mature: 27727

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
AAIILTSISSARAHHKRGNVPWGLFRTMFPGIILGALMSGFIAEQIPAATLRQGFAIFVM
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LMAIQMAYPFKTESNRELPNSMVLFVVAVIVAAIAGLMGIGGGVLLVPFLTYFGLQMRLA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VGFSAATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVKAA
HHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
STWPTSVLKKIFALLLLCVGLKLILS
CCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
AAIILTSISSARAHHKRGNVPWGLFRTMFPGIILGALMSGFIAEQIPAATLRQGFAIFVM
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LMAIQMAYPFKTESNRELPNSMVLFVVAVIVAAIAGLMGIGGGVLLVPFLTYFGLQMRLA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VGFSAATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVKAA
HHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
STWPTSVLKKIFALLLLCVGLKLILS
CCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]