| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is lgt [H]
Identifier: 117921479
GI number: 117921479
Start: 3643944
End: 3644750
Strand: Reverse
Name: lgt [H]
Synonym: Shewana3_3040
Alternate gene names: 117921479
Gene position: 3644750-3643944 (Counterclockwise)
Preceding gene: 117921480
Following gene: 117921478
Centisome position: 73.3
GC content: 49.19
Gene sequence:
>807_bases ATGGCATTGAATTTTCCCAATATCGATCCCGTGATCGTGAAGTTTGGTCCCTTTGATATTTTTGGACAAACCTTTGAACC TGCCCTGCGTTGGTATGGATTTACTTACCTAGTTGGCTTTGTCGCCGCCATGTGGTTACTCAATCGTCAGGCCGACCGCT CCAATGGTTTATGGTCGAGGGAACAGGTTTCCGATCTGCTGTTTTATGGCTTTTTAGGGGTGATTTTAGGTGGCCGTATC GGCTATGTGCTCTTCTATCATTTCGATTACTTCCTCGCTAGCCCAATGTATTTGTTTAAGATTTCAGAAGGTGGCATGTC TTTCCACGGCGGCTTGATGGGGGTGATTACCGCCATGATTTATATCGCCTGGAAGCAAAAGCGTACCTTCTTTGCGGTCG CAGACATGGTGGCGCCCGTGGTGCCCATTGGCTTAGGTGCGGGGCGTATTGGTAACTTTATCAATGGTGAGTTGTGGGGC CGTGTCACCGATGTCCCTTGGGCCATGGTGTTCCCAAGTGGTGGACCTGAACCTCGTCACCCATCACAACTCTATCAATT CGCCCTTGAAGGGGTGGCCTTATTCCTGCTCCTCTATTGGTTCAGTAAACGAACGAAGAAAGTCGGCGCCGTGTCGGGCA TGTTCTTACTCGGATACGGAATTTTCCGTGTGATTGTTGAAACCGTAAGACAACCTGATGCGCAGTTAGGTCTCTACTGG GGCTTTATGACGATGGGGCAGATCCTCTCTGTGCCGATGATCCTCTTCGGTTTATATTTAATTCTTCGTCCAGAGGGTAA GCAGTAA
Upstream 100 bases:
>100_bases AAAAATATTTGCACTTTTACTCTTGTGTGTCGGTCTCAAATTAATTCTGAGCTGATTTTTAGTGTTTAGCCCTCGATTTG AGGCTGTTGATGGATAAGTT
Downstream 100 bases:
>100_bases TGCAACAGTATTTAGACTTGATGAAGCACATCTTAGCCGAAGGTGTGGATAAATCAGACCGCACAGGTACCGGCACTCGC TCAGTGTTTGGTTATCAAAT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MALNFPNIDPVIVKFGPFDIFGQTFEPALRWYGFTYLVGFVAAMWLLNRQADRSNGLWSREQVSDLLFYGFLGVILGGRI GYVLFYHFDYFLASPMYLFKISEGGMSFHGGLMGVITAMIYIAWKQKRTFFAVADMVAPVVPIGLGAGRIGNFINGELWG RVTDVPWAMVFPSGGPEPRHPSQLYQFALEGVALFLLLYWFSKRTKKVGAVSGMFLLGYGIFRVIVETVRQPDAQLGLYW GFMTMGQILSVPMILFGLYLILRPEGKQ
Sequences:
>Translated_268_residues MALNFPNIDPVIVKFGPFDIFGQTFEPALRWYGFTYLVGFVAAMWLLNRQADRSNGLWSREQVSDLLFYGFLGVILGGRI GYVLFYHFDYFLASPMYLFKISEGGMSFHGGLMGVITAMIYIAWKQKRTFFAVADMVAPVVPIGLGAGRIGNFINGELWG RVTDVPWAMVFPSGGPEPRHPSQLYQFALEGVALFLLLYWFSKRTKKVGAVSGMFLLGYGIFRVIVETVRQPDAQLGLYW GFMTMGQILSVPMILFGLYLILRPEGKQ >Mature_267_residues ALNFPNIDPVIVKFGPFDIFGQTFEPALRWYGFTYLVGFVAAMWLLNRQADRSNGLWSREQVSDLLFYGFLGVILGGRIG YVLFYHFDYFLASPMYLFKISEGGMSFHGGLMGVITAMIYIAWKQKRTFFAVADMVAPVVPIGLGAGRIGNFINGELWGR VTDVPWAMVFPSGGPEPRHPSQLYQFALEGVALFLLLYWFSKRTKKVGAVSGMFLLGYGIFRVIVETVRQPDAQLGLYWG FMTMGQILSVPMILFGLYLILRPEGKQ
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=283, Percent_Identity=52.2968197879859, Blast_Score=281, Evalue=4e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 30197; Mature: 30066
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNFPNIDPVIVKFGPFDIFGQTFEPALRWYGFTYLVGFVAAMWLLNRQADRSNGLWSR CCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH EQVSDLLFYGFLGVILGGRIGYVLFYHFDYFLASPMYLFKISEGGMSFHGGLMGVITAMI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHH YIAWKQKRTFFAVADMVAPVVPIGLGAGRIGNFINGELWGRVTDVPWAMVFPSGGPEPRH HHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCCEECCCCEEEEECCCCCCCCC PSQLYQFALEGVALFLLLYWFSKRTKKVGAVSGMFLLGYGIFRVIVETVRQPDAQLGLYW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GFMTMGQILSVPMILFGLYLILRPEGKQ HHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALNFPNIDPVIVKFGPFDIFGQTFEPALRWYGFTYLVGFVAAMWLLNRQADRSNGLWSR CCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH EQVSDLLFYGFLGVILGGRIGYVLFYHFDYFLASPMYLFKISEGGMSFHGGLMGVITAMI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHH YIAWKQKRTFFAVADMVAPVVPIGLGAGRIGNFINGELWGRVTDVPWAMVFPSGGPEPRH HHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHCCEECCCCEEEEECCCCCCCCC PSQLYQFALEGVALFLLLYWFSKRTKKVGAVSGMFLLGYGIFRVIVETVRQPDAQLGLYW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GFMTMGQILSVPMILFGLYLILRPEGKQ HHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]