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The map label for this gene is yjcE [H]

Identifier: 117921447

GI number: 117921447

Start: 3614307

End: 3615476

Strand: Reverse

Name: yjcE [H]

Synonym: Shewana3_3008

Alternate gene names: 117921447

Gene position: 3615476-3614307 (Counterclockwise)

Preceding gene: 117921448

Following gene: 117921444

Centisome position: 72.71

GC content: 49.4

Gene sequence:

>1170_bases
ATGACTAGTTATCAAATTCTCTGTATTCTCTGTGCGTTAGCTTTAGTCACGTCTGTGGCATCCTCGCGTTTGCATAAGCT
GCAAGAAACCGTCGCCATTACTGCATTAGCCTTAGGAATGAGTCTGTTGCTATTACTGGGCGGTAAAGCGCTTGGCGGCC
ATGTTTATGGTTACTTTGTGGCGGGGCTGGAGAAACTCGACTTTCAGGCGCTATTGCTCAATGGCATGTTAGGTTTTCTC
TTATTTGCCGGGGCATTGCAGATCCGCTTAAAAATCTTAAGGCATCAGAAATGGGAAATTCTCATTCTTGCCTTTGTCAG
TACCTTACTCTCGACTTTTATCGTCGGTGGTTTGCTTTATTACATCGCGCCCATGCTGGGATTACCCTTGGCCTTAAGCC
ATTGTTTGCTCTTTGGTGCCTTGATTTCCCCCACAGATCCGATTGCCGTGTTAGCCATTCTGAAGAAGATGGGCGCGCCC
GAAGATATTGCGATTCAGGTAGAAGGGGAATCGCTCTTTAACGATGGTATAGGGCTGGTGATTTTTGTGGCCATCTCCCA
TCTGGCTTTTTCAACTGAGCCGCTAACCTTTTCGCAAATTTCGCTATTGTTTGTTCAAGAGGCGCTCGGGGGCGTCGTTT
ATGGCGCCGTGCTAGGCGTATTGCTGCACCATTTCTTTCGCTACTGTGAGGAAGAAACCCAGTTGATGCTAGTCACTTTG
CTGATCCCGACGGCGGGTTATGTCATAGCCGAAGTGTTAGGGGTATCGGGGCCTCTGGCGATGGTCAGTGCTGGGATGAT
TATCGGTAACTACAGCGTGCCTAAGTATTTTGTGCGCCATGAGCGGGTGAAACTCTACACTTTTTGGTCGCTGATTGAAT
CCTTCTTTAATGCGCTGCTGTTCCTCCTGCTGGGATTATTACTCTTGCTCGTCACCTTTAAGGCGCCATTATGGTGGTTT
ATGTTAGTGGCTATTCCTCTGGTGTTAACGGCGCGGGCGGTGAGTGTATTTTTGCCCTATATCGGATTTAGGATGGTGAA
GTCTTACAATCCCTATGCCGAGTCGATACTCATTTGGGGTGGGCTCAGGGGGGGGGCTGGCCTTGGCCATGGCGATGAGT
TTACCCGAGGGCGTGATTGTCGATTCACAAAGCGGTGTCGAGCTGCGTGA

Upstream 100 bases:

>100_bases
TTGCCATCGGATAATTAAAGGCTGGTTAAGTCTGTTGGATGGTTTAGAAGTCTAAAACTTGTGCTAGAGTTTCTTCATCT
TAGGGTGATTAGAGACTCTT

Downstream 100 bases:

>100_bases
GCTACTGCTCGTGATGACCTATGCTGTGGTGGTGTTTTCAATCTTAGTGCAGGGCTCGAGTATGACGGGGTTAATTCGTC
GCAGTAATGCGGTGGCAACA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MTSYQILCILCALALVTSVASSRLHKLQETVAITALALGMSLLLLLGGKALGGHVYGYFVAGLEKLDFQALLLNGMLGFL
LFAGALQIRLKILRHQKWEILILAFVSTLLSTFIVGGLLYYIAPMLGLPLALSHCLLFGALISPTDPIAVLAILKKMGAP
EDIAIQVEGESLFNDGIGLVIFVAISHLAFSTEPLTFSQISLLFVQEALGGVVYGAVLGVLLHHFFRYCEEETQLMLVTL
LIPTAGYVIAEVLGVSGPLAMVSAGMIIGNYSVPKYFVRHERVKLYTFWSLIESFFNALLFLLLGLLLLLVTFKAPLWWF
MLVAIPLVLTARAVSVFLPYIGFRMVKSYNPYAESILIWGGLRGGAGLGHGDEFTRGRDCRFTKRCRAA

Sequences:

>Translated_389_residues
MTSYQILCILCALALVTSVASSRLHKLQETVAITALALGMSLLLLLGGKALGGHVYGYFVAGLEKLDFQALLLNGMLGFL
LFAGALQIRLKILRHQKWEILILAFVSTLLSTFIVGGLLYYIAPMLGLPLALSHCLLFGALISPTDPIAVLAILKKMGAP
EDIAIQVEGESLFNDGIGLVIFVAISHLAFSTEPLTFSQISLLFVQEALGGVVYGAVLGVLLHHFFRYCEEETQLMLVTL
LIPTAGYVIAEVLGVSGPLAMVSAGMIIGNYSVPKYFVRHERVKLYTFWSLIESFFNALLFLLLGLLLLLVTFKAPLWWF
MLVAIPLVLTARAVSVFLPYIGFRMVKSYNPYAESILIWGGLRGGAGLGHGDEFTRGRDCRFTKRCRAA
>Mature_388_residues
TSYQILCILCALALVTSVASSRLHKLQETVAITALALGMSLLLLLGGKALGGHVYGYFVAGLEKLDFQALLLNGMLGFLL
FAGALQIRLKILRHQKWEILILAFVSTLLSTFIVGGLLYYIAPMLGLPLALSHCLLFGALISPTDPIAVLAILKKMGAPE
DIAIQVEGESLFNDGIGLVIFVAISHLAFSTEPLTFSQISLLFVQEALGGVVYGAVLGVLLHHFFRYCEEETQLMLVTLL
IPTAGYVIAEVLGVSGPLAMVSAGMIIGNYSVPKYFVRHERVKLYTFWSLIESFFNALLFLLLGLLLLLVTFKAPLWWFM
LVAIPLVLTARAVSVFLPYIGFRMVKSYNPYAESILIWGGLRGGAGLGHGDEFTRGRDCRFTKRCRAA

Specific function: Unknown

COG id: COG0025

COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]

Homologues:

Organism=Homo sapiens, GI27734935, Length=325, Percent_Identity=23.3846153846154, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI148727259, Length=285, Percent_Identity=25.9649122807018, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI14211919, Length=326, Percent_Identity=26.0736196319018, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI110227626, Length=326, Percent_Identity=23.9263803680982, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI294997330, Length=327, Percent_Identity=23.8532110091743, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1790501, Length=200, Percent_Identity=35.5, Blast_Score=96, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71992107, Length=345, Percent_Identity=20.5797101449275, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71992101, Length=345, Percent_Identity=20.5797101449275, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71999819, Length=279, Percent_Identity=25.8064516129032, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71999817, Length=279, Percent_Identity=25.8064516129032, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71999821, Length=279, Percent_Identity=25.8064516129032, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71987535, Length=282, Percent_Identity=27.3049645390071, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71990932, Length=295, Percent_Identity=27.7966101694915, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71987537, Length=282, Percent_Identity=27.3049645390071, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71990924, Length=295, Percent_Identity=27.7966101694915, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25150332, Length=285, Percent_Identity=25.2631578947368, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71980847, Length=262, Percent_Identity=27.8625954198473, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6320663, Length=306, Percent_Identity=26.797385620915, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221510740, Length=289, Percent_Identity=25.9515570934256, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI221510736, Length=289, Percent_Identity=25.9515570934256, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI221510732, Length=289, Percent_Identity=25.9515570934256, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24585580, Length=289, Percent_Identity=25.9515570934256, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24585578, Length=289, Percent_Identity=25.9515570934256, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI281360447, Length=285, Percent_Identity=27.3684210526316, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR018422
- InterPro:   IPR004705 [H]

Pfam domain/function: PF00999 Na_H_Exchanger [H]

EC number: NA

Molecular weight: Translated: 42480; Mature: 42348

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSYQILCILCALALVTSVASSRLHKLQETVAITALALGMSLLLLLGGKALGGHVYGYFV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHH
AGLEKLDFQALLLNGMLGFLLFAGALQIRLKILRHQKWEILILAFVSTLLSTFIVGGLLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
YIAPMLGLPLALSHCLLFGALISPTDPIAVLAILKKMGAPEDIAIQVEGESLFNDGIGLV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHCCHHHH
IFVAISHLAFSTEPLTFSQISLLFVQEALGGVVYGAVLGVLLHHFFRYCEEETQLMLVTL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPTAGYVIAEVLGVSGPLAMVSAGMIIGNYSVPKYFVRHERVKLYTFWSLIESFFNALL
HHHHHHHHHHHHHCCCCCHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLLGLLLLLVTFKAPLWWFMLVAIPLVLTARAVSVFLPYIGFRMVKSYNPYAESILIWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEE
GLRGGAGLGHGDEFTRGRDCRFTKRCRAA
CCCCCCCCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
TSYQILCILCALALVTSVASSRLHKLQETVAITALALGMSLLLLLGGKALGGHVYGYFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHH
AGLEKLDFQALLLNGMLGFLLFAGALQIRLKILRHQKWEILILAFVSTLLSTFIVGGLLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
YIAPMLGLPLALSHCLLFGALISPTDPIAVLAILKKMGAPEDIAIQVEGESLFNDGIGLV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHCCHHHH
IFVAISHLAFSTEPLTFSQISLLFVQEALGGVVYGAVLGVLLHHFFRYCEEETQLMLVTL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPTAGYVIAEVLGVSGPLAMVSAGMIIGNYSVPKYFVRHERVKLYTFWSLIESFFNALL
HHHHHHHHHHHHHCCCCCHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLLGLLLLLVTFKAPLWWFMLVAIPLVLTARAVSVFLPYIGFRMVKSYNPYAESILIWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEE
GLRGGAGLGHGDEFTRGRDCRFTKRCRAA
CCCCCCCCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]