Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117921448

Identifier: 117921448

GI number: 117921448

Start: 3615522

End: 3615857

Strand: Reverse

Name: 117921448

Synonym: Shewana3_3009

Alternate gene names: NA

Gene position: 3615857-3615522 (Counterclockwise)

Preceding gene: 117921449

Following gene: 117921447

Centisome position: 72.72

GC content: 42.86

Gene sequence:

>336_bases
ATGACAACGACAACCACATATGCCGCAAAAATTGAAGATCGCAGCTTAGGCCATTTGCTTTACGCCTTAATGTCAGGCTT
TCCGCTGTTACTGCTGCCGGTATTGTTGAGCCTATTTATCAACTTGTCTCAACGACATACGCAAGGTAATGCCTTGCTAG
CATCACATCTACGCTGGCAACGTCACTCCAATGTGATATTTCTTGGTCTGTTAGTATTGGGCTATTGTCTGCCCATCACT
TGGCTCAGTCTTTCGATTTATCTCTTTGGTATCATTTGGTTTTGCCATCGGATAATTAAAGGCTGGTTAAGTCTGTTGGA
TGGTTTAGAAGTCTAA

Upstream 100 bases:

>100_bases
AATATTTTTGCGCCTTAGTTGCGATTATGTCTGCGAGAACGTAAGGTTAAAGACGAGGGCGGAGTAACGCCCTGTCCCAT
CGTCTGGCTGGAGTCTCTCA

Downstream 100 bases:

>100_bases
AACTTGTGCTAGAGTTTCTTCATCTTAGGGTGATTAGAGACTCTTATGACTAGTTATCAAATTCTCTGTATTCTCTGTGC
GTTAGCTTTAGTCACGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTTTTTYAAKIEDRSLGHLLYALMSGFPLLLLPVLLSLFINLSQRHTQGNALLASHLRWQRHSNVIFLGLLVLGYCLPIT
WLSLSIYLFGIIWFCHRIIKGWLSLLDGLEV

Sequences:

>Translated_111_residues
MTTTTTYAAKIEDRSLGHLLYALMSGFPLLLLPVLLSLFINLSQRHTQGNALLASHLRWQRHSNVIFLGLLVLGYCLPIT
WLSLSIYLFGIIWFCHRIIKGWLSLLDGLEV
>Mature_110_residues
TTTTTYAAKIEDRSLGHLLYALMSGFPLLLLPVLLSLFINLSQRHTQGNALLASHLRWQRHSNVIFLGLLVLGYCLPITW
LSLSIYLFGIIWFCHRIIKGWLSLLDGLEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12623; Mature: 12492

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTTYAAKIEDRSLGHLLYALMSGFPLLLLPVLLSLFINLSQRHTQGNALLASHLRWQ
CCCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RHSNVIFLGLLVLGYCLPITWLSLSIYLFGIIWFCHRIIKGWLSLLDGLEV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTTTTYAAKIEDRSLGHLLYALMSGFPLLLLPVLLSLFINLSQRHTQGNALLASHLRWQ
CCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RHSNVIFLGLLVLGYCLPITWLSLSIYLFGIIWFCHRIIKGWLSLLDGLEV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA