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The map label for this gene is ywdK [H]

Identifier: 117921333

GI number: 117921333

Start: 3462543

End: 3462935

Strand: Reverse

Name: ywdK [H]

Synonym: Shewana3_2892

Alternate gene names: 117921333

Gene position: 3462935-3462543 (Counterclockwise)

Preceding gene: 117921334

Following gene: 117921332

Centisome position: 69.65

GC content: 52.93

Gene sequence:

>393_bases
ATGCGTAAAGGATTGTTGTTACTCGCCGCGGTAAGCGGATTTTTTGCGGTTGCGCTAGGCGCTTTTGGTGCCCATGGACT
CAAGGCTGTCGCGCCGCCAGAGCTGATTGATGTGTTTAATCTAGGCGTGCAATATCACTTCTACCATACTTTTGCGCTGA
TTGCCGTCGCCTTTGCTGGGCAGTGGTTAACCTCACGCTTGCTAGATTGGGCGGCGTACCTGTTTATGGCCGGCATAGTG
CTGTTTTCTGGCTCGCTCTACGGTTTAGCACTGGTCGGTAGCAAATGGTTAGGCCCCATTACCCCAATGGGTGGTGGCTG
TTTCCTCTTAGGTTGGTTATTGCTGGCTGCGGCCGTATGGCGCCATAAAGTGGTGGATGGCAACGAGTCATAA

Upstream 100 bases:

>100_bases
ATTTATTGGCTAATGTTTTTTCTTGATATGGCGTAAAGCGCTCAGGCGTTACAGCTAGAGCGTCGTCTGTCGTAAAGCCT
ATTGGTTTTTGGAGGTAAAA

Downstream 100 bases:

>100_bases
TACTTGTGTGGCGCAGCCATTGCGCTGTGCGTTCATGCTGCCAATCACACAAAAGCCCGATAGCAAATCGGGCTTTTGTG
TATTGAAATTGCTATACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRKGLLLLAAVSGFFAVALGAFGAHGLKAVAPPELIDVFNLGVQYHFYHTFALIAVAFAGQWLTSRLLDWAAYLFMAGIV
LFSGSLYGLALVGSKWLGPITPMGGGCFLLGWLLLAAAVWRHKVVDGNES

Sequences:

>Translated_130_residues
MRKGLLLLAAVSGFFAVALGAFGAHGLKAVAPPELIDVFNLGVQYHFYHTFALIAVAFAGQWLTSRLLDWAAYLFMAGIV
LFSGSLYGLALVGSKWLGPITPMGGGCFLLGWLLLAAAVWRHKVVDGNES
>Mature_130_residues
MRKGLLLLAAVSGFFAVALGAFGAHGLKAVAPPELIDVFNLGVQYHFYHTFALIAVAFAGQWLTSRLLDWAAYLFMAGIV
LFSGSLYGLALVGSKWLGPITPMGGGCFLLGWLLLAAAVWRHKVVDGNES

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=119, Percent_Identity=41.1764705882353, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 13869; Mature: 13869

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGLLLLAAVSGFFAVALGAFGAHGLKAVAPPELIDVFNLGVQYHFYHTFALIAVAFAG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QWLTSRLLDWAAYLFMAGIVLFSGSLYGLALVGSKWLGPITPMGGGCFLLGWLLLAAAVW
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RHKVVDGNES
HHHCCCCCCC
>Mature Secondary Structure
MRKGLLLLAAVSGFFAVALGAFGAHGLKAVAPPELIDVFNLGVQYHFYHTFALIAVAFAG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QWLTSRLLDWAAYLFMAGIVLFSGSLYGLALVGSKWLGPITPMGGGCFLLGWLLLAAAVW
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RHKVVDGNES
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]