| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921334
Identifier: 117921334
GI number: 117921334
Start: 3463023
End: 3463694
Strand: Reverse
Name: 117921334
Synonym: Shewana3_2893
Alternate gene names: NA
Gene position: 3463694-3463023 (Counterclockwise)
Preceding gene: 117921335
Following gene: 117921333
Centisome position: 69.66
GC content: 51.79
Gene sequence:
>672_bases GTGAGTTGTTACCCGGATAACCCCTTGGTCAATGAGGATGTGGTGCCAAGTGCCTATGTGTTAGAAGGCGAGCCCTCAGA GACCTTGATTTTATTTGCCCACGGCGCGGGAGCGAATCGAGATTCCGACTTTATGTGCCAAATGGCCGCAGGTCTTGTCG CCAAGGGCTTTCAAGTGATGCGCTTTAATTTTCCCTACATGCAGGCCAATGCCGTGGATGGTAAAAAGCGCCCGCCTGAC AGAGCGCCAAAGCTGCTTGCCTGTTTTGGCGAGATGCTCAGTGTGGCGCACGCTCAGCCTAAGGTTAAGCGTGTGGTCTT GATGGGTAAATCCATGGGCGGACGCATGGCGGCGTTACTGGCCTGCGATAGCGCGCAAGCCAGCCGTATCGATAGGGTCA TTTGCTTAGGTTATCCCTTTATTCCGCTTAAGGGTGGTGAACCTAGGTTAGAGCCCCTTAACGACTGCCAAGTGCCCGTG TTAGTGCTACAAGGTGAGCGGGATAAGTTTGGCACACAGGCGCAGCTCCTAAGTTGGCCGCTTAACAGTGATATACAAAT TGAATACTTAGCCGATGGGGATCATAGTTTTGTCCCAAGAAAGTCGTCAGGCACGACCGAAGCGGCTAACCTTGCATTGG CTGTTGATTTATCAGCAAAATTTATTGGCTAA
Upstream 100 bases:
>100_bases GATGCCTATTACCTCGTCTGCCAACAGAATCATGCCGAGCTGGGTAAAGTGGTCGCGTTCCGTGAGTGGATGTTAGATAT GTTTGCCGAGGAGTCACGCA
Downstream 100 bases:
>100_bases TGTTTTTTCTTGATATGGCGTAAAGCGCTCAGGCGTTACAGCTAGAGCGTCGTCTGTCGTAAAGCCTATTGGTTTTTGGA GGTAAAAATGCGTAAAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSCYPDNPLVNEDVVPSAYVLEGEPSETLILFAHGAGANRDSDFMCQMAAGLVAKGFQVMRFNFPYMQANAVDGKKRPPD RAPKLLACFGEMLSVAHAQPKVKRVVLMGKSMGGRMAALLACDSAQASRIDRVICLGYPFIPLKGGEPRLEPLNDCQVPV LVLQGERDKFGTQAQLLSWPLNSDIQIEYLADGDHSFVPRKSSGTTEAANLALAVDLSAKFIG
Sequences:
>Translated_223_residues MSCYPDNPLVNEDVVPSAYVLEGEPSETLILFAHGAGANRDSDFMCQMAAGLVAKGFQVMRFNFPYMQANAVDGKKRPPD RAPKLLACFGEMLSVAHAQPKVKRVVLMGKSMGGRMAALLACDSAQASRIDRVICLGYPFIPLKGGEPRLEPLNDCQVPV LVLQGERDKFGTQAQLLSWPLNSDIQIEYLADGDHSFVPRKSSGTTEAANLALAVDLSAKFIG >Mature_222_residues SCYPDNPLVNEDVVPSAYVLEGEPSETLILFAHGAGANRDSDFMCQMAAGLVAKGFQVMRFNFPYMQANAVDGKKRPPDR APKLLACFGEMLSVAHAQPKVKRVVLMGKSMGGRMAALLACDSAQASRIDRVICLGYPFIPLKGGEPRLEPLNDCQVPVL VLQGERDKFGTQAQLLSWPLNSDIQIEYLADGDHSFVPRKSSGTTEAANLALAVDLSAKFIG
Specific function: Unknown
COG id: COG3571
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24102; Mature: 23971
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCYPDNPLVNEDVVPSAYVLEGEPSETLILFAHGAGANRDSDFMCQMAAGLVAKGFQVM CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEE RFNFPYMQANAVDGKKRPPDRAPKLLACFGEMLSVAHAQPKVKRVVLMGKSMGGRMAALL EEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEE ACDSAQASRIDRVICLGYPFIPLKGGEPRLEPLNDCQVPVLVLQGERDKFGTQAQLLSWP EECCHHHHHCCEEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECC LNSDIQIEYLADGDHSFVPRKSSGTTEAANLALAVDLSAKFIG CCCCEEEEEEECCCCCCCCCCCCCCCCHHEEEEEEEECEEECC >Mature Secondary Structure SCYPDNPLVNEDVVPSAYVLEGEPSETLILFAHGAGANRDSDFMCQMAAGLVAKGFQVM CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEE RFNFPYMQANAVDGKKRPPDRAPKLLACFGEMLSVAHAQPKVKRVVLMGKSMGGRMAALL EEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEE ACDSAQASRIDRVICLGYPFIPLKGGEPRLEPLNDCQVPVLVLQGERDKFGTQAQLLSWP EECCHHHHHCCEEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECC LNSDIQIEYLADGDHSFVPRKSSGTTEAANLALAVDLSAKFIG CCCCEEEEEEECCCCCCCCCCCCCCCCHHEEEEEEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA