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The map label for this gene is mcp4 [H]

Identifier: 117920964

GI number: 117920964

Start: 3014080

End: 3015681

Strand: Direct

Name: mcp4 [H]

Synonym: Shewana3_2521

Alternate gene names: 117920964

Gene position: 3014080-3015681 (Clockwise)

Preceding gene: 117920963

Following gene: 117920966

Centisome position: 60.62

GC content: 50.06

Gene sequence:

>1602_bases
ATGTTTAAACTCGCCGACATCCCCGTCAGCCGAAAACTCGCGCTACAACTTATCACAGCCCTTATCGGCGCCTTAATTCT
TCTCACCCTTTCTGTCACTACCTTAAAAAGCAATTTGATGGCAGAACGTGAAGCCAGACTCAACGCAGTGCTCAGCTTAG
CCCTCAGTCGTATTCAGGCTTTACAGCAAAACTTACCCCTAGAGCAGGCTCAACAAGCCGCAAAAGAGATGCTTAACAAT
ATGCGGTTCGACGGTGACAACTACCTGTTTGTGATTGATGAAACACGCCACATCATAGTTCACCCCGTTAAACCCGAGTT
AGTCAGCCAGCAAATGGGCAACAATGGCGCAGAGCAGTACTGGTTCAGCATGGTCGAATTAGGGCGCAATGGTCAGCAAG
GTGTCTTGCAATATCCTTGGGTAACAGGCAATGGCAAAAAAGCCCAGAAAATGTCCTTAGTGATGGGATTTAAACCCTGG
GGCTGGATTTTAGGATCGGGGATTTTACTGCAAGACATTGAAAACACGATTTGGCATGAATATGTGCTAATGGGCGGCAC
TACACTTATTCTCATTCTACTGATGGCGGCACTGGGCTACATCATCAGTCGCTCTATTGTTCAACCCTTAGATCAAGTGA
ATAACGCGATGCAAATCATCGCCACTGGCAACCTGACGCCGCAGCTTGCGGTCACAGGCAAAGATGAACTTGCGGCCCTA
GCGCACAATATCAATCAGAGCATGGCAAGCATTCGAACGGCATTGGCTGAGGCTAACCACAGCGCCGACAACGTCTCACA
AGCCGCTTCACGTATAGCATCAACCGCCGAAGAAACCAATCAAGCGGTAAACAACCAGCGGGATCAACTCGCCCAGTTAG
CCACGGCGATGAACGAAATGAGCGCCACCATTGCCGATGTGGCCAATAATGCCGAAAGTACCGCGAAAGACACTAAAGAA
GCCACCCGCGAAGCCGGACTTGGCGATAAGGACGTGCACGCCAGCGTTGACGGTATCCATGCGCTTGCCAAAGAAGTGGA
ACAAGCAACGCAGCAAGTGAATAAATTAAAAGAAGAAATCATGCAAATCAGTGAAGTGACGGCGGTGATCAGTGCTATTT
CGGATCAAACCAATTTATTAGCATTAAACGCCGCCATTGAAGCGGCGCGTGCCGGTGAGCAGGGCCGAGGTTTCGCCGTG
GTGGCCGATGAAGTGCGGCAATTAGCCAGCAGAACGAGGCAATCGACAGAGGAAATTCAAAACACTATTTCCCTATTACA
ACAACGTGCCGTCAGTGCTGCCAATGCGATGGATACGAGCCGCGATCTGGCTGAAAAGAGCGTTGACCAGTCCACAAAGG
CAGGCAACGATTTATCCCTCATTGTGACCCATATTAAGCACGTGAGTGATATGGCCACCCAGATTGCAACCGCGGCCGAA
GAGCAAAGCGCGGTGGCAGAAGAAATGAACCGTAACGTCTGCGGGATTAATAGTTCGGCGCTTGAAGTGTCTGAATCAGC
CACCTATCTCGCTCAAGAAAGCGAGAGCCTCGCCGAGCTATCGCTTAATCTCAATAACAAACTGGCGGCGTTTAAGCTCT
AA

Upstream 100 bases:

>100_bases
AATAACACTGACTTCCACATAAGTACGTTTCATAAGCAGCCGCTAAAAACCTAGGCAAAAAGGATAGCTTAGTGAGCGTG
ACCAAGAAAAAGGAGCTTTT

Downstream 100 bases:

>100_bases
ATCAGAGTGATATCAGAGTGATATCAATATGGGGCCAACATCCTGATGTTGGCCCCTTCTTTAACGACTCGCCTTGACTA
GGCTCGAAATCAATGCCCGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MFKLADIPVSRKLALQLITALIGALILLTLSVTTLKSNLMAEREARLNAVLSLALSRIQALQQNLPLEQAQQAAKEMLNN
MRFDGDNYLFVIDETRHIIVHPVKPELVSQQMGNNGAEQYWFSMVELGRNGQQGVLQYPWVTGNGKKAQKMSLVMGFKPW
GWILGSGILLQDIENTIWHEYVLMGGTTLILILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQLAVTGKDELAAL
AHNINQSMASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQLATAMNEMSATIADVANNAESTAKDTKE
ATREAGLGDKDVHASVDGIHALAKEVEQATQQVNKLKEEIMQISEVTAVISAISDQTNLLALNAAIEAARAGEQGRGFAV
VADEVRQLASRTRQSTEEIQNTISLLQQRAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMATQIATAAE
EQSAVAEEMNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAFKL

Sequences:

>Translated_533_residues
MFKLADIPVSRKLALQLITALIGALILLTLSVTTLKSNLMAEREARLNAVLSLALSRIQALQQNLPLEQAQQAAKEMLNN
MRFDGDNYLFVIDETRHIIVHPVKPELVSQQMGNNGAEQYWFSMVELGRNGQQGVLQYPWVTGNGKKAQKMSLVMGFKPW
GWILGSGILLQDIENTIWHEYVLMGGTTLILILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQLAVTGKDELAAL
AHNINQSMASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQLATAMNEMSATIADVANNAESTAKDTKE
ATREAGLGDKDVHASVDGIHALAKEVEQATQQVNKLKEEIMQISEVTAVISAISDQTNLLALNAAIEAARAGEQGRGFAV
VADEVRQLASRTRQSTEEIQNTISLLQQRAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMATQIATAAE
EQSAVAEEMNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAFKL
>Mature_533_residues
MFKLADIPVSRKLALQLITALIGALILLTLSVTTLKSNLMAEREARLNAVLSLALSRIQALQQNLPLEQAQQAAKEMLNN
MRFDGDNYLFVIDETRHIIVHPVKPELVSQQMGNNGAEQYWFSMVELGRNGQQGVLQYPWVTGNGKKAQKMSLVMGFKPW
GWILGSGILLQDIENTIWHEYVLMGGTTLILILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQLAVTGKDELAAL
AHNINQSMASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQLATAMNEMSATIADVANNAESTAKDTKE
ATREAGLGDKDVHASVDGIHALAKEVEQATQQVNKLKEEIMQISEVTAVISAISDQTNLLALNAAIEAARAGEQGRGFAV
VADEVRQLASRTRQSTEEIQNTISLLQQRAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMATQIATAAE
EQSAVAEEMNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=312, Percent_Identity=32.6923076923077, Blast_Score=140, Evalue=3e-34,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=32.3529411764706, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI2367378, Length=301, Percent_Identity=29.9003322259136, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI1788194, Length=359, Percent_Identity=30.08356545961, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1789453, Length=307, Percent_Identity=28.6644951140065, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 57573; Mature: 57573

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLADIPVSRKLALQLITALIGALILLTLSVTTLKSNLMAEREARLNAVLSLALSRIQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQNLPLEQAQQAAKEMLNNMRFDGDNYLFVIDETRHIIVHPVKPELVSQQMGNNGAEQY
HHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHCCCCHHHH
WFSMVELGRNGQQGVLQYPWVTGNGKKAQKMSLVMGFKPWGWILGSGILLQDIENTIWHE
HHHHHHHCCCCCCCCEECCEECCCCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHH
YVLMGGTTLILILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQLAVTGKDELAAL
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCEEEECCHHHHHHH
AHNINQSMASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQLATAMNEM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SATIADVANNAESTAKDTKEATREAGLGDKDVHASVDGIHALAKEVEQATQQVNKLKEEI
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQISEVTAVISAISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTRQSTEEIQ
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
NTISLLQQRAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMATQIATAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EQSAVAEEMNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAFKL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MFKLADIPVSRKLALQLITALIGALILLTLSVTTLKSNLMAEREARLNAVLSLALSRIQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQNLPLEQAQQAAKEMLNNMRFDGDNYLFVIDETRHIIVHPVKPELVSQQMGNNGAEQY
HHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHCCCCHHHH
WFSMVELGRNGQQGVLQYPWVTGNGKKAQKMSLVMGFKPWGWILGSGILLQDIENTIWHE
HHHHHHHCCCCCCCCEECCEECCCCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHH
YVLMGGTTLILILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQLAVTGKDELAAL
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCEEEECCHHHHHHH
AHNINQSMASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQLATAMNEM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SATIADVANNAESTAKDTKEATREAGLGDKDVHASVDGIHALAKEVEQATQQVNKLKEEI
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQISEVTAVISAISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTRQSTEEIQ
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
NTISLLQQRAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMATQIATAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EQSAVAEEMNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAFKL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]