| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920777
Identifier: 117920777
GI number: 117920777
Start: 2809813
End: 2810319
Strand: Reverse
Name: 117920777
Synonym: Shewana3_2334
Alternate gene names: NA
Gene position: 2810319-2809813 (Counterclockwise)
Preceding gene: 117920778
Following gene: 117920776
Centisome position: 56.52
GC content: 48.13
Gene sequence:
>507_bases ATGGCACCAGCTATAAAAGTGCTCTTTCTATGTACCCACAATGCCTGTCGTAGCATCCTTGCGGAAGCCATCGGCCGAGA TCTTCTGATTAAGTTGGAGGATGTGACCTCTGCTAAATGGCAGTTTGCGAGTGCAGGCAGTGCTCCTGCGGGAGTGGTTC ATCCACAAACTTTATTGCAATTAGCTCATAGAGGCTATAGTACCGAGGGCCTCAGCAGTAAAAACTGGGATGTGATGGCT GATTTTACGCCCGATCTGGTGATTACTGTGTGTGATAGTGCCGCGGGAGAAACCTGCCCTCTATGGTTAGGCCACACACT CAAGTTGCATTGGGGGTTACCGGATCCAACATCAACAGATCCCGCCGATATGGATGCACAGTTTTCCAGTGTCATTGGCA CTCTTGAAAAACGTATAACAGCATTAATCTCCTTGCCGCTTTCGGCTGGTATTGATGCACAGAAGGTTTCTTTACAATCC ATTGCGAGTCAGTTTCCACTTACGTAA
Upstream 100 bases:
>100_bases GCGCGCTAGAGCCTGTTGCTAAAGATTGTCCGTAGCAAATAAATAAAAAATTTAATCCAAAATATATGAAATTTCATATA TTAAGTCGCCAGAGGTTGAT
Downstream 100 bases:
>100_bases AAAATGCACAGAGGCTTAAGTGGATGGTAATTCAATCCATAGTACAACCTATATCTTTTGCTGTGCTGTTTCGATATTGC TCAAGGAAGTCTGATTATGC
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: Arsenate Reductase; Protein-Tyrosine Phosphatase Low Molecular Weight; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Transcriptional Regulator ArsR Family; ArsR Family Transcriptional Regulator; Protein-Tyrosine-Phosphatase; Transcriptional Regulator/Arsenate Reductase; Protein ArsC; Transcriptional Regulator; Arsenate Reductase ArsC; Phosphatase; Protein-Tyrosine-Phosphatase Protein; Tyrosine Phosphatase; Arsenate Reductase Subunit ArsC; Arsenate Reductase / Phosphotyrosine Protein Phosphatase; ArsR Family Transcriptional Regulator Tyrosine Phosphatase; Arsenate Reductase Gene ARSC; Protein-Tyrosine Phosphatase
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MAPAIKVLFLCTHNACRSILAEAIGRDLLIKLEDVTSAKWQFASAGSAPAGVVHPQTLLQLAHRGYSTEGLSSKNWDVMA DFTPDLVITVCDSAAGETCPLWLGHTLKLHWGLPDPTSTDPADMDAQFSSVIGTLEKRITALISLPLSAGIDAQKVSLQS IASQFPLT
Sequences:
>Translated_168_residues MAPAIKVLFLCTHNACRSILAEAIGRDLLIKLEDVTSAKWQFASAGSAPAGVVHPQTLLQLAHRGYSTEGLSSKNWDVMA DFTPDLVITVCDSAAGETCPLWLGHTLKLHWGLPDPTSTDPADMDAQFSSVIGTLEKRITALISLPLSAGIDAQKVSLQS IASQFPLT >Mature_167_residues APAIKVLFLCTHNACRSILAEAIGRDLLIKLEDVTSAKWQFASAGSAPAGVVHPQTLLQLAHRGYSTEGLSSKNWDVMAD FTPDLVITVCDSAAGETCPLWLGHTLKLHWGLPDPTSTDPADMDAQFSSVIGTLEKRITALISLPLSAGIDAQKVSLQSI ASQFPLT
Specific function: Unknown
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17897; Mature: 17765
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPAIKVLFLCTHNACRSILAEAIGRDLLIKLEDVTSAKWQFASAGSAPAGVVHPQTLLQ CCCHHEEEHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHHHH LAHRGYSTEGLSSKNWDVMADFTPDLVITVCDSAAGETCPLWLGHTLKLHWGLPDPTSTD HHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEECCCEEEEEECCCCCCCCC PADMDAQFSSVIGTLEKRITALISLPLSAGIDAQKVSLQSIASQFPLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure APAIKVLFLCTHNACRSILAEAIGRDLLIKLEDVTSAKWQFASAGSAPAGVVHPQTLLQ CCHHEEEHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHHHH LAHRGYSTEGLSSKNWDVMADFTPDLVITVCDSAAGETCPLWLGHTLKLHWGLPDPTSTD HHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEECCCEEEEEECCCCCCCCC PADMDAQFSSVIGTLEKRITALISLPLSAGIDAQKVSLQSIASQFPLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA