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The map label for this gene is arsR [H]

Identifier: 117920778

GI number: 117920778

Start: 2810398

End: 2810745

Strand: Reverse

Name: arsR [H]

Synonym: Shewana3_2335

Alternate gene names: 117920778

Gene position: 2810745-2810398 (Counterclockwise)

Preceding gene: 117920779

Following gene: 117920777

Centisome position: 56.53

GC content: 45.98

Gene sequence:

>348_bases
ATGATTAATCCTACGCAATTTTTTAAATGTTTAGCCGACGAAACGCGCCTGCGTTGTTTGATGCTTATTCAGCACGAGGG
TGAGCTTTGCGTCTGTGAGTTGACCGAAGCGTTGCAGGAAATTCAACCCAAGATTTCACGGCATCTAGCCCAATTACGTA
AATGCGGATTGTTAGTCGATCGCCGCCAGGGGCAATGGATTTTCTATAGTATCAGTAATGACTTACCCGAATGGAGTAAG
TTAGTTTTGAGTGAGGTTACCAGCCACAATCCGGTATTTCTAGAAGAAAATATGCGAAATCTATGCAAGATGGGCGGTCG
CCCCGAGCGCGCTAGAGCCTGTTGCTAA

Upstream 100 bases:

>100_bases
GATCCCAGAATAGAATCGGGCACTCGTGGGTTTGAACAAACTTTTAGAGAACTCAACGAAAGAATAAAAATGTTTGTACT
CGTTCAGTCTAAGGATCTTA

Downstream 100 bases:

>100_bases
AGATTGTCCGTAGCAAATAAATAAAAAATTTAATCCAAAATATATGAAATTTCATATATTAAGTCGCCAGAGGTTGATAT
GGCACCAGCTATAAAAGTGC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MINPTQFFKCLADETRLRCLMLIQHEGELCVCELTEALQEIQPKISRHLAQLRKCGLLVDRRQGQWIFYSISNDLPEWSK
LVLSEVTSHNPVFLEENMRNLCKMGGRPERARACC

Sequences:

>Translated_115_residues
MINPTQFFKCLADETRLRCLMLIQHEGELCVCELTEALQEIQPKISRHLAQLRKCGLLVDRRQGQWIFYSISNDLPEWSK
LVLSEVTSHNPVFLEENMRNLCKMGGRPERARACC
>Mature_115_residues
MINPTQFFKCLADETRLRCLMLIQHEGELCVCELTEALQEIQPKISRHLAQLRKCGLLVDRRQGQWIFYSISNDLPEWSK
LVLSEVTSHNPVFLEENMRNLCKMGGRPERARACC

Specific function: Transcriptional repressor for the arsEFG operon. ArsE is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsE is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arse

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789916, Length=111, Percent_Identity=44.1441441441441, Blast_Score=99, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR018334
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 13378; Mature: 13378

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINPTQFFKCLADETRLRCLMLIQHEGELCVCELTEALQEIQPKISRHLAQLRKCGLLVD
CCCHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
RRQGQWIFYSISNDLPEWSKLVLSEVTSHNPVFLEENMRNLCKMGGRPERARACC
CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MINPTQFFKCLADETRLRCLMLIQHEGELCVCELTEALQEIQPKISRHLAQLRKCGLLVD
CCCHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
RRQGQWIFYSISNDLPEWSKLVLSEVTSHNPVFLEENMRNLCKMGGRPERARACC
CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721697; 8041620; 9278503 [H]