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The map label for this gene is yraQ [C]

Identifier: 117920776

GI number: 117920776

Start: 2808718

End: 2809716

Strand: Reverse

Name: yraQ [C]

Synonym: Shewana3_2333

Alternate gene names: 117920776

Gene position: 2809716-2808718 (Counterclockwise)

Preceding gene: 117920777

Following gene: 117920775

Centisome position: 56.51

GC content: 48.85

Gene sequence:

>999_bases
ATGCTGCAACTATTTTCCGATTTAGCGAGCTGGTTAACCTTTGGGGTGATGGGCCTAGATCCCAATACTAAGCTTGCAGA
TGCGGTACATTTTTTTATTGAAGATACCACTAAGATTTTTGCACTCCTGTTGCTGATGATTTATGCCATCGCCTTGGTGC
GGGCATCGCTCAATGTTGAGCGGGTGCGGGATTACTTAGCGGGTAAAAATCGCTTTATTGGGTATTTTATGGGCTCGGGC
TTCGGCGCTGTGACCCCATTCTGCTCATGTTCGAGCATTCCGGTATTTTTAGGTTTTACCTCCGCGGGGATCCCTGTGGG
GATCACTATGGCGTTTTTGATCACGTCACCGTTAATTAATGAAGTGGCCGTTCTGCTGCTGGTAAGTCTGTTGGGCTGGA
AGTTCACAGTGATATACGTGTTGGTCGGTATGTCGGTGGGGATACTCGCGGGCGCCTTTTTAGACACGATCCGCGCCGAA
CGTTGGCTGCAGTCCTTTGCGGCAAAAGCGCTTGAACAAGGTCAGGCGCAGGCGAGTCAAGATAATAGCGAGGATATGAC
ATCAACATCCATGACCTTCACCGAGCGACATGAGTTTGCAAAAGGCGAGACCCTAGAGATTTTTGGTCGGGTGTGGAAAT
GGGTCATTATTGGGGTCGGGCTTGGCGCCGCGCTCCATGGTTTTGTCCCCGATGGTTGGATTGAAGCCCACCTTGGCGAT
GGTCAGTGGTGGTCGGTTCCTGCCGCGGTATTGATTGGTATTCCCCTATATTCCAATGCGACAGGTGTCATTCCTATCAT
GGAAAGCCTTATTACTAATGGTCTTCCCATAGGCACGACATTGGCATTTTGTATGGCTACAGTAGCCGCGAGTTTCCCTG
AATTTATTTTACTAAAACAGGTGATGCAATGGCGTTTACTGGCCATTGTTTTTGCCATTTTATTGATTGCATTCACCCTG
ATAGGGTGGATATTTAACGCTATCAGTCCCATGCTGTGA

Upstream 100 bases:

>100_bases
GTAAAAAATGCACAGAGGCTTAAGTGGATGGTAATTCAATCCATAGTACAACCTATATCTTTTGCTGTGCTGTTTCGATA
TTGCTCAAGGAAGTCTGATT

Downstream 100 bases:

>100_bases
GGATTATAAAATGTTAAACATCAAAGTATTAGGTAGTGGTTGCACTAAATGCACTAAAACCGCCGAGATCATTACCGCCA
TTGCCAATGAGAAGGGAATC

Product: permease

Products: NA

Alternate protein names: Permease Superfamily; Permease Family Protein; Permease-Like Protein; Integral Membrane Protein

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLQLFSDLASWLTFGVMGLDPNTKLADAVHFFIEDTTKIFALLLLMIYAIALVRASLNVERVRDYLAGKNRFIGYFMGSG
FGAVTPFCSCSSIPVFLGFTSAGIPVGITMAFLITSPLINEVAVLLLVSLLGWKFTVIYVLVGMSVGILAGAFLDTIRAE
RWLQSFAAKALEQGQAQASQDNSEDMTSTSMTFTERHEFAKGETLEIFGRVWKWVIIGVGLGAALHGFVPDGWIEAHLGD
GQWWSVPAAVLIGIPLYSNATGVIPIMESLITNGLPIGTTLAFCMATVAASFPEFILLKQVMQWRLLAIVFAILLIAFTL
IGWIFNAISPML

Sequences:

>Translated_332_residues
MLQLFSDLASWLTFGVMGLDPNTKLADAVHFFIEDTTKIFALLLLMIYAIALVRASLNVERVRDYLAGKNRFIGYFMGSG
FGAVTPFCSCSSIPVFLGFTSAGIPVGITMAFLITSPLINEVAVLLLVSLLGWKFTVIYVLVGMSVGILAGAFLDTIRAE
RWLQSFAAKALEQGQAQASQDNSEDMTSTSMTFTERHEFAKGETLEIFGRVWKWVIIGVGLGAALHGFVPDGWIEAHLGD
GQWWSVPAAVLIGIPLYSNATGVIPIMESLITNGLPIGTTLAFCMATVAASFPEFILLKQVMQWRLLAIVFAILLIAFTL
IGWIFNAISPML
>Mature_332_residues
MLQLFSDLASWLTFGVMGLDPNTKLADAVHFFIEDTTKIFALLLLMIYAIALVRASLNVERVRDYLAGKNRFIGYFMGSG
FGAVTPFCSCSSIPVFLGFTSAGIPVGITMAFLITSPLINEVAVLLLVSLLGWKFTVIYVLVGMSVGILAGAFLDTIRAE
RWLQSFAAKALEQGQAQASQDNSEDMTSTSMTFTERHEFAKGETLEIFGRVWKWVIIGVGLGAALHGFVPDGWIEAHLGD
GQWWSVPAAVLIGIPLYSNATGVIPIMESLITNGLPIGTTLAFCMATVAASFPEFILLKQVMQWRLLAIVFAILLIAFTL
IGWIFNAISPML

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36133; Mature: 36133

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLFSDLASWLTFGVMGLDPNTKLADAVHFFIEDTTKIFALLLLMIYAIALVRASLNVE
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RVRDYLAGKNRFIGYFMGSGFGAVTPFCSCSSIPVFLGFTSAGIPVGITMAFLITSPLIN
HHHHHHCCCCCEEEEEECCCCCHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
EVAVLLLVSLLGWKFTVIYVLVGMSVGILAGAFLDTIRAERWLQSFAAKALEQGQAQASQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DNSEDMTSTSMTFTERHEFAKGETLEIFGRVWKWVIIGVGLGAALHGFVPDGWIEAHLGD
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
GQWWSVPAAVLIGIPLYSNATGVIPIMESLITNGLPIGTTLAFCMATVAASFPEFILLKQ
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH
VMQWRLLAIVFAILLIAFTLIGWIFNAISPML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLQLFSDLASWLTFGVMGLDPNTKLADAVHFFIEDTTKIFALLLLMIYAIALVRASLNVE
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RVRDYLAGKNRFIGYFMGSGFGAVTPFCSCSSIPVFLGFTSAGIPVGITMAFLITSPLIN
HHHHHHCCCCCEEEEEECCCCCHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
EVAVLLLVSLLGWKFTVIYVLVGMSVGILAGAFLDTIRAERWLQSFAAKALEQGQAQASQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DNSEDMTSTSMTFTERHEFAKGETLEIFGRVWKWVIIGVGLGAALHGFVPDGWIEAHLGD
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
GQWWSVPAAVLIGIPLYSNATGVIPIMESLITNGLPIGTTLAFCMATVAASFPEFILLKQ
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH
VMQWRLLAIVFAILLIAFTLIGWIFNAISPML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA