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The map label for this gene is wcaA [C]

Identifier: 117920451

GI number: 117920451

Start: 2392087

End: 2393142

Strand: Reverse

Name: wcaA [C]

Synonym: Shewana3_2006

Alternate gene names: 117920451

Gene position: 2393142-2392087 (Counterclockwise)

Preceding gene: 117920452

Following gene: 117920450

Centisome position: 48.13

GC content: 49.05

Gene sequence:

>1056_bases
ATGATCCCTACCGTCTCTGTGGTGATGCCGGTCTATAATGTGGAAGCTTTTGTCTCAAAAGCGATTTCCTCAGTATTAGC
TCAAAGTTTTACGGATTTTGAGCTCATCATAGTCAATGACTGTGCCACCGATAATAGCCTCGCTCGCTGTAAACAATTTT
GCGACAGCCGCATTCGTATCGTGCAGCATGCCGTGAATAAGGGCTTAGCCGCCGCACGTAATACCGGCATACGCCATGCG
ATTGGTCGCTATGTGGCCTTTATCGATTCGGACGACCTCTGGCATCCGGATAAGTTAAAGCTGCATGTGGATCATCTACA
AAAATCGCCCAAGGTGGGGATCAGCTTCTCGCGTTCAAGCTTTATCGATTACCGGGGTAACCCGATCAACTTTTACCAGA
TGCCGCAGCTCACAGACATAGATGCTGGCCATTTGCTTTGCCGCAATCCGGTGGGCAATGGTTCAGCGCCGGTGATCCGC
CGCGAGACCTTAAATGACATTCGCTTCCAAGCACTGAACCACAGCGAGCATTACACTTGTTACTTCGATGAACAATTTCG
CCAATCGGAAGATATCGAGTGTTGGTTTCGCATCGTGGCGACAACCGAGTGGCAAATGGAGGGGATCCCCGAGCCATTAA
CTTACTACCGCTTAAACCACGGCGGCTTATCGGCGAATTTAGTGAAACAGTTGGCATCTTGGGAGCAAATGGTCACTAAG
GCACGCCGTTATGCCCCTAAGATCCTGTTAAAGCATGAAAATGCTGCCAGAGCCTATCAGCTTCGCTACTTAGCCAGGCA
AGCCATTCGCCTAGGCGATGGTCGTATGGCGAAAAACTTAGTCAATCAAGCGCTGCTGACTTCACCACAGATCTTATTCA
AGGAAACCAATCGCACCCTTACCACGCTGATTGCGGCCTATTTGCAATGGTTAATGCCCCGAGGTTTATACCAAATGTGC
GAAACCCTTGGGCAAAAGTACCTAGGTTATCGCCAACGTTTGCAAATCAAACGTGATGGTGTGACGGCAAGCTTACTCAC
CACCCAATTAAAATAA

Upstream 100 bases:

>100_bases
GTTACCTCATTTGTATGCCGTTATTTGCCTACTTTGTGATGAAACCCATAGCAGAAAAACTGCGTTTACCCACCTTATCC
CCTTCATTAGGAGGTTCATT

Downstream 100 bases:

>100_bases
GTCAAATCGACGCGACAGCAAACGTTGCATATTCATCGTACAGATTCAAGGCGGCTCAGTGAGCCGCCTTGCTTTTGTCG
TAGGTTAGTCTCTAATGCAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MIPTVSVVMPVYNVEAFVSKAISSVLAQSFTDFELIIVNDCATDNSLARCKQFCDSRIRIVQHAVNKGLAAARNTGIRHA
IGRYVAFIDSDDLWHPDKLKLHVDHLQKSPKVGISFSRSSFIDYRGNPINFYQMPQLTDIDAGHLLCRNPVGNGSAPVIR
RETLNDIRFQALNHSEHYTCYFDEQFRQSEDIECWFRIVATTEWQMEGIPEPLTYYRLNHGGLSANLVKQLASWEQMVTK
ARRYAPKILLKHENAARAYQLRYLARQAIRLGDGRMAKNLVNQALLTSPQILFKETNRTLTTLIAAYLQWLMPRGLYQMC
ETLGQKYLGYRQRLQIKRDGVTASLLTTQLK

Sequences:

>Translated_351_residues
MIPTVSVVMPVYNVEAFVSKAISSVLAQSFTDFELIIVNDCATDNSLARCKQFCDSRIRIVQHAVNKGLAAARNTGIRHA
IGRYVAFIDSDDLWHPDKLKLHVDHLQKSPKVGISFSRSSFIDYRGNPINFYQMPQLTDIDAGHLLCRNPVGNGSAPVIR
RETLNDIRFQALNHSEHYTCYFDEQFRQSEDIECWFRIVATTEWQMEGIPEPLTYYRLNHGGLSANLVKQLASWEQMVTK
ARRYAPKILLKHENAARAYQLRYLARQAIRLGDGRMAKNLVNQALLTSPQILFKETNRTLTTLIAAYLQWLMPRGLYQMC
ETLGQKYLGYRQRLQIKRDGVTASLLTTQLK
>Mature_351_residues
MIPTVSVVMPVYNVEAFVSKAISSVLAQSFTDFELIIVNDCATDNSLARCKQFCDSRIRIVQHAVNKGLAAARNTGIRHA
IGRYVAFIDSDDLWHPDKLKLHVDHLQKSPKVGISFSRSSFIDYRGNPINFYQMPQLTDIDAGHLLCRNPVGNGSAPVIR
RETLNDIRFQALNHSEHYTCYFDEQFRQSEDIECWFRIVATTEWQMEGIPEPLTYYRLNHGGLSANLVKQLASWEQMVTK
ARRYAPKILLKHENAARAYQLRYLARQAIRLGDGRMAKNLVNQALLTSPQILFKETNRTLTTLIAAYLQWLMPRGLYQMC
ETLGQKYLGYRQRLQIKRDGVTASLLTTQLK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788372, Length=268, Percent_Identity=25.3731343283582, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1790044, Length=94, Percent_Identity=39.3617021276596, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787259, Length=113, Percent_Identity=32.7433628318584, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 40187; Mature: 40187

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPTVSVVMPVYNVEAFVSKAISSVLAQSFTDFELIIVNDCATDNSLARCKQFCDSRIRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
VQHAVNKGLAAARNTGIRHAIGRYVAFIDSDDLWHPDKLKLHVDHLQKSPKVGISFSRSS
HHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCCCCHHEEEHHHHCCCCCCCEEECCCC
FIDYRGNPINFYQMPQLTDIDAGHLLCRNPVGNGSAPVIRRETLNDIRFQALNHSEHYTC
EEECCCCEECEEECCCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHEECCCCCEEE
YFDEQFRQSEDIECWFRIVATTEWQMEGIPEPLTYYRLNHGGLSANLVKQLASWEQMVTK
EECHHHCCCCCHHHHHHHHHCCCHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHH
ARRYAPKILLKHENAARAYQLRYLARQAIRLGDGRMAKNLVNQALLTSPQILFKETNRTL
HHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCHHH
TTLIAAYLQWLMPRGLYQMCETLGQKYLGYRQRLQIKRDGVTASLLTTQLK
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure
MIPTVSVVMPVYNVEAFVSKAISSVLAQSFTDFELIIVNDCATDNSLARCKQFCDSRIRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
VQHAVNKGLAAARNTGIRHAIGRYVAFIDSDDLWHPDKLKLHVDHLQKSPKVGISFSRSS
HHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCCCCHHEEEHHHHCCCCCCCEEECCCC
FIDYRGNPINFYQMPQLTDIDAGHLLCRNPVGNGSAPVIRRETLNDIRFQALNHSEHYTC
EEECCCCEECEEECCCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHEECCCCCEEE
YFDEQFRQSEDIECWFRIVATTEWQMEGIPEPLTYYRLNHGGLSANLVKQLASWEQMVTK
EECHHHCCCCCHHHHHHHHHCCCHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHH
ARRYAPKILLKHENAARAYQLRYLARQAIRLGDGRMAKNLVNQALLTSPQILFKETNRTL
HHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCHHH
TTLIAAYLQWLMPRGLYQMCETLGQKYLGYRQRLQIKRDGVTASLLTTQLK
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]