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The map label for this gene is tuaB [H]

Identifier: 117920452

GI number: 117920452

Start: 2393139

End: 2394467

Strand: Reverse

Name: tuaB [H]

Synonym: Shewana3_2007

Alternate gene names: 117920452

Gene position: 2394467-2393139 (Counterclockwise)

Preceding gene: 117920453

Following gene: 117920451

Centisome position: 48.16

GC content: 48.53

Gene sequence:

>1329_bases
ATGAGCAAGTGGGCATGGATACAAACCCTTAAGTACAACCAAGGTATTCGCCAATTGGGTAGCAGCATACTGTGGTTAGG
CTCAGCCCAAGTCGGCGGGCGTATTGTGCGCCTTGGTTGCAGCATTATCTTAGCCCGTTTACTTACCCCCGAGGTCTTTG
GCCAAGTCGCGATCATTCTGACCAGTTTTGAAATAGTCAGCATTTTTATTCGCAGGATCACCTCGGCATCACTGATCAAG
ATGGACGATAGCGCCTTTGCTTCTCATCTCGCCAGCGCCAATCTGATCAATATTTTTGTGTGTGTACTGTCTTTTGTTGC
CTTGAGCTTACTCAGTGGCCTGTTAGCGATTTACTATCAAGACGCACAGATAGTGAAGCCTATGATACTCATGGCAACAA
GCTATTTGCTCCTCCCCTTTGGCATGCTGCATGCCGCCGCCAACCTACGCCAAAATAAGATGCGTATCGTCGCCAAGGCC
AACCTGTGGCAGACGGTGGCCGACAGTGTGCTCACCGCTATCTTAGCGTTATGCGGTATGGGGATCTGGGGGATTATTCT
ACCTAAAGTGCTGGTGGTGTTGATTTGGATAGCCGTGCATAGGCAGCATTCTGGTATCCATAATATTCACACTGCCCCAC
TCGCGCGTTCTTTCTGCCAGATAAACTTAACTCAATGTAAATCACTATTTCGCTTTGGTACTCAGGTGGCGCTTGGGGAT
CTTTGCCTCGCCCTGAGACAAAATATTGATTATTTATTAGTGGGTTACTTTTTAGGTGTTGAGGCGCTTGGGATCTATTT
CTTCGCGGTCAATACCAGCCTTGGGATTAGCTTAGGGTTAATTCAAAGCTTTGGCACCGCCTTCTATTCACATCTTTGTC
AGAGTGATGGTGAAGATCCGCTGCTTAAATACCGCCACGGTCTGCTGAGTATCATGCTAGTGACCTTGCCTATCATAGGC
TTACAAAGCGCGCTCGCCCCTTGGTATTTACCGCTAGTGTATGGCCAACATTGGCTTGAAGCTGGCGCGCTGCCGGTCTT
TATTCTGCTCTGTTTGAGTGGTTTAACGCGTCCCTTGGGTGAAGCCGCGAGTCAACTACTGATCTCCTGCGAGCTTAGTA
AGCTGAACTTAGTCTCAAATGTCGGCTTTATTGGCCTATTGGCGTTGAGTATCAGCCTCGGCACCCTGTGGGGGCTGAAA
GGCGTCGCCATGGGCATCTTCCTCTGTTACCTCATTTGTATGCCGTTATTTGCCTACTTTGTGATGAAACCCATAGCAGA
AAAACTGCGTTTACCCACCTTATCCCCTTCATTAGGAGGTTCATTATGA

Upstream 100 bases:

>100_bases
ATAAGCTAACAATATGTTTTTAAATGGAAAAATAAAACACAAAAAGCTGGCATAGAAACTGAATAGTCAACATAGGCACT
CTTAACTGATAGGTGTTGCG

Downstream 100 bases:

>100_bases
TCCCTACCGTCTCTGTGGTGATGCCGGTCTATAATGTGGAAGCTTTTGTCTCAAAAGCGATTTCCTCAGTATTAGCTCAA
AGTTTTACGGATTTTGAGCT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSKWAWIQTLKYNQGIRQLGSSILWLGSAQVGGRIVRLGCSIILARLLTPEVFGQVAIILTSFEIVSIFIRRITSASLIK
MDDSAFASHLASANLINIFVCVLSFVALSLLSGLLAIYYQDAQIVKPMILMATSYLLLPFGMLHAAANLRQNKMRIVAKA
NLWQTVADSVLTAILALCGMGIWGIILPKVLVVLIWIAVHRQHSGIHNIHTAPLARSFCQINLTQCKSLFRFGTQVALGD
LCLALRQNIDYLLVGYFLGVEALGIYFFAVNTSLGISLGLIQSFGTAFYSHLCQSDGEDPLLKYRHGLLSIMLVTLPIIG
LQSALAPWYLPLVYGQHWLEAGALPVFILLCLSGLTRPLGEAASQLLISCELSKLNLVSNVGFIGLLALSISLGTLWGLK
GVAMGIFLCYLICMPLFAYFVMKPIAEKLRLPTLSPSLGGSL

Sequences:

>Translated_442_residues
MSKWAWIQTLKYNQGIRQLGSSILWLGSAQVGGRIVRLGCSIILARLLTPEVFGQVAIILTSFEIVSIFIRRITSASLIK
MDDSAFASHLASANLINIFVCVLSFVALSLLSGLLAIYYQDAQIVKPMILMATSYLLLPFGMLHAAANLRQNKMRIVAKA
NLWQTVADSVLTAILALCGMGIWGIILPKVLVVLIWIAVHRQHSGIHNIHTAPLARSFCQINLTQCKSLFRFGTQVALGD
LCLALRQNIDYLLVGYFLGVEALGIYFFAVNTSLGISLGLIQSFGTAFYSHLCQSDGEDPLLKYRHGLLSIMLVTLPIIG
LQSALAPWYLPLVYGQHWLEAGALPVFILLCLSGLTRPLGEAASQLLISCELSKLNLVSNVGFIGLLALSISLGTLWGLK
GVAMGIFLCYLICMPLFAYFVMKPIAEKLRLPTLSPSLGGSL
>Mature_441_residues
SKWAWIQTLKYNQGIRQLGSSILWLGSAQVGGRIVRLGCSIILARLLTPEVFGQVAIILTSFEIVSIFIRRITSASLIKM
DDSAFASHLASANLINIFVCVLSFVALSLLSGLLAIYYQDAQIVKPMILMATSYLLLPFGMLHAAANLRQNKMRIVAKAN
LWQTVADSVLTAILALCGMGIWGIILPKVLVVLIWIAVHRQHSGIHNIHTAPLARSFCQINLTQCKSLFRFGTQVALGDL
CLALRQNIDYLLVGYFLGVEALGIYFFAVNTSLGISLGLIQSFGTAFYSHLCQSDGEDPLLKYRHGLLSIMLVTLPIIGL
QSALAPWYLPLVYGQHWLEAGALPVFILLCLSGLTRPLGEAASQLLISCELSKLNLVSNVGFIGLLALSISLGTLWGLKG
VAMGIFLCYLICMPLFAYFVMKPIAEKLRLPTLSPSLGGSL

Specific function: Might be involved in the translocation of teichuronic acid repeating units from the inner to the outer surface of the membrane [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 48168; Mature: 48037

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKWAWIQTLKYNQGIRQLGSSILWLGSAQVGGRIVRLGCSIILARLLTPEVFGQVAIIL
CCCCHHHHHHHHHHHHHHHCCHHEEECCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHH
TSFEIVSIFIRRITSASLIKMDDSAFASHLASANLINIFVCVLSFVALSLLSGLLAIYYQ
HHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DAQIVKPMILMATSYLLLPFGMLHAAANLRQNKMRIVAKANLWQTVADSVLTAILALCGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHCC
GIWGIILPKVLVVLIWIAVHRQHSGIHNIHTAPLARSFCQINLTQCKSLFRFGTQVALGD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LCLALRQNIDYLLVGYFLGVEALGIYFFAVNTSLGISLGLIQSFGTAFYSHLCQSDGEDP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
LLKYRHGLLSIMLVTLPIIGLQSALAPWYLPLVYGQHWLEAGALPVFILLCLSGLTRPLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHH
EAASQLLISCELSKLNLVSNVGFIGLLALSISLGTLWGLKGVAMGIFLCYLICMPLFAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMKPIAEKLRLPTLSPSLGGSL
HHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SKWAWIQTLKYNQGIRQLGSSILWLGSAQVGGRIVRLGCSIILARLLTPEVFGQVAIIL
CCCHHHHHHHHHHHHHHHCCHHEEECCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHH
TSFEIVSIFIRRITSASLIKMDDSAFASHLASANLINIFVCVLSFVALSLLSGLLAIYYQ
HHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DAQIVKPMILMATSYLLLPFGMLHAAANLRQNKMRIVAKANLWQTVADSVLTAILALCGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHCC
GIWGIILPKVLVVLIWIAVHRQHSGIHNIHTAPLARSFCQINLTQCKSLFRFGTQVALGD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LCLALRQNIDYLLVGYFLGVEALGIYFFAVNTSLGISLGLIQSFGTAFYSHLCQSDGEDP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
LLKYRHGLLSIMLVTLPIIGLQSALAPWYLPLVYGQHWLEAGALPVFILLCLSGLTRPLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHH
EAASQLLISCELSKLNLVSNVGFIGLLALSISLGTLWGLKGVAMGIFLCYLICMPLFAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMKPIAEKLRLPTLSPSLGGSL
HHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]