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The map label for this gene is cpsE [H]

Identifier: 117920450

GI number: 117920450

Start: 2389743

End: 2391692

Strand: Reverse

Name: cpsE [H]

Synonym: Shewana3_2005

Alternate gene names: 117920450

Gene position: 2391692-2389743 (Counterclockwise)

Preceding gene: 117920451

Following gene: 117920449

Centisome position: 48.1

GC content: 49.23

Gene sequence:

>1950_bases
ATGAATACTCAGAACTCGACTCAAGTACGCTGGTCTATTCGATTATTCGATAGCGCCATTGCGATGCTGGCCTTATTGCT
CTGCTCACCTTTTATTCTTGTGGTTTACCTTTACCGCAAGTCACAGGGACAAAGTGTATTCGAACGTGTGTATGTGCATG
GTGGCCGTAATCAAATTGGTCTGTGGCAATTTGCCTACCAAGGCGCAGGATATCGTCTCCCCCAACTGTTTAATTTACTC
AAAGGAGATATCGGCCTATTAGGTGTTGAAGCCCAATTTGCCTTCACGCCTTTAGTCGATTTACCTCAAGTTAATCGTAT
TGATCGAGTGGGTATATTTTCCATCAGTGCTATGCAGCGCCGAATGGGGATTGACTTTGAATCCAGTGAGAAAAGCTTAA
ACATCGCCTATTCGAGCTTAAGCCGTTACTTCTTTGCGCTGCTAAGCGCTATTTTGAATAGCCTTTTGACCTCTGCTTCA
CGCTCCCACACTAACCAAGTCACGATTTTTGGCGTGACCATGCGTAACCTCAGCATGACAGGCATGCTCGACATGCTAGT
ACAACAAGCACAGCACCCAAAACACCACTTAACCCCATTTTCCTTTGTGAATGCCGACTGTTTAAACAAAGCCTATTGCG
ATCCCCAGTACCATCAGATTTTGAATCAATGTGAAGCCGTTTTTGCCGATGGCATAGGGGTACGTATGGCTTGCCGCTGG
CAAGGCGTGGATCTCAGGGGCAATTTAAATGGCACAGATATGTTGCCACTCTTATGTGAGCGCCTGATTGCAGCCAATCT
GTCTCTCTATCTGCTGGGCGGCGCGCCAGAAGTCGCCCACCAAGCCGCCGAACAGCTTCAGTGTCGTTTCCCACAATTAA
AAATTGCAGGCACCCACCATGGTTATTTCCATGAGGCAGATACCAAGCAAGTGATTAAAAAGATTAATCAATCTGGCGCT
GCCGTGCTGTTGGTGGCCATGGGCGCCCCTAAACAAGAGCTATGGTTGAATCAATATCAAGCAAAACTTACTCCTGCGGT
CGGTATTGGTGTGGGCGGACTGTTCGACTTTTACTCCAATCGTATTAGCCGCGCGCCACTTTGGTTAAGGCAAATTGGCA
TGGAGTGGATCTGGCGCTTAATGCAAGAGCCCAAGAGAATGTGGCGCCGCTACATTATCGGTAATCCCCTGTTTTTATAT
CGGGTATTCAAAGAACTGCGTGCTAACGCCAGCCTTAATGCAAAGACTCAAGCTGACGTACAACAAACACCCGCTACGCC
CCAGTTTCCTAACTTAAGTGACTCAGGCTCACTGAAACGCTGCAAACGCATCCGCTTGCATCTGCTATTGAACCGCATCG
TTAAACGTTGCCTCGATATCTTAGTCGCGGCCATCGCCATACTGTTACTATCGCCTCTACTGTTGATCGTTGCACTGCTT
ATTCGATTGGAATCCCCAGGCGCCGTGCTGTTTTGCCAGCAGCGCGTCGGCAAGTGGAATCAACCTTTTACCATGTGGAA
ATTCCGCTCCATGTATCAGGACGCCGAAACGCGACTGGCCAGCTTACAACAGGCGAACGAAATGCAAGGCGGCGTCCTAT
TTAAGATGAAACAGGACCCCAGGATCACCCGTGTCGGTCAATTTATCCGTAAAACCTCCATCGATGAGCTGCCACAGCTA
TGGAATGTACTCAAGGGCGAGATGTCACTGGTTGGCCCGCGCCCCGCGCTACCACGAGAAGTCGCGCAATACAGTCCAAG
CGATCGCCGCCGCTTAGAAGTTAAACCCGGCATAACCTGCATCTGGCAAGTATCGGGTCGCTCCGACATTCCCTTCGACC
GTCAGGTTGAGTTGGATGTGGATTATATCTACCAACAATCCTTAATGGCGGATCTGTCCTTGCTTATCAAGACCATACCC
GCCGTGATTTTCAGCCGTGGTGCCTACTAA

Upstream 100 bases:

>100_bases
CAATCTGGCCTGCATTATGCTTTGTGACTCTTGCCAAGCGCAGCTATAAGCGGTTATCGAGCGTCCCGCTTAGCATCAAG
CAAATTGCATGGAGGTCATG

Downstream 100 bases:

>100_bases
GGGGGTTACTATGCAAGCCATTATTTTCGCCAATCGCCATGGACACGAACTGACACCGCTGGATAAACAATACTGCCCAG
CATTACTCCCCATGGGAAAC

Product: WecB/TagA/CpsF family glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 649

Protein sequence:

>649_residues
MNTQNSTQVRWSIRLFDSAIAMLALLLCSPFILVVYLYRKSQGQSVFERVYVHGGRNQIGLWQFAYQGAGYRLPQLFNLL
KGDIGLLGVEAQFAFTPLVDLPQVNRIDRVGIFSISAMQRRMGIDFESSEKSLNIAYSSLSRYFFALLSAILNSLLTSAS
RSHTNQVTIFGVTMRNLSMTGMLDMLVQQAQHPKHHLTPFSFVNADCLNKAYCDPQYHQILNQCEAVFADGIGVRMACRW
QGVDLRGNLNGTDMLPLLCERLIAANLSLYLLGGAPEVAHQAAEQLQCRFPQLKIAGTHHGYFHEADTKQVIKKINQSGA
AVLLVAMGAPKQELWLNQYQAKLTPAVGIGVGGLFDFYSNRISRAPLWLRQIGMEWIWRLMQEPKRMWRRYIIGNPLFLY
RVFKELRANASLNAKTQADVQQTPATPQFPNLSDSGSLKRCKRIRLHLLLNRIVKRCLDILVAAIAILLLSPLLLIVALL
IRLESPGAVLFCQQRVGKWNQPFTMWKFRSMYQDAETRLASLQQANEMQGGVLFKMKQDPRITRVGQFIRKTSIDELPQL
WNVLKGEMSLVGPRPALPREVAQYSPSDRRRLEVKPGITCIWQVSGRSDIPFDRQVELDVDYIYQQSLMADLSLLIKTIP
AVIFSRGAY

Sequences:

>Translated_649_residues
MNTQNSTQVRWSIRLFDSAIAMLALLLCSPFILVVYLYRKSQGQSVFERVYVHGGRNQIGLWQFAYQGAGYRLPQLFNLL
KGDIGLLGVEAQFAFTPLVDLPQVNRIDRVGIFSISAMQRRMGIDFESSEKSLNIAYSSLSRYFFALLSAILNSLLTSAS
RSHTNQVTIFGVTMRNLSMTGMLDMLVQQAQHPKHHLTPFSFVNADCLNKAYCDPQYHQILNQCEAVFADGIGVRMACRW
QGVDLRGNLNGTDMLPLLCERLIAANLSLYLLGGAPEVAHQAAEQLQCRFPQLKIAGTHHGYFHEADTKQVIKKINQSGA
AVLLVAMGAPKQELWLNQYQAKLTPAVGIGVGGLFDFYSNRISRAPLWLRQIGMEWIWRLMQEPKRMWRRYIIGNPLFLY
RVFKELRANASLNAKTQADVQQTPATPQFPNLSDSGSLKRCKRIRLHLLLNRIVKRCLDILVAAIAILLLSPLLLIVALL
IRLESPGAVLFCQQRVGKWNQPFTMWKFRSMYQDAETRLASLQQANEMQGGVLFKMKQDPRITRVGQFIRKTSIDELPQL
WNVLKGEMSLVGPRPALPREVAQYSPSDRRRLEVKPGITCIWQVSGRSDIPFDRQVELDVDYIYQQSLMADLSLLIKTIP
AVIFSRGAY
>Mature_649_residues
MNTQNSTQVRWSIRLFDSAIAMLALLLCSPFILVVYLYRKSQGQSVFERVYVHGGRNQIGLWQFAYQGAGYRLPQLFNLL
KGDIGLLGVEAQFAFTPLVDLPQVNRIDRVGIFSISAMQRRMGIDFESSEKSLNIAYSSLSRYFFALLSAILNSLLTSAS
RSHTNQVTIFGVTMRNLSMTGMLDMLVQQAQHPKHHLTPFSFVNADCLNKAYCDPQYHQILNQCEAVFADGIGVRMACRW
QGVDLRGNLNGTDMLPLLCERLIAANLSLYLLGGAPEVAHQAAEQLQCRFPQLKIAGTHHGYFHEADTKQVIKKINQSGA
AVLLVAMGAPKQELWLNQYQAKLTPAVGIGVGGLFDFYSNRISRAPLWLRQIGMEWIWRLMQEPKRMWRRYIIGNPLFLY
RVFKELRANASLNAKTQADVQQTPATPQFPNLSDSGSLKRCKRIRLHLLLNRIVKRCLDILVAAIAILLLSPLLLIVALL
IRLESPGAVLFCQQRVGKWNQPFTMWKFRSMYQDAETRLASLQQANEMQGGVLFKMKQDPRITRVGQFIRKTSIDELPQL
WNVLKGEMSLVGPRPALPREVAQYSPSDRRRLEVKPGITCIWQVSGRSDIPFDRQVELDVDYIYQQSLMADLSLLIKTIP
AVIFSRGAY

Specific function: Galactosyl transferase is essential for the assembly of the group B streptococci (GBS) type III capsular polysaccharide. May be involved in the formation of either or both galactosidic bonds by catalyzing the addition of galactose to an oligosaccharide pr

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=208, Percent_Identity=37.9807692307692, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI2367289, Length=233, Percent_Identity=28.3261802575107, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 73527; Mature: 73527

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQNSTQVRWSIRLFDSAIAMLALLLCSPFILVVYLYRKSQGQSVFERVYVHGGRNQIG
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
LWQFAYQGAGYRLPQLFNLLKGDIGLLGVEAQFAFTPLVDLPQVNRIDRVGIFSISAMQR
HHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCEEHHHHHHH
RMGIDFESSEKSLNIAYSSLSRYFFALLSAILNSLLTSASRSHTNQVTIFGVTMRNLSMT
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHCCHH
GMLDMLVQQAQHPKHHLTPFSFVNADCLNKAYCDPQYHQILNQCEAVFADGIGVRMACRW
HHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEE
QGVDLRGNLNGTDMLPLLCERLIAANLSLYLLGGAPEVAHQAAEQLQCRFPQLKIAGTHH
ECCEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCC
GYFHEADTKQVIKKINQSGAAVLLVAMGAPKQELWLNQYQAKLTPAVGIGVGGLFDFYSN
CCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH
RISRAPLWLRQIGMEWIWRLMQEPKRMWRRYIIGNPLFLYRVFKELRANASLNAKTQADV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHH
QQTPATPQFPNLSDSGSLKRCKRIRLHLLLNRIVKRCLDILVAAIAILLLSPLLLIVALL
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRLESPGAVLFCQQRVGKWNQPFTMWKFRSMYQDAETRLASLQQANEMQGGVLFKMKQDP
HHCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
RITRVGQFIRKTSIDELPQLWNVLKGEMSLVGPRPALPREVAQYSPSDRRRLEVKPGITC
CHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHCCCCCCCEEEECCCEEE
IWQVSGRSDIPFDRQVELDVDYIYQQSLMADLSLLIKTIPAVIFSRGAY
EEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTQNSTQVRWSIRLFDSAIAMLALLLCSPFILVVYLYRKSQGQSVFERVYVHGGRNQIG
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
LWQFAYQGAGYRLPQLFNLLKGDIGLLGVEAQFAFTPLVDLPQVNRIDRVGIFSISAMQR
HHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCEEHHHHHHH
RMGIDFESSEKSLNIAYSSLSRYFFALLSAILNSLLTSASRSHTNQVTIFGVTMRNLSMT
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHCCHH
GMLDMLVQQAQHPKHHLTPFSFVNADCLNKAYCDPQYHQILNQCEAVFADGIGVRMACRW
HHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEE
QGVDLRGNLNGTDMLPLLCERLIAANLSLYLLGGAPEVAHQAAEQLQCRFPQLKIAGTHH
ECCEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCC
GYFHEADTKQVIKKINQSGAAVLLVAMGAPKQELWLNQYQAKLTPAVGIGVGGLFDFYSN
CCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH
RISRAPLWLRQIGMEWIWRLMQEPKRMWRRYIIGNPLFLYRVFKELRANASLNAKTQADV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHH
QQTPATPQFPNLSDSGSLKRCKRIRLHLLLNRIVKRCLDILVAAIAILLLSPLLLIVALL
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRLESPGAVLFCQQRVGKWNQPFTMWKFRSMYQDAETRLASLQQANEMQGGVLFKMKQDP
HHCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
RITRVGQFIRKTSIDELPQLWNVLKGEMSLVGPRPALPREVAQYSPSDRRRLEVKPGITC
CHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHCCCCCCCEEEECCCEEE
IWQVSGRSDIPFDRQVELDVDYIYQQSLMADLSLLIKTIPAVIFSRGAY
EEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8355611; 10913080; 11773119; 12354221 [H]