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The map label for this gene is yebC [C]

Identifier: 117920399

GI number: 117920399

Start: 2326104

End: 2326850

Strand: Direct

Name: yebC [C]

Synonym: Shewana3_1954

Alternate gene names: 117920399

Gene position: 2326104-2326850 (Clockwise)

Preceding gene: 117920398

Following gene: 117920400

Centisome position: 46.78

GC content: 52.34

Gene sequence:

>747_bases
ATGGCAGGTCATAGTAAGTGGGCCAACATTAAACACCGCAAAGCAGCGCAAGATGCCAAACGCGGTAAACTCTTTACCAA
ATTTATCCGCGAGTTAACGGTTTCAGCCCGTGAAGGTGGCTCGGATCCCGATTCAAACCCGCGTCTGCGTATCGCTATCG
ATAAAGCGCTTGGCGGCAACATGACCCGCGACACCATTGAGCGCGCAATTAAACGTGGCGCCGGTGAGCTTGAAGGTCAG
CAACTCGAAACCATTATTTACGAAGGCTATGGCCCTGGCGGCACCGCTGTGATGGTCGAGACCATGACAGATAACCGTAA
CCGTACCGTGAGCGGCGTGCGTAATGCCTTTAGTAAATCGGGTGGGAATTTAGGGACCGATGGTTCGGTTGCCTATTTGT
TCACTAAGCGCGGCGTGTTGTCCTATGCGCCGGGTACTGATGAAGACGCCCTGATGGACGCGGCGCTAGAAGCGGGCGCC
GAAGATGTGGTGAGTTACGATGATGGTGCAATTGACGTATTTACCGAACCGACCGAGTTTTATGGGGTGAAAGATGCCCT
CGATGCGGCGGGATTTGTCAGTGATAACGCCGAAATCGCGATGATAGCCTCGACCAAAGCGGAGTTAGATGCCGAGACGG
CGGAGAAGTTTATGCGTCTTATCGATACCCTCGAAGAGCACGATGATGTGCAAGAGGTGTATCATAATGCCGAAATCTCC
GATGAGATTATGGAAAGTTTAGGGTAA

Upstream 100 bases:

>100_bases
TAAAGGAACATTGGCTGTTGGAACCTCACAAGAGGCGCCGTCAAGGTTACCTTAGGCTATTGATAAGATGTGCAATGGCT
ATGTGTAGAGGAGAACTCCC

Downstream 100 bases:

>100_bases
ACCCAAGCTGAAATTTGATTTTTATCTGAGTAGGTGGCCGGAACTGAGCTCGACAGAGCTTGGTTCTTACATAGAGCAAG
CGTTTAACACTGAGCTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSAREGGSDPDSNPRLRIAIDKALGGNMTRDTIERAIKRGAGELEGQ
QLETIIYEGYGPGGTAVMVETMTDNRNRTVSGVRNAFSKSGGNLGTDGSVAYLFTKRGVLSYAPGTDEDALMDAALEAGA
EDVVSYDDGAIDVFTEPTEFYGVKDALDAAGFVSDNAEIAMIASTKAELDAETAEKFMRLIDTLEEHDDVQEVYHNAEIS
DEIMESLG

Sequences:

>Translated_248_residues
MAGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSAREGGSDPDSNPRLRIAIDKALGGNMTRDTIERAIKRGAGELEGQ
QLETIIYEGYGPGGTAVMVETMTDNRNRTVSGVRNAFSKSGGNLGTDGSVAYLFTKRGVLSYAPGTDEDALMDAALEAGA
EDVVSYDDGAIDVFTEPTEFYGVKDALDAAGFVSDNAEIAMIASTKAELDAETAEKFMRLIDTLEEHDDVQEVYHNAEIS
DEIMESLG
>Mature_247_residues
AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSAREGGSDPDSNPRLRIAIDKALGGNMTRDTIERAIKRGAGELEGQQ
LETIIYEGYGPGGTAVMVETMTDNRNRTVSGVRNAFSKSGGNLGTDGSVAYLFTKRGVLSYAPGTDEDALMDAALEAGAE
DVVSYDDGAIDVFTEPTEFYGVKDALDAAGFVSDNAEIAMIASTKAELDAETAEKFMRLIDTLEEHDDVQEVYHNAEISD
EIMESLG

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=27.5303643724696, Blast_Score=128, Evalue=6e-30,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=70.0404858299595, Blast_Score=359, Evalue=1e-100,
Organism=Escherichia coli, GI1788294, Length=238, Percent_Identity=40.3361344537815, Blast_Score=168, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=32.5757575757576, Blast_Score=130, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24583305, Length=256, Percent_Identity=30.46875, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26781; Mature: 26650

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSAREGGSDPDSNPRLRIAIDKALGGN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
MTRDTIERAIKRGAGELEGQQLETIIYEGYGPGGTAVMVETMTDNRNRTVSGVRNAFSKS
CCHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC
GGNLGTDGSVAYLFTKRGVLSYAPGTDEDALMDAALEAGAEDVVSYDDGAIDVFTEPTEF
CCCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHCCHHHHHCCCCCCEEEEECCHHH
YGVKDALDAAGFVSDNAEIAMIASTKAELDAETAEKFMRLIDTLEEHDDVQEVYHNAEIS
HCHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DEIMESLG
HHHHHHCC
>Mature Secondary Structure 
AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSAREGGSDPDSNPRLRIAIDKALGGN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
MTRDTIERAIKRGAGELEGQQLETIIYEGYGPGGTAVMVETMTDNRNRTVSGVRNAFSKS
CCHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC
GGNLGTDGSVAYLFTKRGVLSYAPGTDEDALMDAALEAGAEDVVSYDDGAIDVFTEPTEF
CCCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHCCHHHHHCCCCCCEEEEECCHHH
YGVKDALDAAGFVSDNAEIAMIASTKAELDAETAEKFMRLIDTLEEHDDVQEVYHNAEIS
HCHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DEIMESLG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]