| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is hisH [H]
Identifier: 117920295
GI number: 117920295
Start: 2191578
End: 2192228
Strand: Reverse
Name: hisH [H]
Synonym: Shewana3_1850
Alternate gene names: 117920295
Gene position: 2192228-2191578 (Counterclockwise)
Preceding gene: 117920296
Following gene: 117920294
Centisome position: 44.09
GC content: 51.31
Gene sequence:
>651_bases ATGTCAGCAAACATAGATGAATTTGATGTTGTCATCATAGACACAGGTTGCGCCAACTTAAGCTCGGTCCGTTTCGCCTT TGAGCGCCTCGGCGCTAAGGTGTTAGTCACCGATGACAAGGCCAGCATTAAAGCCGCCAAACGTGTGGTACTGCCAGGTG TCGGCAGCGCTGGCGCCGCGATGGCTTCGTTAACGGAAAAAGCCTTAGTCGAATTAATCCAAGGGTTAACTCAACCCGTG CTGGGCGTCTGTTTAGGGATGCAAATGCTCACCCTGCTCTCTAAAGAACGCGGCGGCCAAGCGTTAGATTGCCAATGCTT AGGCATTATTCCAACCGAGATTGACGAGCTAGACCGTCAAATACTGAAGGCCGAAGGTTTACCTCTGCCGCACATGGGCT GGAACCAACTGACCTTTAGCAATCCGTCTCAGGTTCACCCGCTGTTTACCGGTGTTCCAGCTGGCAGTTATGTGTATTTT GTGCACAGCTACCGCGCGCCATTAAGCGACTACACCTTGGCACAATGCCGTTATGGTGAAGACTTTAGCGCCGCCATCGG TAAAGACAACTTTATGGGCGTGCAATTTCACCCCGAAAAGAGCGCCGCCGTGGGTGCGCAAATCCTAGGTAACTTTTTAA AAATGCAGTAA
Upstream 100 bases:
>100_bases TGATTAGCGAATAATACAAAGCCTGATGATTTTAACGAGGGCAGTTCCGGAATGCGGCGACAAGCCACTTCCCCCACTGA CCCATCAATAGGAAAACCCA
Downstream 100 bases:
>100_bases ATGCACCAAAAAGAATTTAAGGACAACAGATGATCATTCCAGCAATTGATTTAATTGATGGCCAGATAGTTAGGCTCTAC CAAGGGGATTATGGGCAGCA
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSANIDEFDVVIIDTGCANLSSVRFAFERLGAKVLVTDDKASIKAAKRVVLPGVGSAGAAMASLTEKALVELIQGLTQPV LGVCLGMQMLTLLSKERGGQALDCQCLGIIPTEIDELDRQILKAEGLPLPHMGWNQLTFSNPSQVHPLFTGVPAGSYVYF VHSYRAPLSDYTLAQCRYGEDFSAAIGKDNFMGVQFHPEKSAAVGAQILGNFLKMQ
Sequences:
>Translated_216_residues MSANIDEFDVVIIDTGCANLSSVRFAFERLGAKVLVTDDKASIKAAKRVVLPGVGSAGAAMASLTEKALVELIQGLTQPV LGVCLGMQMLTLLSKERGGQALDCQCLGIIPTEIDELDRQILKAEGLPLPHMGWNQLTFSNPSQVHPLFTGVPAGSYVYF VHSYRAPLSDYTLAQCRYGEDFSAAIGKDNFMGVQFHPEKSAAVGAQILGNFLKMQ >Mature_215_residues SANIDEFDVVIIDTGCANLSSVRFAFERLGAKVLVTDDKASIKAAKRVVLPGVGSAGAAMASLTEKALVELIQGLTQPVL GVCLGMQMLTLLSKERGGQALDCQCLGIIPTEIDELDRQILKAEGLPLPHMGWNQLTFSNPSQVHPLFTGVPAGSYVYFV HSYRAPLSDYTLAQCRYGEDFSAAIGKDNFMGVQFHPEKSAAVGAQILGNFLKMQ
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=207, Percent_Identity=50.2415458937198, Blast_Score=201, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6319725, Length=224, Percent_Identity=34.375, Blast_Score=102, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 23193; Mature: 23062
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANIDEFDVVIIDTGCANLSSVRFAFERLGAKVLVTDDKASIKAAKRVVLPGVGSAGAA CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHEEECCCCCCHHHH MASLTEKALVELIQGLTQPVLGVCLGMQMLTLLSKERGGQALDCQCLGIIPTEIDELDRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEECCCHHHHHHHHH ILKAEGLPLPHMGWNQLTFSNPSQVHPLFTGVPAGSYVYFVHSYRAPLSDYTLAQCRYGE HHHHCCCCCCCCCCCCEECCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCHHHHHCCCC DFSAAIGKDNFMGVQFHPEKSAAVGAQILGNFLKMQ CHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SANIDEFDVVIIDTGCANLSSVRFAFERLGAKVLVTDDKASIKAAKRVVLPGVGSAGAA CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHEEECCCCCCHHHH MASLTEKALVELIQGLTQPVLGVCLGMQMLTLLSKERGGQALDCQCLGIIPTEIDELDRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEECCCHHHHHHHHH ILKAEGLPLPHMGWNQLTFSNPSQVHPLFTGVPAGSYVYFVHSYRAPLSDYTLAQCRYGE HHHHCCCCCCCCCCCCEECCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCHHHHHCCCC DFSAAIGKDNFMGVQFHPEKSAAVGAQILGNFLKMQ CHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]