Click here to switch to the map view.

The map label for this gene is 117920261

Identifier: 117920261

GI number: 117920261

Start: 2141332

End: 2141865

Strand: Direct

Name: 117920261

Synonym: Shewana3_1814

Alternate gene names: NA

Gene position: 2141332-2141865 (Clockwise)

Preceding gene: 117920260

Following gene: 117920262

Centisome position: 43.07

GC content: 38.2

Gene sequence:

>534_bases
GTGACAAAAGCTAAAGATAATTTTGAAAAGGCAATTCAAGATGCTGAATGGATTTTAGAAGCCTATGACCATTTAAACAA
AATTGAAGGTAGGGAAAGAGAACCTGAGGAGTTTAAGCGGGCTGCATTGATCATGACCTTAACTGCTTGGGAAACCTATG
TCGAAGATGTCATTGAGGAAAAGTTGACAGCAGATTTGAGAACCCTGGCTGGCTCGAATGTTGGAAAATTTATTACATCG
ACACTTAAAACTGAGCTTAAGTATTTTCATACCCCAAATTCTCAGAAAACCAAGGGAATGTTTGAGCGGTTTTTATACGT
AGATGTGACCGAGAAATGGACCTGGATTGATGGTGATATTGAGCAAGTTCAATCCAAACTAAACCAATGGATAAGAAAAC
GAGGTGAAGCAGTTCATCGGTCTATTAATGACAAACAAGCCACTCATTTAGTAAGCCGGCCAGATATGAAAAAATGCCTG
ACGTTTTTTAAAAAGCTCGTAGAAACAACAGATTTAGCTATTGAGTCAGTGTAA

Upstream 100 bases:

>100_bases
TCGAGTTTGTCGCCGATGGACAAGATCTGTGACCCGTTGCATCAGTTTTCAAGTTGGTTAGACCTGCAAAATAACGTATA
TCAGTGATAAGGGAGCACGT

Downstream 100 bases:

>100_bases
AATGAATAACTGTAATCGAGCATGAAAAGGTAAAACCGTAATGAATCTAATTGCCAATTAATCAGTGAGAAACTAGTTAC
ATTATTGGTTGTAGAAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTKAKDNFEKAIQDAEWILEAYDHLNKIEGREREPEEFKRAALIMTLTAWETYVEDVIEEKLTADLRTLAGSNVGKFITS
TLKTELKYFHTPNSQKTKGMFERFLYVDVTEKWTWIDGDIEQVQSKLNQWIRKRGEAVHRSINDKQATHLVSRPDMKKCL
TFFKKLVETTDLAIESV

Sequences:

>Translated_177_residues
MTKAKDNFEKAIQDAEWILEAYDHLNKIEGREREPEEFKRAALIMTLTAWETYVEDVIEEKLTADLRTLAGSNVGKFITS
TLKTELKYFHTPNSQKTKGMFERFLYVDVTEKWTWIDGDIEQVQSKLNQWIRKRGEAVHRSINDKQATHLVSRPDMKKCL
TFFKKLVETTDLAIESV
>Mature_176_residues
TKAKDNFEKAIQDAEWILEAYDHLNKIEGREREPEEFKRAALIMTLTAWETYVEDVIEEKLTADLRTLAGSNVGKFITST
LKTELKYFHTPNSQKTKGMFERFLYVDVTEKWTWIDGDIEQVQSKLNQWIRKRGEAVHRSINDKQATHLVSRPDMKKCLT
FFKKLVETTDLAIESV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20718; Mature: 20587

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAKDNFEKAIQDAEWILEAYDHLNKIEGREREPEEFKRAALIMTLTAWETYVEDVIEE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLTADLRTLAGSNVGKFITSTLKTELKYFHTPNSQKTKGMFERFLYVDVTEKWTWIDGDI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCEEECCCCH
EQVQSKLNQWIRKRGEAVHRSINDKQATHLVSRPDMKKCLTFFKKLVETTDLAIESV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKAKDNFEKAIQDAEWILEAYDHLNKIEGREREPEEFKRAALIMTLTAWETYVEDVIEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLTADLRTLAGSNVGKFITSTLKTELKYFHTPNSQKTKGMFERFLYVDVTEKWTWIDGDI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCEEECCCCH
EQVQSKLNQWIRKRGEAVHRSINDKQATHLVSRPDMKKCLTFFKKLVETTDLAIESV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA