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The map label for this gene is viaA [H]

Identifier: 117920260

GI number: 117920260

Start: 2139735

End: 2141318

Strand: Direct

Name: viaA [H]

Synonym: Shewana3_1813

Alternate gene names: 117920260

Gene position: 2139735-2141318 (Clockwise)

Preceding gene: 117920259

Following gene: 117920261

Centisome position: 43.03

GC content: 43.75

Gene sequence:

>1584_bases
GTGAATGAACAAAAACCAACACAGCTGGCTCCAGCACTTAATATTTTAGCTGGTTTGGAGCGGCAGTTAGTTGATATTGA
TTTATTACCTGATTCGTTGGTGCCAGCTGTAGCTACCCTACCAGGAGGCGATTTATCTACTCGCTGTATGACTATCGCAT
TATTGCGAAATCAGTTGTTGGCGGGAGAGTCATTGTCACAACCTTGTCCTTGGTTACCTGAGGCTGTTCAGCAAAACATT
GTTAATGTAATTAGCCGTTCAGGTATTGCAACTTATTGTCAAAATAATCCGCAAGTCACCGATGCCTTGATATTGGATTT
ACTATCTGCTCTTGAAGGTGCTCAGACAAGAGCATTAATCCTTGCTAGGCAATTAGCTCAAATCAAATATAAGCAGGCGT
TAGAAGTGCTGAAAGAGGAATTCGCCGTTGCCCATATCAAACGCAATTCAGCCAAACTTAAAAATTTACTTGTTCTTTCA
GATGCAAAAAAACTTGAATGTCAGCTCCAGGCTGAATTAGAGGCCTGGTTGCAGTTAATTAATGCTAATGGACAACATCC
ATTTGCATTGCCATCAGTTTGGGCCGAAAGGTTGGAAGTCTGGCAAATACTTTCAGAGATTTTTGATGATTTAGGTATGG
TCACTGGTCTTGGTTGGGACCTATTGAAAGGAATGCTGCAAAGCCATGGTTGGATGAACATGGTGCGATTACAGAAGCTG
GTCGAGCAAATCCCACAATTGCGTGAAGTGATTGAAACCCTGGGGCGCATGAAAGATTGCGACGGTGAGCCCGTGATTGA
AGAAATTATCTCTAAGATGAGCGTAACGAAAAGGCGCGATAAAGAGATTTCTATGCCGCTTGTGCCAATGGAAACCAAAG
GGATTACTCGTTCTGACTCAATCAGTCGAATGTTGCCTCAAGAAGCGGCTTTTTTGGGGCATCCAGTCCTTAAAAAACTT
TGGCATGCCCGGCGAGCTGAGCATGCATTGCTCAGTTATGCTGTTGAAGGCACGGACGTCATCACTGAAGAGGTTACATT
TGAGCAAGAGGTTAAGGAAGAAAAATCCGGCTTCAAAATAAATCGTAACCGTGGTCCCATGATTGTTTGTCTAGATACTT
CCGGTTCCATGCAAGGAACACCAGAGAATGTTGCCAAGGCGCTGGTGTTGCAATGTATCAGTGTGGCTAAAACCGAAAAA
CGTGCTTGTTATGTTTACCTATTTGGTAGCTGGGGAGAAGTGACAGAAATGGAGCTGACACCCGATGCTGAGGGCTTAGA
GCGGATGATACTTTTTCTGTCCATGTCATTCGGCGGTGGTACAGATGCAGAGGGGCCACTTAATTTGGCTCTTGAGCAAA
GTGATAAGAATAAATGGCATCAAGCAGATATATTGCTCGTTAGCGATGGTAAGTTTGCGGTGTCTTCAGGACTAACCCGT
AAAATTAGTCATCGTAAGGATAATAGCGGATTGAGTATTCATGGGATTGTTATTGGGTCGAGTTTGTCGCCGATGGACAA
GATCTGTGACCCGTTGCATCAGTTTTCAAGTTGGTTAGACCTGCAAAATAACGTATATCAGTGA

Upstream 100 bases:

>100_bases
GTAAAAGTGAAACAAGGTTTTGAAGCCTTGCCACGGGAACAAGAAGTTGATTTGTCGGACACTAGCATTCCAGTTGATGC
AGTGTTAGAGGGTGAACTCT

Downstream 100 bases:

>100_bases
TAAGGGAGCACGTGTGACAAAAGCTAAAGATAATTTTGAAAAGGCAATTCAAGATGCTGAATGGATTTTAGAAGCCTATG
ACCATTTAAACAAAATTGAA

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: VWA domain protein interacting with AAA ATPase [H]

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MNEQKPTQLAPALNILAGLERQLVDIDLLPDSLVPAVATLPGGDLSTRCMTIALLRNQLLAGESLSQPCPWLPEAVQQNI
VNVISRSGIATYCQNNPQVTDALILDLLSALEGAQTRALILARQLAQIKYKQALEVLKEEFAVAHIKRNSAKLKNLLVLS
DAKKLECQLQAELEAWLQLINANGQHPFALPSVWAERLEVWQILSEIFDDLGMVTGLGWDLLKGMLQSHGWMNMVRLQKL
VEQIPQLREVIETLGRMKDCDGEPVIEEIISKMSVTKRRDKEISMPLVPMETKGITRSDSISRMLPQEAAFLGHPVLKKL
WHARRAEHALLSYAVEGTDVITEEVTFEQEVKEEKSGFKINRNRGPMIVCLDTSGSMQGTPENVAKALVLQCISVAKTEK
RACYVYLFGSWGEVTEMELTPDAEGLERMILFLSMSFGGGTDAEGPLNLALEQSDKNKWHQADILLVSDGKFAVSSGLTR
KISHRKDNSGLSIHGIVIGSSLSPMDKICDPLHQFSSWLDLQNNVYQ

Sequences:

>Translated_527_residues
MNEQKPTQLAPALNILAGLERQLVDIDLLPDSLVPAVATLPGGDLSTRCMTIALLRNQLLAGESLSQPCPWLPEAVQQNI
VNVISRSGIATYCQNNPQVTDALILDLLSALEGAQTRALILARQLAQIKYKQALEVLKEEFAVAHIKRNSAKLKNLLVLS
DAKKLECQLQAELEAWLQLINANGQHPFALPSVWAERLEVWQILSEIFDDLGMVTGLGWDLLKGMLQSHGWMNMVRLQKL
VEQIPQLREVIETLGRMKDCDGEPVIEEIISKMSVTKRRDKEISMPLVPMETKGITRSDSISRMLPQEAAFLGHPVLKKL
WHARRAEHALLSYAVEGTDVITEEVTFEQEVKEEKSGFKINRNRGPMIVCLDTSGSMQGTPENVAKALVLQCISVAKTEK
RACYVYLFGSWGEVTEMELTPDAEGLERMILFLSMSFGGGTDAEGPLNLALEQSDKNKWHQADILLVSDGKFAVSSGLTR
KISHRKDNSGLSIHGIVIGSSLSPMDKICDPLHQFSSWLDLQNNVYQ
>Mature_527_residues
MNEQKPTQLAPALNILAGLERQLVDIDLLPDSLVPAVATLPGGDLSTRCMTIALLRNQLLAGESLSQPCPWLPEAVQQNI
VNVISRSGIATYCQNNPQVTDALILDLLSALEGAQTRALILARQLAQIKYKQALEVLKEEFAVAHIKRNSAKLKNLLVLS
DAKKLECQLQAELEAWLQLINANGQHPFALPSVWAERLEVWQILSEIFDDLGMVTGLGWDLLKGMLQSHGWMNMVRLQKL
VEQIPQLREVIETLGRMKDCDGEPVIEEIISKMSVTKRRDKEISMPLVPMETKGITRSDSISRMLPQEAAFLGHPVLKKL
WHARRAEHALLSYAVEGTDVITEEVTFEQEVKEEKSGFKINRNRGPMIVCLDTSGSMQGTPENVAKALVLQCISVAKTEK
RACYVYLFGSWGEVTEMELTPDAEGLERMILFLSMSFGGGTDAEGPLNLALEQSDKNKWHQADILLVSDGKFAVSSGLTR
KISHRKDNSGLSIHGIVIGSSLSPMDKICDPLHQFSSWLDLQNNVYQ

Specific function: Unknown

COG id: COG2425

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the viaA family [H]

Homologues:

Organism=Escherichia coli, GI48994959, Length=311, Percent_Identity=30.2250803858521, Blast_Score=131, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008912
- InterPro:   IPR002035 [H]

Pfam domain/function: PF05762 VWA_CoxE [H]

EC number: NA

Molecular weight: Translated: 58487; Mature: 58487

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQKPTQLAPALNILAGLERQLVDIDLLPDSLVPAVATLPGGDLSTRCMTIALLRNQLL
CCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AGESLSQPCPWLPEAVQQNIVNVISRSGIATYCQNNPQVTDALILDLLSALEGAQTRALI
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHH
LARQLAQIKYKQALEVLKEEFAVAHIKRNSAKLKNLLVLSDAKKLECQLQAELEAWLQLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHH
NANGQHPFALPSVWAERLEVWQILSEIFDDLGMVTGLGWDLLKGMLQSHGWMNMVRLQKL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
VEQIPQLREVIETLGRMKDCDGEPVIEEIISKMSVTKRRDKEISMPLVPMETKGITRSDS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
ISRMLPQEAAFLGHPVLKKLWHARRAEHALLSYAVEGTDVITEEVTFEQEVKEEKSGFKI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEE
NRNRGPMIVCLDTSGSMQGTPENVAKALVLQCISVAKTEKRACYVYLFGSWGEVTEMELT
ECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEC
PDAEGLERMILFLSMSFGGGTDAEGPLNLALEQSDKNKWHQADILLVSDGKFAVSSGLTR
CCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHCCCHH
KISHRKDNSGLSIHGIVIGSSLSPMDKICDPLHQFSSWLDLQNNVYQ
HHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNEQKPTQLAPALNILAGLERQLVDIDLLPDSLVPAVATLPGGDLSTRCMTIALLRNQLL
CCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AGESLSQPCPWLPEAVQQNIVNVISRSGIATYCQNNPQVTDALILDLLSALEGAQTRALI
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHH
LARQLAQIKYKQALEVLKEEFAVAHIKRNSAKLKNLLVLSDAKKLECQLQAELEAWLQLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHH
NANGQHPFALPSVWAERLEVWQILSEIFDDLGMVTGLGWDLLKGMLQSHGWMNMVRLQKL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
VEQIPQLREVIETLGRMKDCDGEPVIEEIISKMSVTKRRDKEISMPLVPMETKGITRSDS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
ISRMLPQEAAFLGHPVLKKLWHARRAEHALLSYAVEGTDVITEEVTFEQEVKEEKSGFKI
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEE
NRNRGPMIVCLDTSGSMQGTPENVAKALVLQCISVAKTEKRACYVYLFGSWGEVTEMELT
ECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEC
PDAEGLERMILFLSMSFGGGTDAEGPLNLALEQSDKNKWHQADILLVSDGKFAVSSGLTR
CCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHCCCHH
KISHRKDNSGLSIHGIVIGSSLSPMDKICDPLHQFSSWLDLQNNVYQ
HHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA