| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117920262
Identifier: 117920262
GI number: 117920262
Start: 2142170
End: 2142850
Strand: Direct
Name: 117920262
Synonym: Shewana3_1815
Alternate gene names: NA
Gene position: 2142170-2142850 (Clockwise)
Preceding gene: 117920261
Following gene: 117920263
Centisome position: 43.08
GC content: 42.73
Gene sequence:
>681_bases ATGAAAAAAAAGAATGCAATTCTAATTTTGGAAGCTCCATGGGAGTTGTCTGAGTCAGACCAAAATACGGTCAGTGTTTT ACCCTTTTTTCAAGGGTTAGAGCGATTGAGAGGGAGTTTTGATCTGTTCCACTCCCACTTCTATGAAGCCAAAAGCTTTA AAATGGCGCTTGATAACCTCACTAGAGTGCAATACGAACGCTGTTATGTGTATATCGCATGTCATGGTGATGGTAAGCGC CTACATCACATCAATTTGGCTAACGCGTTAAAGATTATCCAAACTAAAGCTAAACAAAATAATATCTTAGGTGTGGTCAT CGGTTCGTGTTTAGTGGGCAATAACACTGACATCATGGGCGAATCAATGACAAATTCTCCCATTGTTTGGAAGTTTGGTT ACCGTTGTGAAGTCAATTGGCTGGACGGCACCCTCATGGATCTTGAGGTCTTTGATGCCTTGTTAAAGGCGCGAGAGCCT GATTTCTCAGATGAAAACGCGCTACTGCGCCGTTTCCAATCCGCATTTAGACACTATGCCCCTCATGCAATTATTGGTAA TCACCCTAATGGTGAAGGTTGCTCAATTGCTGACGGCATTTCTTTGGTGATCCAAGCCAGAGGGCAAGGTCATGTACCAA TGGATTACAGCGAATGCCTATTTAATGATGATTGCGAGTAA
Upstream 100 bases:
>100_bases TATTCAATACACTGATTTTATTGTTAAATGTTTTTATAGTCAGCCATACAGTGAATTGTGGTCTATTTAGGGCCAATAGA AGTTAGGATATCAAAGGGAA
Downstream 100 bases:
>100_bases TTTGTGCGAATATTTGTGAATAAGAGCAACCTGTTACAACGAACTACGATACCATATGTCATCGTTTCTGTGTTCGCTGA AAAAGAGTAGTAATTAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGSFDLFHSHFYEAKSFKMALDNLTRVQYERCYVYIACHGDGKR LHHINLANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMGESMTNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREP DFSDENALLRRFQSAFRHYAPHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFNDDCE
Sequences:
>Translated_226_residues MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGSFDLFHSHFYEAKSFKMALDNLTRVQYERCYVYIACHGDGKR LHHINLANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMGESMTNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREP DFSDENALLRRFQSAFRHYAPHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFNDDCE >Mature_226_residues MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGSFDLFHSHFYEAKSFKMALDNLTRVQYERCYVYIACHGDGKR LHHINLANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMGESMTNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREP DFSDENALLRRFQSAFRHYAPHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFNDDCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25557; Mature: 25557
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGSFDLFHSHFYEAKSFKMALDNL CCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TRVQYERCYVYIACHGDGKRLHHINLANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMG HHEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCC ESMTNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREPDFSDENALLRRFQSAFRHYA CCCCCCCEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC PHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFNDDCE CCEEECCCCCCCCCCHHCCEEEEEEECCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGSFDLFHSHFYEAKSFKMALDNL CCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TRVQYERCYVYIACHGDGKRLHHINLANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMG HHEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCC ESMTNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREPDFSDENALLRRFQSAFRHYA CCCCCCCEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC PHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFNDDCE CCEEECCCCCCCCCCHHCCEEEEEEECCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA