Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117920262

Identifier: 117920262

GI number: 117920262

Start: 2142170

End: 2142850

Strand: Direct

Name: 117920262

Synonym: Shewana3_1815

Alternate gene names: NA

Gene position: 2142170-2142850 (Clockwise)

Preceding gene: 117920261

Following gene: 117920263

Centisome position: 43.08

GC content: 42.73

Gene sequence:

>681_bases
ATGAAAAAAAAGAATGCAATTCTAATTTTGGAAGCTCCATGGGAGTTGTCTGAGTCAGACCAAAATACGGTCAGTGTTTT
ACCCTTTTTTCAAGGGTTAGAGCGATTGAGAGGGAGTTTTGATCTGTTCCACTCCCACTTCTATGAAGCCAAAAGCTTTA
AAATGGCGCTTGATAACCTCACTAGAGTGCAATACGAACGCTGTTATGTGTATATCGCATGTCATGGTGATGGTAAGCGC
CTACATCACATCAATTTGGCTAACGCGTTAAAGATTATCCAAACTAAAGCTAAACAAAATAATATCTTAGGTGTGGTCAT
CGGTTCGTGTTTAGTGGGCAATAACACTGACATCATGGGCGAATCAATGACAAATTCTCCCATTGTTTGGAAGTTTGGTT
ACCGTTGTGAAGTCAATTGGCTGGACGGCACCCTCATGGATCTTGAGGTCTTTGATGCCTTGTTAAAGGCGCGAGAGCCT
GATTTCTCAGATGAAAACGCGCTACTGCGCCGTTTCCAATCCGCATTTAGACACTATGCCCCTCATGCAATTATTGGTAA
TCACCCTAATGGTGAAGGTTGCTCAATTGCTGACGGCATTTCTTTGGTGATCCAAGCCAGAGGGCAAGGTCATGTACCAA
TGGATTACAGCGAATGCCTATTTAATGATGATTGCGAGTAA

Upstream 100 bases:

>100_bases
TATTCAATACACTGATTTTATTGTTAAATGTTTTTATAGTCAGCCATACAGTGAATTGTGGTCTATTTAGGGCCAATAGA
AGTTAGGATATCAAAGGGAA

Downstream 100 bases:

>100_bases
TTTGTGCGAATATTTGTGAATAAGAGCAACCTGTTACAACGAACTACGATACCATATGTCATCGTTTCTGTGTTCGCTGA
AAAAGAGTAGTAATTAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGSFDLFHSHFYEAKSFKMALDNLTRVQYERCYVYIACHGDGKR
LHHINLANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMGESMTNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREP
DFSDENALLRRFQSAFRHYAPHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFNDDCE

Sequences:

>Translated_226_residues
MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGSFDLFHSHFYEAKSFKMALDNLTRVQYERCYVYIACHGDGKR
LHHINLANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMGESMTNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREP
DFSDENALLRRFQSAFRHYAPHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFNDDCE
>Mature_226_residues
MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGSFDLFHSHFYEAKSFKMALDNLTRVQYERCYVYIACHGDGKR
LHHINLANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMGESMTNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREP
DFSDENALLRRFQSAFRHYAPHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFNDDCE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25557; Mature: 25557

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGSFDLFHSHFYEAKSFKMALDNL
CCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TRVQYERCYVYIACHGDGKRLHHINLANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMG
HHEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCC
ESMTNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREPDFSDENALLRRFQSAFRHYA
CCCCCCCEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFNDDCE
CCEEECCCCCCCCCCHHCCEEEEEEECCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MKKKNAILILEAPWELSESDQNTVSVLPFFQGLERLRGSFDLFHSHFYEAKSFKMALDNL
CCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TRVQYERCYVYIACHGDGKRLHHINLANALKIIQTKAKQNNILGVVIGSCLVGNNTDIMG
HHEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCC
ESMTNSPIVWKFGYRCEVNWLDGTLMDLEVFDALLKAREPDFSDENALLRRFQSAFRHYA
CCCCCCCEEEEECCEEEEEECCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PHAIIGNHPNGEGCSIADGISLVIQARGQGHVPMDYSECLFNDDCE
CCEEECCCCCCCCCCHHCCEEEEEEECCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA