| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920256
Identifier: 117920256
GI number: 117920256
Start: 2134712
End: 2135677
Strand: Direct
Name: 117920256
Synonym: Shewana3_1809
Alternate gene names: NA
Gene position: 2134712-2135677 (Clockwise)
Preceding gene: 117920255
Following gene: 117920258
Centisome position: 42.93
GC content: 36.96
Gene sequence:
>966_bases ATGATAAGTAATACAATTAGAACAATAATGGTACCAGATTGGGACAAGGTTGATCCGGAAATCATTGAGCTAATTAAGTC AGGTCACATGCGGTTGCGCGAGGGTATTGTTTACTGGTCAAAAGGCAAGAAATTAATTGATGGTGCAGGGAGTATTGTTA AACATTTACCATTCAAGGAGATGACCGTAGATCTTAGTGAGGGAGTTAACGTAGTAGAGCTCGCAAAAGCAAGCGCTGCA GTTAAGCAAAGTATCTTTTTTGCCGCTGGCTTATCGACAGGAATCATTCTTGGTGCGATTGTTATCCAAACAGTATATTT ATCGAAGAAACTGGAAAAAATCCAAGCATCCATCGACAAGATAGCCATCGAAATTCAAACACAAAATCAATTGTTTTATC TTGAAAAACTTTCGTCTTATATTGGTAGTGTAATGGCTGCACATGAGTTGCTAGGTATTTATCAAGAACATGATCCTATA CCTGAGATTGTTGGTCCTTTGTTGGTTACTTTGGCTCAACAACGTAATGAGCTTTGTACCTTTTTGATGAAATTGATCGG GTGGATCGAGCAGCGGAATAATCGAGATGGTAAAAATACTATTACCCAAGAACACGCAGCTTTAATAATTGATTTTATCA CTCATGTTTTAGATATGATGCCCAAAGCTATTTATATTGAGTCAACTCTTTACACTAGATTAGGTCATTACCATCATGCG GATACCTTAGTAGAAACTGCTGGAGCTAAATATACCATGGTGCTCCAAGCTTATCGTGGTTGGGCTAGAGATTCTTACGA CAATTTATTGACTGGTTCATCATCTAGCCACAATAATCGATTATTAACTAATAAGTTTAATGACATAAAAAGCTTACTTA ACTCATTGGAAAACAAGATTTTGCTTGGTAAAAATGAGCAATTGAATCAGCAAGATGAGAAGCTGGTTATTGCTTTACCA GTGTAA
Upstream 100 bases:
>100_bases TTAACGTTACTTTACCCTGTGTTATTCATATTGCAATGCTCCGAGAACTGCGACGTAACGATAATCCATTCAAATAAGAT CTGCTAAACAAGGAGTTGTA
Downstream 100 bases:
>100_bases GTCAATCGTAAAGTGGCATAATTATGAAGATATAGTACAAGTCATTTCTATTGTTCTTACTGAGTTTAAGATGTTATTCC AAGTACCATATTCACTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MISNTIRTIMVPDWDKVDPEIIELIKSGHMRLREGIVYWSKGKKLIDGAGSIVKHLPFKEMTVDLSEGVNVVELAKASAA VKQSIFFAAGLSTGIILGAIVIQTVYLSKKLEKIQASIDKIAIEIQTQNQLFYLEKLSSYIGSVMAAHELLGIYQEHDPI PEIVGPLLVTLAQQRNELCTFLMKLIGWIEQRNNRDGKNTITQEHAALIIDFITHVLDMMPKAIYIESTLYTRLGHYHHA DTLVETAGAKYTMVLQAYRGWARDSYDNLLTGSSSSHNNRLLTNKFNDIKSLLNSLENKILLGKNEQLNQQDEKLVIALP V
Sequences:
>Translated_321_residues MISNTIRTIMVPDWDKVDPEIIELIKSGHMRLREGIVYWSKGKKLIDGAGSIVKHLPFKEMTVDLSEGVNVVELAKASAA VKQSIFFAAGLSTGIILGAIVIQTVYLSKKLEKIQASIDKIAIEIQTQNQLFYLEKLSSYIGSVMAAHELLGIYQEHDPI PEIVGPLLVTLAQQRNELCTFLMKLIGWIEQRNNRDGKNTITQEHAALIIDFITHVLDMMPKAIYIESTLYTRLGHYHHA DTLVETAGAKYTMVLQAYRGWARDSYDNLLTGSSSSHNNRLLTNKFNDIKSLLNSLENKILLGKNEQLNQQDEKLVIALP V >Mature_321_residues MISNTIRTIMVPDWDKVDPEIIELIKSGHMRLREGIVYWSKGKKLIDGAGSIVKHLPFKEMTVDLSEGVNVVELAKASAA VKQSIFFAAGLSTGIILGAIVIQTVYLSKKLEKIQASIDKIAIEIQTQNQLFYLEKLSSYIGSVMAAHELLGIYQEHDPI PEIVGPLLVTLAQQRNELCTFLMKLIGWIEQRNNRDGKNTITQEHAALIIDFITHVLDMMPKAIYIESTLYTRLGHYHHA DTLVETAGAKYTMVLQAYRGWARDSYDNLLTGSSSSHNNRLLTNKFNDIKSLLNSLENKILLGKNEQLNQQDEKLVIALP V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36027; Mature: 36027
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISNTIRTIMVPDWDKVDPEIIELIKSGHMRLREGIVYWSKGKKLIDGAGSIVKHLPFKE CCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHCEEEECCCCCHHHHHHHHHHHCCHHH MTVDLSEGVNVVELAKASAAVKQSIFFAAGLSTGIILGAIVIQTVYLSKKLEKIQASIDK HEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAIEIQTQNQLFYLEKLSSYIGSVMAAHELLGIYQEHDPIPEIVGPLLVTLAQQRNELCT EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH FLMKLIGWIEQRNNRDGKNTITQEHAALIIDFITHVLDMMPKAIYIESTLYTRLGHYHHA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCCHHHH DTLVETAGAKYTMVLQAYRGWARDSYDNLLTGSSSSHNNRLLTNKFNDIKSLLNSLENKI HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCE LLGKNEQLNQQDEKLVIALPV EECCCCCCCCCCCEEEEEECC >Mature Secondary Structure MISNTIRTIMVPDWDKVDPEIIELIKSGHMRLREGIVYWSKGKKLIDGAGSIVKHLPFKE CCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHCEEEECCCCCHHHHHHHHHHHCCHHH MTVDLSEGVNVVELAKASAAVKQSIFFAAGLSTGIILGAIVIQTVYLSKKLEKIQASIDK HEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAIEIQTQNQLFYLEKLSSYIGSVMAAHELLGIYQEHDPIPEIVGPLLVTLAQQRNELCT EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH FLMKLIGWIEQRNNRDGKNTITQEHAALIIDFITHVLDMMPKAIYIESTLYTRLGHYHHA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCCHHHH DTLVETAGAKYTMVLQAYRGWARDSYDNLLTGSSSSHNNRLLTNKFNDIKSLLNSLENKI HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCE LLGKNEQLNQQDEKLVIALPV EECCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA