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The map label for this gene is yaaW [H]

Identifier: 117920255

GI number: 117920255

Start: 2133981

End: 2134688

Strand: Direct

Name: yaaW [H]

Synonym: Shewana3_1808

Alternate gene names: 117920255

Gene position: 2133981-2134688 (Clockwise)

Preceding gene: 117920254

Following gene: 117920256

Centisome position: 42.92

GC content: 40.96

Gene sequence:

>708_bases
ATGGATTTTGTGAAGCGGAACTACATGTACCGGGAAGATGATGATTTACAGTTTCTTTCTCTTTGCACTCATAAGCAACT
GACACCACTTGTTAAATATTTGACTAAAGACAAAATTGGTAAACTTAGAACCACTGAGACACTAACGACTAACCCAAGGT
TTAAAAAGAATAAGCATGACTTGGCGCTAGTATGGCAAGAGATCTGCGCTGAATTGCAAACTTTTGGTAATTCAACAGTG
ATGAATCTTATTACCGGAAAGGGGGGAACCTATCTCAATTTACTGCAATATACTGCCCGTTCAATTGGCTGCTCGGTCAG
TGCTAAAGATAAAGATAGTGCTCTTGCAATTGAAAAAGCTATTGTCGCTAAGGTCATGAAATTGCAATTGGACAAGATGA
CGCAAGCTGATCGTTCGGCATTTGTCGAGAGAATGAGTAAAGATTATCAATGCAAGATTGATAATGCGCTTGACTGGAGC
AGCAAAGATTTCGCTATTGTATCTAGAGTCCTTGCTTCGGCATTTGGTGGTGCAGCGGTTGGTGCAGCACTTTTGCCAAG
AGTGCTGATGACATACAGTCCAATGGGTGTATTGGGTGGGATTTTTGGTGTATTTGCCGATGCCCCAAATGTTAACGTTA
CTTTACCCTGTGTTATTCATATTGCAATGCTCCGAGAACTGCGACGTAACGATAATCCATTCAAATAA

Upstream 100 bases:

>100_bases
TGCGAAAATTAAAGTTGAGCGTTTAGCGATTTGCCCTCTGAAAAAATTAGGTAGTGAAGAAGACGTCAGTATGCAAGCTG
TTTTATAAAAGGGAACTAAT

Downstream 100 bases:

>100_bases
GATCTGCTAAACAAGGAGTTGTAATGATAAGTAATACAATTAGAACAATAATGGTACCAGATTGGGACAAGGTTGATCCG
GAAATCATTGAGCTAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MDFVKRNYMYREDDDLQFLSLCTHKQLTPLVKYLTKDKIGKLRTTETLTTNPRFKKNKHDLALVWQEICAELQTFGNSTV
MNLITGKGGTYLNLLQYTARSIGCSVSAKDKDSALAIEKAIVAKVMKLQLDKMTQADRSAFVERMSKDYQCKIDNALDWS
SKDFAIVSRVLASAFGGAAVGAALLPRVLMTYSPMGVLGGIFGVFADAPNVNVTLPCVIHIAMLRELRRNDNPFK

Sequences:

>Translated_235_residues
MDFVKRNYMYREDDDLQFLSLCTHKQLTPLVKYLTKDKIGKLRTTETLTTNPRFKKNKHDLALVWQEICAELQTFGNSTV
MNLITGKGGTYLNLLQYTARSIGCSVSAKDKDSALAIEKAIVAKVMKLQLDKMTQADRSAFVERMSKDYQCKIDNALDWS
SKDFAIVSRVLASAFGGAAVGAALLPRVLMTYSPMGVLGGIFGVFADAPNVNVTLPCVIHIAMLRELRRNDNPFK
>Mature_235_residues
MDFVKRNYMYREDDDLQFLSLCTHKQLTPLVKYLTKDKIGKLRTTETLTTNPRFKKNKHDLALVWQEICAELQTFGNSTV
MNLITGKGGTYLNLLQYTARSIGCSVSAKDKDSALAIEKAIVAKVMKLQLDKMTQADRSAFVERMSKDYQCKIDNALDWS
SKDFAIVSRVLASAFGGAAVGAALLPRVLMTYSPMGVLGGIFGVFADAPNVNVTLPCVIHIAMLRELRRNDNPFK

Specific function: Unknown

COG id: COG4735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0174 family [H]

Homologues:

Organism=Escherichia coli, GI1786193, Length=242, Percent_Identity=24.7933884297521, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021150 [H]

Pfam domain/function: PF03981 Ubiq_cyt_C_chap [H]

EC number: NA

Molecular weight: Translated: 26225; Mature: 26225

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFVKRNYMYREDDDLQFLSLCTHKQLTPLVKYLTKDKIGKLRTTETLTTNPRFKKNKHD
CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHH
LALVWQEICAELQTFGNSTVMNLITGKGGTYLNLLQYTARSIGCSVSAKDKDSALAIEKA
HHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IVAKVMKLQLDKMTQADRSAFVERMSKDYQCKIDNALDWSSKDFAIVSRVLASAFGGAAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHH
GAALLPRVLMTYSPMGVLGGIFGVFADAPNVNVTLPCVIHIAMLRELRRNDNPFK
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDFVKRNYMYREDDDLQFLSLCTHKQLTPLVKYLTKDKIGKLRTTETLTTNPRFKKNKHD
CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHH
LALVWQEICAELQTFGNSTVMNLITGKGGTYLNLLQYTARSIGCSVSAKDKDSALAIEKA
HHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IVAKVMKLQLDKMTQADRSAFVERMSKDYQCKIDNALDWSSKDFAIVSRVLASAFGGAAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHH
GAALLPRVLMTYSPMGVLGGIFGVFADAPNVNVTLPCVIHIAMLRELRRNDNPFK
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]