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The map label for this gene is pqiA [H]

Identifier: 117920221

GI number: 117920221

Start: 2089915

End: 2090550

Strand: Reverse

Name: pqiA [H]

Synonym: Shewana3_1774

Alternate gene names: 117920221

Gene position: 2090550-2089915 (Counterclockwise)

Preceding gene: 117920235

Following gene: 117920220

Centisome position: 42.04

GC content: 48.58

Gene sequence:

>636_bases
ATGCATGAAAATACAGCAGAAAACTCTGTAATCCTCTGTCGTTCCTGCGACTTGGCCATTCGAAAGCGCGCCCTACCTAC
GGGTGTTAGGGCGTTGTGCCCGCGCTGCAGTACCGCACTTTATGACACACCATACTGCTCTGTAAACGGCATGTTGGCGC
TGTGCATTACCGCGCTGGTGTTCTATTTCCCCGCCAATTTTTTCCCTGTACTCGAAATCCACTTTTTGGGCAGTATTCGC
ACCACAACAGTGTTTCAGGGCGCCTTTGCGGTGTTCGACCAAGGTTATTGGGTCGTGGGACTAGCCGTGCTCGCCGCCGC
CGTGATTGGTCCGGGTTTATTGATCCTATCGATCCTCAGCCAGATTTTGATTGTCAAATGGGGACTTGGTAGCCCCTTTT
GGCGTCGCAGCCTCAAACAGTTATTAAAACTTCAAGGGCTGCTATCCCAGCTGACTATGCTGGAGATTTATGTGATTAGC
TTTCTGGTTTCTTCATTTCAATTATCTGATTTTTCTGATATTTACTTCGGAATGGGCACCTTTTGCTTCACTATGCTTTT
TTTAGTCACCCTGTTCTTACAGCGGGAATACGATATTGAGCATATGTGGAGTCTACTGATGCAGGGGCGCCGCTAA

Upstream 100 bases:

>100_bases
CGAGATGGGTCAAGCTGTTTGATGTCTCATTGGATAATCTGCTCGTTTACAGATTATTTGCGCAATCTCAATGGCTTTGG
GGCTAATTTAATATTTTTAT

Downstream 100 bases:

>100_bases
GATGAAACAACAGGGGAAAGATTTAGACCTGTGTCTGTGCCGAGTGTGCCGGCAGCTCAATAGCAGTGATAACACTCATT
GCAGCCGCTGTGAAGCCGAG

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MHENTAENSVILCRSCDLAIRKRALPTGVRALCPRCSTALYDTPYCSVNGMLALCITALVFYFPANFFPVLEIHFLGSIR
TTTVFQGAFAVFDQGYWVVGLAVLAAAVIGPGLLILSILSQILIVKWGLGSPFWRRSLKQLLKLQGLLSQLTMLEIYVIS
FLVSSFQLSDFSDIYFGMGTFCFTMLFLVTLFLQREYDIEHMWSLLMQGRR

Sequences:

>Translated_211_residues
MHENTAENSVILCRSCDLAIRKRALPTGVRALCPRCSTALYDTPYCSVNGMLALCITALVFYFPANFFPVLEIHFLGSIR
TTTVFQGAFAVFDQGYWVVGLAVLAAAVIGPGLLILSILSQILIVKWGLGSPFWRRSLKQLLKLQGLLSQLTMLEIYVIS
FLVSSFQLSDFSDIYFGMGTFCFTMLFLVTLFLQREYDIEHMWSLLMQGRR
>Mature_211_residues
MHENTAENSVILCRSCDLAIRKRALPTGVRALCPRCSTALYDTPYCSVNGMLALCITALVFYFPANFFPVLEIHFLGSIR
TTTVFQGAFAVFDQGYWVVGLAVLAAAVIGPGLLILSILSQILIVKWGLGSPFWRRSLKQLLKLQGLLSQLTMLEIYVIS
FLVSSFQLSDFSDIYFGMGTFCFTMLFLVTLFLQREYDIEHMWSLLMQGRR

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=175, Percent_Identity=25.7142857142857, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788137, Length=192, Percent_Identity=26.0416666666667, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 23764; Mature: 23764

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHENTAENSVILCRSCDLAIRKRALPTGVRALCPRCSTALYDTPYCSVNGMLALCITALV
CCCCCCCCCEEEEECCCHHHHHHCCCCCHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHH
FYFPANFFPVLEIHFLGSIRTTTVFQGAFAVFDQGYWVVGLAVLAAAVIGPGLLILSILS
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QILIVKWGLGSPFWRRSLKQLLKLQGLLSQLTMLEIYVISFLVSSFQLSDFSDIYFGMGT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FCFTMLFLVTLFLQREYDIEHMWSLLMQGRR
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MHENTAENSVILCRSCDLAIRKRALPTGVRALCPRCSTALYDTPYCSVNGMLALCITALV
CCCCCCCCCEEEEECCCHHHHHHCCCCCHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHH
FYFPANFFPVLEIHFLGSIRTTTVFQGAFAVFDQGYWVVGLAVLAAAVIGPGLLILSILS
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QILIVKWGLGSPFWRRSLKQLLKLQGLLSQLTMLEIYVISFLVSSFQLSDFSDIYFGMGT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FCFTMLFLVTLFLQREYDIEHMWSLLMQGRR
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]