| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is adhE [H]
Identifier: 117920235
GI number: 117920235
Start: 2112522
End: 2115122
Strand: Reverse
Name: adhE [H]
Synonym: Shewana3_1788
Alternate gene names: 117920235
Gene position: 2115122-2112522 (Counterclockwise)
Preceding gene: 117920243
Following gene: 117920221
Centisome position: 42.54
GC content: 51.25
Gene sequence:
>2601_bases ATGACAGTAACCAATGCTCAAGAACTGGATCTCATGGTCGAGCGCGTCGCCAAAGCGCAAGCCGAATATGCCAGTTTTAG CCAAGCCCAAGTCGATGCCATTTTCCGCGCCGCAGCTTTGGCCGCCGCCGATGCACGTATATCGCTCGCGAAAATGGCCG CAGCCGAAACCCGAATGGGGGTGATTGAAGACAAAGTGATTAAAAACCACTTTGCTTCCGAGTACATTTACAACAAGTAT AAAGATGAAAAGACCTGCGGGATTTTATCTGAGGACCCGACCTTCGGCACTATCACAATCGCCGAGCCAGTGGGCATTAT CTGTGGGATTGTTCCCACCACGAATCCCACCTCCACCGCCATCTTCAAAGCGTTGATAAGCCTTAAAACCCGCAATGCGA TTATTTTCTCCCCTCACCCAAGGGCAAAAGTCTCGACCACCACAGCGGCCAAACTGGTGCTAGATGCCGCCATTGCCGCC GGTGCGCCCAAGGACATTATCGGTTGGATTGATGAGCCCAGTGTGGCACTTTCCAACCAATTGATGACCCACCCTAAAGT GAACCTTATCCTCGCCACAGGTGGCCCAGGAATGGTGAAAGCCGCCTACTCCTCCGGCAAACCCGCCATTGGCGTGGGTG CGGGTAACACGCCAATTGTGATTGATGAAACCGCCGATATAAAACGCGCGGTCAGCTCGATTCTGATGTCTAAAACCTTC GATAACGGTGTTGTCTGTGCCTCAGAGCAAGCGGTGATTGTAGTCGATAGTATCTACGAACAAGTTAAAGAGCGCTTCGC GACCCACGGTGGTTATCTCTTAAATGCAGCGCAAACCGCTGCAATGCAACAAGTTATCCTTAAAAATGGCGGCTTAAATG CCGATATCGTCGGCCAAAGCGCCGCGACCATAGCGCAAATGGCGGGCATTGATGTCCCCTACACTACCAAGGTCTTGATT GGTGAAGTCACGGATATCACTGAGGCCGAAGCCTTTGCCCACGAAAAACTCTCTCCTTTACTTGGCATGTACCGCGCCGC CGATTTCAATGACGCCTTCGATAAAGCCGAAGCCTTAGTTGCCTTAGGCGGCATTGGCCACACATCCGGCTTATATACTG ACCAAGACACCCAAACCGAGCGGGTGAAAACCTTTGGTTTTAGAATGAAAACCGCGCGAATTCTAATCAATACTCCAGCA TCACAAGGCGGAATTGGCGATTTGTACAACTTTAAACTCGCTCCCTCGCTCACCTTAGGCTGCGGCTCTTGGGGCGGAAA CTCGATTTCTGAAAACGTCGGTCCAAGCCATTTAATCAATAAGAAAACCGTCGCTAAGAGGGCTGAAAATATGCTGTGGC ACAAGCTTCCTTCGTCTATCTACTTCCGCCGCGGCAGTTTACCCATCGCCCTTGAAGAATTGAGCGATAAAAGACGCGCC CTCGTAGTGACCGACAGATTCCTGTTTAACCAAGGTTATTGCGACGAAACCTTAAAGATTTTAAAAGCCCAGGGTCTTGA AACCGAAGTCTTTTACGAGGTGGAAGCCGATCCCACACTGGCCACAGTGCGCCAAGGTGCCAAAGTCGCCAATAGCTTTA AACCCGATGTGATTATCGCCTTAGGCGGTGGCTCGCCCATGGATGCGGCCAAGATTATTTGGGTGATGTACGAGCATCCC GATGTCGATTTTGCCGATTTAGCCCTGCGCTTTATGGATATCCGTAAACGTATCTATAAATTCCCTAAAATGGGCGTCAA AGCCACTATGGTGGCAATCCCCACCACATCCGGCACAGGCTCAGAGGTCACACCTTTTGCCGTGGTGACCGATGAACAAA CCGGTAAAAAGTACCCCATCGCCGACTATCAACTCACCCCAAACATGGCGATTGTTGACCCGAATCTGGTGATGGATATG CCGAAATCCTTAACCGCTTTCGGCGGAATTGATGCAATCACCCACGCACTCGAAGCCTATGTCAGCGTAATGGCGAATGA GTACAGCGATGGTCAAGCCCTGCAAGCACTTGACCTACTGTGCAAATATTTACCCGATGCTTATCAGCTTGGCGGCGCAT CCCCTATCGCCCGTGAAAAAGTGCACAATGGCGCGACTATAGCTGGTATCGCCTTTGCCAACGCCTTTCTTGGGATCTGT CACTCTATGGCCCATAAACTGGGCGCCGAGTTTCACTTAGCCCATGGGCTGGCCAATGCGCTACTCATTAGTAACGTGAT CCGCTTTAATGCGACCGACTTACCCACTAAGCAAGCCGCATTCAGCCAATACGACAGACCCAAAGCCCTCTGTCGCTACG CGGCCATTGCCGATCATTTAGCCTTAGATGGAAACTCAGATGCGGAAAAAGTCGAGAAATTGCTGGAAAAAATCGAGCAA CTCAAGAAGACGCTGGGCATTCCAGCATCTATCCAAGAAGCGGGAGTTAACGAAGCCGACTTCCTCGCCAAACTAGACGA GCTCGCCGAGGATGCCTTCGATGATCAATGTACTGGCGCCAACCCTCGCTACCCCTTGATTAGTGAGCTAAAACAGCTAC TGCTCGACAGCTACTATGGCCGCCCCTTCACCGAGCAATAG
Upstream 100 bases:
>100_bases TGAACGATCACACTTTCACTTAGGCTTTAGGTGTAATTTTTCATCATAAAGAAGATTTAGCGAATCGCGCATTCCCTAAA TCTTTTTAGGAGTTTTAATC
Downstream 100 bases:
>100_bases CACATTAAAATAGTACATAAAAATAGTGCATTAAGTAGTAAGTAAATTGACTGGGCTTTGTTTCCTTAGCGATATAGGCA AACAAAGCCCATTATTCACT
Product: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH; Pyruvate-formate-lyase deactivase; PFL deactivase [H]
Number of amino acids: Translated: 866; Mature: 865
Protein sequence:
>866_residues MTVTNAQELDLMVERVAKAQAEYASFSQAQVDAIFRAAALAAADARISLAKMAAAETRMGVIEDKVIKNHFASEYIYNKY KDEKTCGILSEDPTFGTITIAEPVGIICGIVPTTNPTSTAIFKALISLKTRNAIIFSPHPRAKVSTTTAAKLVLDAAIAA GAPKDIIGWIDEPSVALSNQLMTHPKVNLILATGGPGMVKAAYSSGKPAIGVGAGNTPIVIDETADIKRAVSSILMSKTF DNGVVCASEQAVIVVDSIYEQVKERFATHGGYLLNAAQTAAMQQVILKNGGLNADIVGQSAATIAQMAGIDVPYTTKVLI GEVTDITEAEAFAHEKLSPLLGMYRAADFNDAFDKAEALVALGGIGHTSGLYTDQDTQTERVKTFGFRMKTARILINTPA SQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPSHLINKKTVAKRAENMLWHKLPSSIYFRRGSLPIALEELSDKRRA LVVTDRFLFNQGYCDETLKILKAQGLETEVFYEVEADPTLATVRQGAKVANSFKPDVIIALGGGSPMDAAKIIWVMYEHP DVDFADLALRFMDIRKRIYKFPKMGVKATMVAIPTTSGTGSEVTPFAVVTDEQTGKKYPIADYQLTPNMAIVDPNLVMDM PKSLTAFGGIDAITHALEAYVSVMANEYSDGQALQALDLLCKYLPDAYQLGGASPIAREKVHNGATIAGIAFANAFLGIC HSMAHKLGAEFHLAHGLANALLISNVIRFNATDLPTKQAAFSQYDRPKALCRYAAIADHLALDGNSDAEKVEKLLEKIEQ LKKTLGIPASIQEAGVNEADFLAKLDELAEDAFDDQCTGANPRYPLISELKQLLLDSYYGRPFTEQ
Sequences:
>Translated_866_residues MTVTNAQELDLMVERVAKAQAEYASFSQAQVDAIFRAAALAAADARISLAKMAAAETRMGVIEDKVIKNHFASEYIYNKY KDEKTCGILSEDPTFGTITIAEPVGIICGIVPTTNPTSTAIFKALISLKTRNAIIFSPHPRAKVSTTTAAKLVLDAAIAA GAPKDIIGWIDEPSVALSNQLMTHPKVNLILATGGPGMVKAAYSSGKPAIGVGAGNTPIVIDETADIKRAVSSILMSKTF DNGVVCASEQAVIVVDSIYEQVKERFATHGGYLLNAAQTAAMQQVILKNGGLNADIVGQSAATIAQMAGIDVPYTTKVLI GEVTDITEAEAFAHEKLSPLLGMYRAADFNDAFDKAEALVALGGIGHTSGLYTDQDTQTERVKTFGFRMKTARILINTPA SQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPSHLINKKTVAKRAENMLWHKLPSSIYFRRGSLPIALEELSDKRRA LVVTDRFLFNQGYCDETLKILKAQGLETEVFYEVEADPTLATVRQGAKVANSFKPDVIIALGGGSPMDAAKIIWVMYEHP DVDFADLALRFMDIRKRIYKFPKMGVKATMVAIPTTSGTGSEVTPFAVVTDEQTGKKYPIADYQLTPNMAIVDPNLVMDM PKSLTAFGGIDAITHALEAYVSVMANEYSDGQALQALDLLCKYLPDAYQLGGASPIAREKVHNGATIAGIAFANAFLGIC HSMAHKLGAEFHLAHGLANALLISNVIRFNATDLPTKQAAFSQYDRPKALCRYAAIADHLALDGNSDAEKVEKLLEKIEQ LKKTLGIPASIQEAGVNEADFLAKLDELAEDAFDDQCTGANPRYPLISELKQLLLDSYYGRPFTEQ >Mature_865_residues TVTNAQELDLMVERVAKAQAEYASFSQAQVDAIFRAAALAAADARISLAKMAAAETRMGVIEDKVIKNHFASEYIYNKYK DEKTCGILSEDPTFGTITIAEPVGIICGIVPTTNPTSTAIFKALISLKTRNAIIFSPHPRAKVSTTTAAKLVLDAAIAAG APKDIIGWIDEPSVALSNQLMTHPKVNLILATGGPGMVKAAYSSGKPAIGVGAGNTPIVIDETADIKRAVSSILMSKTFD NGVVCASEQAVIVVDSIYEQVKERFATHGGYLLNAAQTAAMQQVILKNGGLNADIVGQSAATIAQMAGIDVPYTTKVLIG EVTDITEAEAFAHEKLSPLLGMYRAADFNDAFDKAEALVALGGIGHTSGLYTDQDTQTERVKTFGFRMKTARILINTPAS QGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPSHLINKKTVAKRAENMLWHKLPSSIYFRRGSLPIALEELSDKRRAL VVTDRFLFNQGYCDETLKILKAQGLETEVFYEVEADPTLATVRQGAKVANSFKPDVIIALGGGSPMDAAKIIWVMYEHPD VDFADLALRFMDIRKRIYKFPKMGVKATMVAIPTTSGTGSEVTPFAVVTDEQTGKKYPIADYQLTPNMAIVDPNLVMDMP KSLTAFGGIDAITHALEAYVSVMANEYSDGQALQALDLLCKYLPDAYQLGGASPIAREKVHNGATIAGIAFANAFLGICH SMAHKLGAEFHLAHGLANALLISNVIRFNATDLPTKQAAFSQYDRPKALCRYAAIADHLALDGNSDAEKVEKLLEKIEQL KKTLGIPASIQEAGVNEADFLAKLDELAEDAFDDQCTGANPRYPLISELKQLLLDSYYGRPFTEQ
Specific function: This enzyme has three activities:ADH, ACDH, and PFL- deactivase. In aerobic conditions it acts as a hydrogen peroxide scavenger. The PFL deactivase activity catalyzes the quenching of the pyruvate-formate-lyase catalyst in an iron, NAD, and CoA dependent
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=320, Percent_Identity=26.5625, Blast_Score=84, Evalue=6e-16, Organism=Escherichia coli, GI1787493, Length=869, Percent_Identity=77.9056386651323, Blast_Score=1378, Evalue=0.0, Organism=Escherichia coli, GI48994951, Length=391, Percent_Identity=36.0613810741688, Blast_Score=200, Evalue=4e-52, Organism=Escherichia coli, GI1789163, Length=400, Percent_Identity=31, Blast_Score=194, Evalue=2e-50, Organism=Escherichia coli, GI1788797, Length=372, Percent_Identity=32.7956989247312, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI87082107, Length=378, Percent_Identity=30.6878306878307, Blast_Score=174, Evalue=2e-44, Organism=Escherichia coli, GI1789386, Length=389, Percent_Identity=24.6786632390745, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1789015, Length=174, Percent_Identity=26.4367816091954, Blast_Score=63, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17537053, Length=272, Percent_Identity=27.5735294117647, Blast_Score=105, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321181, Length=391, Percent_Identity=32.7365728900256, Blast_Score=185, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6320917, Length=177, Percent_Identity=25.4237288135593, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24657991, Length=325, Percent_Identity=26.4615384615385, Blast_Score=91, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 93080; Mature: 92948
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2 ; PS00729 AP_NUCLEASE_F2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTNAQELDLMVERVAKAQAEYASFSQAQVDAIFRAAALAAADARISLAKMAAAETRMG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIEDKVIKNHFASEYIYNKYKDEKTCGILSEDPTFGTITIAEPVGIICGIVPTTNPTSTA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHH IFKALISLKTRNAIIFSPHPRAKVSTTTAAKLVLDAAIAAGAPKDIIGWIDEPSVALSNQ HHHHHHHHHCCCEEEECCCCCCEECHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHH LMTHPKVNLILATGGPGMVKAAYSSGKPAIGVGAGNTPIVIDETADIKRAVSSILMSKTF HHCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHCC DNGVVCASEQAVIVVDSIYEQVKERFATHGGYLLNAAQTAAMQQVILKNGGLNADIVGQS CCCEEEECCCCEEEHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEECCCH AATIAQMAGIDVPYTTKVLIGEVTDITEAEAFAHEKLSPLLGMYRAADFNDAFDKAEALV HHHHHHHHCCCCCCCHHEEEECHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ALGGIGHTSGLYTDQDTQTERVKTFGFRMKTARILINTPASQGGIGDLYNFKLAPSLTLG HCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCEEEECCCEEEE CGSWGGNSISENVGPSHLINKKTVAKRAENMLWHKLPSSIYFRRGSLPIALEELSDKRRA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCEEHHHHCCCCCE LVVTDRFLFNQGYCDETLKILKAQGLETEVFYEVEADPTLATVRQGAKVANSFKPDVIIA EEEEHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEE LGGGSPMDAAKIIWVMYEHPDVDFADLALRFMDIRKRIYKFPKMGVKATMVAIPTTSGTG ECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC SEVTPFAVVTDEQTGKKYPIADYQLTPNMAIVDPNLVMDMPKSLTAFGGIDAITHALEAY CCCCCEEEEECCCCCCCCCCCCEEECCCEEEECCHHHHHCCHHHHHHCCHHHHHHHHHHH VSVMANEYSDGQALQALDLLCKYLPDAYQLGGASPIAREKVHNGATIAGIAFANAFLGIC HHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHH HSMAHKLGAEFHLAHGLANALLISNVIRFNATDLPTKQAAFSQYDRPKALCRYAAIADHL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH ALDGNSDAEKVEKLLEKIEQLKKTLGIPASIQEAGVNEADFLAKLDELAEDAFDDQCTGA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC NPRYPLISELKQLLLDSYYGRPFTEQ CCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TVTNAQELDLMVERVAKAQAEYASFSQAQVDAIFRAAALAAADARISLAKMAAAETRMG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIEDKVIKNHFASEYIYNKYKDEKTCGILSEDPTFGTITIAEPVGIICGIVPTTNPTSTA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHH IFKALISLKTRNAIIFSPHPRAKVSTTTAAKLVLDAAIAAGAPKDIIGWIDEPSVALSNQ HHHHHHHHHCCCEEEECCCCCCEECHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHH LMTHPKVNLILATGGPGMVKAAYSSGKPAIGVGAGNTPIVIDETADIKRAVSSILMSKTF HHCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHCC DNGVVCASEQAVIVVDSIYEQVKERFATHGGYLLNAAQTAAMQQVILKNGGLNADIVGQS CCCEEEECCCCEEEHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEECCCH AATIAQMAGIDVPYTTKVLIGEVTDITEAEAFAHEKLSPLLGMYRAADFNDAFDKAEALV HHHHHHHHCCCCCCCHHEEEECHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ALGGIGHTSGLYTDQDTQTERVKTFGFRMKTARILINTPASQGGIGDLYNFKLAPSLTLG HCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCEEEECCCEEEE CGSWGGNSISENVGPSHLINKKTVAKRAENMLWHKLPSSIYFRRGSLPIALEELSDKRRA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCEEHHHHCCCCCE LVVTDRFLFNQGYCDETLKILKAQGLETEVFYEVEADPTLATVRQGAKVANSFKPDVIIA EEEEHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEE LGGGSPMDAAKIIWVMYEHPDVDFADLALRFMDIRKRIYKFPKMGVKATMVAIPTTSGTG ECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC SEVTPFAVVTDEQTGKKYPIADYQLTPNMAIVDPNLVMDMPKSLTAFGGIDAITHALEAY CCCCCEEEEECCCCCCCCCCCCEEECCCEEEECCHHHHHCCHHHHHHCCHHHHHHHHHHH VSVMANEYSDGQALQALDLLCKYLPDAYQLGGASPIAREKVHNGATIAGIAFANAFLGIC HHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHH HSMAHKLGAEFHLAHGLANALLISNVIRFNATDLPTKQAAFSQYDRPKALCRYAAIADHL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH ALDGNSDAEKVEKLLEKIEQLKKTLGIPASIQEAGVNEADFLAKLDELAEDAFDDQCTGA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC NPRYPLISELKQLLLDSYYGRPFTEQ CCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]