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The map label for this gene is yebS [H]

Identifier: 117920220

GI number: 117920220

Start: 2089296

End: 2089913

Strand: Reverse

Name: yebS [H]

Synonym: Shewana3_1773

Alternate gene names: 117920220

Gene position: 2089913-2089296 (Counterclockwise)

Preceding gene: 117920221

Following gene: 117920219

Centisome position: 42.03

GC content: 47.41

Gene sequence:

>618_bases
ATGAAACAACAGGGGAAAGATTTAGACCTGTGTCTGTGCCGAGTGTGCCGGCAGCTCAATAGCAGTGATAACACTCATTG
CAGCCGCTGTGAAGCCGAGTTACAGGTGCGCGATTACAGTAGCTTACAAAAAAGTTGGGCGCTGCTGATCACCGCCGCCA
TTTTGTTGGTTCCCGCTAACCTCTACCCTATTACTATGCTCACCAATCAGGGGCAAGTGCGCCACGATACGATCTTCTCT
GGCATTATCCATTTAGTGCATTCGGATATGTTACCCATCGCTATTATCGTGTTTATCGCCAGTATCTTAGTGCCTTGGGT
GAAGATTATCGGTTTGGCCACTTACCTCTGTGCCATTAGCTTTAATTTGCCGATTTCAAAAAAGAAACTCATGGTGGGAT
TTCATGTGATTGAGTGGATTGGCCGCTGGTCGATGCTCGATTTGTTTGTAATTTCCCTAACCGTTGCCCTCGTCAATATG
GGGCAACTACTCGATGCAAAGCCTGCACCCGCGGCCACGGCGTTTGCATTGGTGATTTTACTGACGCAACTTGCCGCAAA
AGTTTTAGACACTCGTTTACTCTGGGATCGATTGGAACCTCAAGATGACACAAATTGA

Upstream 100 bases:

>100_bases
ACCTTTTGCTTCACTATGCTTTTTTTAGTCACCCTGTTCTTACAGCGGGAATACGATATTGAGCATATGTGGAGTCTACT
GATGCAGGGGCGCCGCTAAG

Downstream 100 bases:

>100_bases
ATCGCCAAAAGTTGTGAAGAAAAAACTCTTTTCGCCGATTTGGCTGCTCCCAATTGTGGCGCTCGCACTCGGCGCATGGC
TGGGCATTAAGAGCATCAAA

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKQQGKDLDLCLCRVCRQLNSSDNTHCSRCEAELQVRDYSSLQKSWALLITAAILLVPANLYPITMLTNQGQVRHDTIFS
GIIHLVHSDMLPIAIIVFIASILVPWVKIIGLATYLCAISFNLPISKKKLMVGFHVIEWIGRWSMLDLFVISLTVALVNM
GQLLDAKPAPAATAFALVILLTQLAAKVLDTRLLWDRLEPQDDTN

Sequences:

>Translated_205_residues
MKQQGKDLDLCLCRVCRQLNSSDNTHCSRCEAELQVRDYSSLQKSWALLITAAILLVPANLYPITMLTNQGQVRHDTIFS
GIIHLVHSDMLPIAIIVFIASILVPWVKIIGLATYLCAISFNLPISKKKLMVGFHVIEWIGRWSMLDLFVISLTVALVNM
GQLLDAKPAPAATAFALVILLTQLAAKVLDTRLLWDRLEPQDDTN
>Mature_205_residues
MKQQGKDLDLCLCRVCRQLNSSDNTHCSRCEAELQVRDYSSLQKSWALLITAAILLVPANLYPITMLTNQGQVRHDTIFS
GIIHLVHSDMLPIAIIVFIASILVPWVKIIGLATYLCAISFNLPISKKKLMVGFHVIEWIGRWSMLDLFVISLTVALVNM
GQLLDAKPAPAATAFALVILLTQLAAKVLDTRLLWDRLEPQDDTN

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=198, Percent_Identity=43.9393939393939, Blast_Score=151, Evalue=3e-38,
Organism=Escherichia coli, GI1787183, Length=191, Percent_Identity=37.17277486911, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 22865; Mature: 22865

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQGKDLDLCLCRVCRQLNSSDNTHCSRCEAELQVRDYSSLQKSWALLITAAILLVPAN
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LYPITMLTNQGQVRHDTIFSGIIHLVHSDMLPIAIIVFIASILVPWVKIIGLATYLCAIS
CEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNLPISKKKLMVGFHVIEWIGRWSMLDLFVISLTVALVNMGQLLDAKPAPAATAFALVIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LTQLAAKVLDTRLLWDRLEPQDDTN
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKQQGKDLDLCLCRVCRQLNSSDNTHCSRCEAELQVRDYSSLQKSWALLITAAILLVPAN
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LYPITMLTNQGQVRHDTIFSGIIHLVHSDMLPIAIIVFIASILVPWVKIIGLATYLCAIS
CEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNLPISKKKLMVGFHVIEWIGRWSMLDLFVISLTVALVNMGQLLDAKPAPAATAFALVIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LTQLAAKVLDTRLLWDRLEPQDDTN
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]