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The map label for this gene is 117920206

Identifier: 117920206

GI number: 117920206

Start: 2072546

End: 2073502

Strand: Reverse

Name: 117920206

Synonym: Shewana3_1759

Alternate gene names: NA

Gene position: 2073502-2072546 (Counterclockwise)

Preceding gene: 117920207

Following gene: 117920203

Centisome position: 41.7

GC content: 50.68

Gene sequence:

>957_bases
ATGGGCAATATCATTGAGCAGCTGTTGTTTTCTGCTTCAATAACCGGTCCCATCTGTTTAATGTTAGCCTTAGGCGTGAT
GCTTAAACGCACCCAAGTGATTGATGAGCACTTTATTGATGTCGCCTCTAAGCTGGTTTTTAATGTCACCCTGCCCGCGC
TGTTGTTCCTCAGCATCATCAGCTCGCATCACGATCTTGCCGCCAGTGCGCCATTAATCGGTTATGGCTTATTAGCCAAC
TTACTGTTTTTTATCCTCTCGACCTACGCGACGAAACGATTTTTCCCCGAGCCGAAGGATCAAGGCGTCATCATTCAAGG
GGGATTTAGAGCCAATACCGCCATTATCGGCTTAGCCTATGTCTCGAATGCCTACGGCGAATCGGGCGTTGCCTTAGCGG
CCGTTTATGTGGCGTCCATGACGCTGCTCTACAATATTCAAGCCGTAATTTGTTTAAGCCCACGGGGAGAGGAGTCGAGC
CGCCGCGCCTTTGCGGTGATCATTAAAACCATCACTAAAAACCCGCTGATCATTGCCATTATGCTCGGCATGCTGTTTTA
TCTGCTGGCGATCCCTGTACCGAAAATGGTCCTCGATGCCGGACAATACTTTGCCAATATGACGCTGCCCTTAGCACTGC
TGTGCACCGGCGGCTCACTGGATATTGGCTCGCTCAGGCATGAAAAGTATTCCACTTGGTTCTCGACCGCCTTAAAACTG
GTGTTTGCTCCACTATTTATCACCCTTGGAGCCTTGATACTTGGCTATCGCGGTGTGGAACTAGCCTTAGTGTTTTTGAT
GAGCGCCGCGCCCACGGCGGCCGCAAGTTATGTGATGGCGCGGGCCATGGGGGGAAATGCCACCCTAGCCGCCAATATTA
TCGCCCTCACCACAGTTTGCTCACTGCTCACCTGCACCTTAGGCATTTTTATTCTATCGACCCTAGGGCTGATTTAA

Upstream 100 bases:

>100_bases
TAGTCATGGCTGAGTTGTAATCGCGGTTGTAATCACTTTTGTAATCGTTAAGCCGCACGGTTTCAGCGGCAACGCACTAT
GGAATTTTCGAGGAGAAGTT

Downstream 100 bases:

>100_bases
ACTGAGGCTTATTCAAACTTAGGCTGATTTAAAATTAGGGGTAATTTACATAAAACAAAGGCGAGCATGGCTCGCCTTTC
ATTTACTCTATGTCGATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MGNIIEQLLFSASITGPICLMLALGVMLKRTQVIDEHFIDVASKLVFNVTLPALLFLSIISSHHDLAASAPLIGYGLLAN
LLFFILSTYATKRFFPEPKDQGVIIQGGFRANTAIIGLAYVSNAYGESGVALAAVYVASMTLLYNIQAVICLSPRGEESS
RRAFAVIIKTITKNPLIIAIMLGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLRHEKYSTWFSTALKL
VFAPLFITLGALILGYRGVELALVFLMSAAPTAAASYVMARAMGGNATLAANIIALTTVCSLLTCTLGIFILSTLGLI

Sequences:

>Translated_318_residues
MGNIIEQLLFSASITGPICLMLALGVMLKRTQVIDEHFIDVASKLVFNVTLPALLFLSIISSHHDLAASAPLIGYGLLAN
LLFFILSTYATKRFFPEPKDQGVIIQGGFRANTAIIGLAYVSNAYGESGVALAAVYVASMTLLYNIQAVICLSPRGEESS
RRAFAVIIKTITKNPLIIAIMLGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLRHEKYSTWFSTALKL
VFAPLFITLGALILGYRGVELALVFLMSAAPTAAASYVMARAMGGNATLAANIIALTTVCSLLTCTLGIFILSTLGLI
>Mature_317_residues
GNIIEQLLFSASITGPICLMLALGVMLKRTQVIDEHFIDVASKLVFNVTLPALLFLSIISSHHDLAASAPLIGYGLLANL
LFFILSTYATKRFFPEPKDQGVIIQGGFRANTAIIGLAYVSNAYGESGVALAAVYVASMTLLYNIQAVICLSPRGEESSR
RAFAVIIKTITKNPLIIAIMLGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLRHEKYSTWFSTALKLV
FAPLFITLGALILGYRGVELALVFLMSAAPTAAASYVMARAMGGNATLAANIIALTTVCSLLTCTLGIFILSTLGLI

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 33894; Mature: 33763

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIIEQLLFSASITGPICLMLALGVMLKRTQVIDEHFIDVASKLVFNVTLPALLFLSII
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSHHDLAASAPLIGYGLLANLLFFILSTYATKRFFPEPKDQGVIIQGGFRANTAIIGLAY
HCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHH
VSNAYGESGVALAAVYVASMTLLYNIQAVICLSPRGEESSRRAFAVIIKTITKNPLIIAI
HHHHCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHH
MLGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLRHEKYSTWFSTALKL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
VFAPLFITLGALILGYRGVELALVFLMSAAPTAAASYVMARAMGGNATLAANIIALTTVC
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
SLLTCTLGIFILSTLGLI
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNIIEQLLFSASITGPICLMLALGVMLKRTQVIDEHFIDVASKLVFNVTLPALLFLSII
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSHHDLAASAPLIGYGLLANLLFFILSTYATKRFFPEPKDQGVIIQGGFRANTAIIGLAY
HCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHH
VSNAYGESGVALAAVYVASMTLLYNIQAVICLSPRGEESSRRAFAVIIKTITKNPLIIAI
HHHHCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHH
MLGMLFYLLAIPVPKMVLDAGQYFANMTLPLALLCTGGSLDIGSLRHEKYSTWFSTALKL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
VFAPLFITLGALILGYRGVELALVFLMSAAPTAAASYVMARAMGGNATLAANIIALTTVC
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
SLLTCTLGIFILSTLGLI
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]