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The map label for this gene is yggA [H]

Identifier: 117920100

GI number: 117920100

Start: 1944289

End: 1944903

Strand: Direct

Name: yggA [H]

Synonym: Shewana3_1653

Alternate gene names: 117920100

Gene position: 1944289-1944903 (Clockwise)

Preceding gene: 117920098

Following gene: 117920103

Centisome position: 39.1

GC content: 50.57

Gene sequence:

>615_bases
ATGCAAACGGCGTTTATACAAGGTATGGGCATTGGTGGTAGTTTGATTATTGCCGTAGGGGCGCAAAATGCCTTTGTGCT
AAAGCAGGGGATTAAGCGAGCGTATCCTTTGCCGATTGCGCTGCTTTGTTCAATCATCGATGCCTTAATGATCACTGCGG
GTGTGGCGGGGCTTGGGCACATTATCGAAGCCTTCCCGACCATCAAACATGTAGCCAGTTTTGGTGGCGCCGCTTTTTTG
ATTTGGTACGGAGCTAATGCACTTAAGGCCTCGTTTGTCGCTAAAGGGATGGAGATGGGCAATGCGCAAAATGCCGATAC
TTTGCGTAAGGCCATGCTGACCACGCTTGGGATCAGCCTGCTCAATCCACACCTTTATTTAGATACCGTCGTGCTGCTGG
GGAGTATTAGTACTCAGTTCGAAGATGCCCATCGTCCTTGGTTTGGTGCGGGCGCGGTACTGGCTTCGTTTATTTGGTTC
TTCAGCCTAAGTTTTGGTGCGCGTTTATTGGCGCCGATATTTAGTCGCCCAGCGGCGTGGCGATACTTAGACCGCTTTAT
TTGGTTGACCATGTGGAGCATTGCCGCGGCAGTTATTTGGCCTTATCTGGCCTAA

Upstream 100 bases:

>100_bases
TAAAATTATTAATTTTACTTATGATACATAAAAAACATTAGTTATATTAATTTTGTTGTTTTGTCTATGCTAGCGCCTTC
TTCAGACATGAGAGGTAGTT

Downstream 100 bases:

>100_bases
TCTTGGGCAACTAAGCAGCATCCGCTTGAATTTATTCCGCAAATTAGGTTGATTTTTAGACGCAAGCTGAAAATTTTTCA
TGAAAAAAGGCCCTGATAAA

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MQTAFIQGMGIGGSLIIAVGAQNAFVLKQGIKRAYPLPIALLCSIIDALMITAGVAGLGHIIEAFPTIKHVASFGGAAFL
IWYGANALKASFVAKGMEMGNAQNADTLRKAMLTTLGISLLNPHLYLDTVVLLGSISTQFEDAHRPWFGAGAVLASFIWF
FSLSFGARLLAPIFSRPAAWRYLDRFIWLTMWSIAAAVIWPYLA

Sequences:

>Translated_204_residues
MQTAFIQGMGIGGSLIIAVGAQNAFVLKQGIKRAYPLPIALLCSIIDALMITAGVAGLGHIIEAFPTIKHVASFGGAAFL
IWYGANALKASFVAKGMEMGNAQNADTLRKAMLTTLGISLLNPHLYLDTVVLLGSISTQFEDAHRPWFGAGAVLASFIWF
FSLSFGARLLAPIFSRPAAWRYLDRFIWLTMWSIAAAVIWPYLA
>Mature_204_residues
MQTAFIQGMGIGGSLIIAVGAQNAFVLKQGIKRAYPLPIALLCSIIDALMITAGVAGLGHIIEAFPTIKHVASFGGAAFL
IWYGANALKASFVAKGMEMGNAQNADTLRKAMLTTLGISLLNPHLYLDTVVLLGSISTQFEDAHRPWFGAGAVLASFIWF
FSLSFGARLLAPIFSRPAAWRYLDRFIWLTMWSIAAAVIWPYLA

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=196, Percent_Identity=39.2857142857143, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22007; Mature: 22007

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTAFIQGMGIGGSLIIAVGAQNAFVLKQGIKRAYPLPIALLCSIIDALMITAGVAGLGH
CCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IIEAFPTIKHVASFGGAAFLIWYGANALKASFVAKGMEMGNAQNADTLRKAMLTTLGISL
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LNPHLYLDTVVLLGSISTQFEDAHRPWFGAGAVLASFIWFFSLSFGARLLAPIFSRPAAW
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RYLDRFIWLTMWSIAAAVIWPYLA
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTAFIQGMGIGGSLIIAVGAQNAFVLKQGIKRAYPLPIALLCSIIDALMITAGVAGLGH
CCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IIEAFPTIKHVASFGGAAFLIWYGANALKASFVAKGMEMGNAQNADTLRKAMLTTLGISL
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
LNPHLYLDTVVLLGSISTQFEDAHRPWFGAGAVLASFIWFFSLSFGARLLAPIFSRPAAW
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RYLDRFIWLTMWSIAAAVIWPYLA
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]