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The map label for this gene is perM [H]

Identifier: 117920098

GI number: 117920098

Start: 1942047

End: 1943147

Strand: Direct

Name: perM [H]

Synonym: Shewana3_1651

Alternate gene names: 117920098

Gene position: 1942047-1943147 (Clockwise)

Preceding gene: 117920097

Following gene: 117920100

Centisome position: 39.06

GC content: 49.23

Gene sequence:

>1101_bases
ATGTTTAGTTTTTTCTCTCGTTGGTATCAAGAGCGCTTTAGCGATCCTCAGGCGGTGACGTTGCTCGCCATTCTCGTCGG
CCTTGCCCTAGTGTTGTATTTTGCGGGTGGCTTATTAGCGCCGTTACTCGTGGCGTTAGTGCTGGCCTTTTTGCTCGAAT
GGCCCGTGGCGCAAATGCTGAAATTGGGGATTAATCGCACGACTGGCGCTTCTTTAGTACTCGTGCTGTTTTTAGGGATA
GTGGTGCTGCTGACCTTTGGCCTTATCCCGAGCGTGTGGCGCCAAGGCGTGAGCTTGATGACAGATTTGCCGAGTATGAT
CGACAAGGGCTTACAAACCTTGCAGGGATTAGCGACCCAGTATCCGCAGTTTGTCAGCTCTGAGCAGCTCAATTTAATGG
TCGCCGAGCTTAAAAAACTGCTCGATACCCAGCATCTGCTCGATATTGCCAAGCAGTTGATTGGTTATTCTGCCTCGTTA
TTGGTGCTGATGGTGTACGCCATTTTAGTGCCCTTATTAGTGTTTTTCTTTCTGAAGGATAAAGACCAGCTGATCAGTGG
TAGCAAACGTTTTTTCCCTACTAATCGACAATTAGCCCGCAAGGTATGGTTTGAGATGCACCAGCAGATCTTCAACTATA
TCCGCGGCAAAGTGATTGAGATTGTGATTGTCGGGGTGGCGAGCTACATCTTCTTTGCCTTTATGGGGCTGAGATACTCG
GCTTTACTCGGGGTATTGACTGGTTTGTCGGTGCTCATTCCCTATGTAGGCGCGACCTTAGTCACTTTACCTATCATGTT
GGTGGCCTTCTTCCAGTGGGGCTTTAGCTCCGAGTTTGGCTATTTGATGTTAGGTTACGGCATTATTCAGGCGTTAGATG
GTAACGTGCTGGTGCCTATTTTGTTTTCCGATGCGGTGGATTTACACCCAGTCATCATTATCGCCGCCGTGTTGGTGTTT
GGTGGTTTATGGGGCGTTTGGGGCGTTTTCTTTGCTATTCCATTAGCCTCCTTGGTGAAAGCGGTGATCAACGCTTGGCC
GAAAACCGAGATTGAACCCGTGGCGATAACGCAGGTGAAGGCGGATTCGGCAGAAGCCTAA

Upstream 100 bases:

>100_bases
AGCATATACACAGTAAAACGGATGCGATAAGGTTAACCACCAAAGCATAAGCATCTTTCCTGCGTTTTCGGAAAGCCAAT
CACCTCATTGGAACGAATTC

Downstream 100 bases:

>100_bases
GCCGCTGGCAGTAGGTAAAAACGAATAGAAAAAAACTGGGCCTGAGTGCTCAGTTTTTTGTCCGCTAACTATTTCTACTA
ACAATTGTTTTACTCACTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MFSFFSRWYQERFSDPQAVTLLAILVGLALVLYFAGGLLAPLLVALVLAFLLEWPVAQMLKLGINRTTGASLVLVLFLGI
VVLLTFGLIPSVWRQGVSLMTDLPSMIDKGLQTLQGLATQYPQFVSSEQLNLMVAELKKLLDTQHLLDIAKQLIGYSASL
LVLMVYAILVPLLVFFFLKDKDQLISGSKRFFPTNRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYS
ALLGVLTGLSVLIPYVGATLVTLPIMLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPILFSDAVDLHPVIIIAAVLVF
GGLWGVWGVFFAIPLASLVKAVINAWPKTEIEPVAITQVKADSAEA

Sequences:

>Translated_366_residues
MFSFFSRWYQERFSDPQAVTLLAILVGLALVLYFAGGLLAPLLVALVLAFLLEWPVAQMLKLGINRTTGASLVLVLFLGI
VVLLTFGLIPSVWRQGVSLMTDLPSMIDKGLQTLQGLATQYPQFVSSEQLNLMVAELKKLLDTQHLLDIAKQLIGYSASL
LVLMVYAILVPLLVFFFLKDKDQLISGSKRFFPTNRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYS
ALLGVLTGLSVLIPYVGATLVTLPIMLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPILFSDAVDLHPVIIIAAVLVF
GGLWGVWGVFFAIPLASLVKAVINAWPKTEIEPVAITQVKADSAEA
>Mature_366_residues
MFSFFSRWYQERFSDPQAVTLLAILVGLALVLYFAGGLLAPLLVALVLAFLLEWPVAQMLKLGINRTTGASLVLVLFLGI
VVLLTFGLIPSVWRQGVSLMTDLPSMIDKGLQTLQGLATQYPQFVSSEQLNLMVAELKKLLDTQHLLDIAKQLIGYSASL
LVLMVYAILVPLLVFFFLKDKDQLISGSKRFFPTNRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYS
ALLGVLTGLSVLIPYVGATLVTLPIMLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPILFSDAVDLHPVIIIAAVLVF
GGLWGVWGVFFAIPLASLVKAVINAWPKTEIEPVAITQVKADSAEA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=351, Percent_Identity=49.5726495726496, Blast_Score=344, Evalue=6e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40399; Mature: 40399

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]