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The map label for this gene is yccT [C]

Identifier: 117920032

GI number: 117920032

Start: 1858896

End: 1859612

Strand: Reverse

Name: yccT [C]

Synonym: Shewana3_1584

Alternate gene names: 117920032

Gene position: 1859612-1858896 (Counterclockwise)

Preceding gene: 117920033

Following gene: 117920030

Centisome position: 37.4

GC content: 50.35

Gene sequence:

>717_bases
ATGAAATCCCCCTCTATCCTGTGCGCATCCGCCATACTGCTTGCCAGCCTGCAACCCGTTAGTGCCGAAGTTCTCCTGCA
GCTACCAAGTGATGTCGAGCTGTTAACCGTGAATGGACAAAAGCCATTAAGCACCTCGCCAGTCACGCTGAGTGATGGAT
TGAACCAAATCGCGTTTCGCTACAATGCCCAGTACCGCAAACAGGCTAATTCGGTACGCTACCAATCGGACGTACTGATC
ATCCGCTTTAATGAAACCGACCAAGCATTACAGCTCAAACTGCCCAATATCGACTCGGCTAAAGCCGCAAAGCAGTTCGA
TGAGTCACCGTCAATCACGCTGTTAGATAAGCACAATCAAGCGATTAGCTTTGACCAAGACAGATTAGTGAAAAACGGGC
TTCAGATAGGCCGAAACTTCGAGCAGGAAATCTTTCAATACAATCAAGGCCAACATCCCGCCTCGATAACGCTTGCTGCG
GTGCAAAGCCAGCCTCAAGTATCAGCGACAACGAGAGCACCAACTCTGCAAGCCGCCACTTCAGCGCCATCAACAGCCGT
AACCGCCAGTGCAGCCGCATCAACAGCTGCAGTAACACAAGACACAGCACCTGACTCGCCGACCCAAGCTGAAATCAGCC
ATATGCTGGATTATTGGTATCACCTCGCCGATGACGCCACCAAAGCAAAATTCAAGGCCAAAATTAACGAGCAATAA

Upstream 100 bases:

>100_bases
TGCTTTGAGTGTCCTTTGTGATCATCGGCTTAGCTCTCCACTTTGTGTTAACGGCTATCTCACTTATCATTAGTGCGTGA
TATCAACCAAGAGAAAGCCT

Downstream 100 bases:

>100_bases
GCGTATTCGTAAGGTTTTGGCAGTAACAAGCGAGCAAGACACCTATCCAATACAGAAAGAGCAGCCTAGGTTGCTCTTTT
TATTGGATCGAACAAAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKSPSILCASAILLASLQPVSAEVLLQLPSDVELLTVNGQKPLSTSPVTLSDGLNQIAFRYNAQYRKQANSVRYQSDVLI
IRFNETDQALQLKLPNIDSAKAAKQFDESPSITLLDKHNQAISFDQDRLVKNGLQIGRNFEQEIFQYNQGQHPASITLAA
VQSQPQVSATTRAPTLQAATSAPSTAVTASAAASTAAVTQDTAPDSPTQAEISHMLDYWYHLADDATKAKFKAKINEQ

Sequences:

>Translated_238_residues
MKSPSILCASAILLASLQPVSAEVLLQLPSDVELLTVNGQKPLSTSPVTLSDGLNQIAFRYNAQYRKQANSVRYQSDVLI
IRFNETDQALQLKLPNIDSAKAAKQFDESPSITLLDKHNQAISFDQDRLVKNGLQIGRNFEQEIFQYNQGQHPASITLAA
VQSQPQVSATTRAPTLQAATSAPSTAVTASAAASTAAVTQDTAPDSPTQAEISHMLDYWYHLADDATKAKFKAKINEQ
>Mature_238_residues
MKSPSILCASAILLASLQPVSAEVLLQLPSDVELLTVNGQKPLSTSPVTLSDGLNQIAFRYNAQYRKQANSVRYQSDVLI
IRFNETDQALQLKLPNIDSAKAAKQFDESPSITLLDKHNQAISFDQDRLVKNGLQIGRNFEQEIFQYNQGQHPASITLAA
VQSQPQVSATTRAPTLQAATSAPSTAVTASAAASTAAVTQDTAPDSPTQAEISHMLDYWYHLADDATKAKFKAKINEQ

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 25812; Mature: 25812

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPSILCASAILLASLQPVSAEVLLQLPSDVELLTVNGQKPLSTSPVTLSDGLNQIAFR
CCCCHHHHHHHHHHHCCCCCCHHHEEECCCCCEEEEECCCCCCCCCCEEHHCCHHHHHHH
YNAQYRKQANSVRYQSDVLIIRFNETDQALQLKLPNIDSAKAAKQFDESPSITLLDKHNQ
HCCHHHHHHCCEEEECCEEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCC
AISFDQDRLVKNGLQIGRNFEQEIFQYNQGQHPASITLAAVQSQPQVSATTRAPTLQAAT
EECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCEECCCCCCEEHHC
SAPSTAVTASAAASTAAVTQDTAPDSPTQAEISHMLDYWYHLADDATKAKFKAKINEQ
CCCCCCEEHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCC
>Mature Secondary Structure
MKSPSILCASAILLASLQPVSAEVLLQLPSDVELLTVNGQKPLSTSPVTLSDGLNQIAFR
CCCCHHHHHHHHHHHCCCCCCHHHEEECCCCCEEEEECCCCCCCCCCEEHHCCHHHHHHH
YNAQYRKQANSVRYQSDVLIIRFNETDQALQLKLPNIDSAKAAKQFDESPSITLLDKHNQ
HCCHHHHHHCCEEEECCEEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCC
AISFDQDRLVKNGLQIGRNFEQEIFQYNQGQHPASITLAAVQSQPQVSATTRAPTLQAAT
EECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCEECCCCCCEEHHC
SAPSTAVTASAAASTAAVTQDTAPDSPTQAEISHMLDYWYHLADDATKAKFKAKINEQ
CCCCCCEEHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA