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The map label for this gene is dctP [H]

Identifier: 117919864

GI number: 117919864

Start: 1640832

End: 1641854

Strand: Reverse

Name: dctP [H]

Synonym: Shewana3_1416

Alternate gene names: 117919864

Gene position: 1641854-1640832 (Counterclockwise)

Preceding gene: 117919865

Following gene: 117919863

Centisome position: 33.02

GC content: 43.99

Gene sequence:

>1023_bases
ATGACATTGAATCAACAAATGGGTATCACACGTCCATTAAAAACCGTCGCAAAAATGCTGGCACTGGCCTCAGTGTTTGC
GACCAGCTTTAACGTGTTTGCGGCGCCCGTTGAAATCAAGTTCTCCCACGTGGTTGCAGAAAATACGCCAAAGGGTCAAA
TGGCGTTGAAGTTTAAAGAACTCGTTGAGCAACGTTTACCTGGTGAATATACGGTCAGTGTATTCCCTAACTCACAGTTA
TTTGGGGATAACAACGAGTTAGCGGCACTGCTCTTAAACGATGTGCAATTTGTCGCGCCTTCTCTCTCAAAATTTGAACG
TTATACCAAACGCCTACAGGTTTTCGACCTGCCATTCCTGTTTAATGACATGGATGCAGTAAACCGTTTCCAACAAGGTG
AAGCCGGTCAAGCACTGCTGAACTCAATGAGCCGTAAAGGTATTGTCGGTTTAGGTTATCTGCACAATGGTATGAAGCAG
TTTTCTGCTAACACACCACTGAAACAACCTTCTGATGCTAAAGGCTTAAAATTCCGTGTAATGGCATCTGACGTATTAGC
CGCCCAGTTTGATGCTGTGGGCGCCATTCCTGTGAAGAAACCATTCTCTGAAGTGTTTACCCTGCTGCAAACCCGTGCGA
TCGACGGTCAAGAAAACACTTGGTCTAACACCTACTCACAAAAATTCTATGAAGTTCAAAGCCAAATAACCGAAAGTAAC
CACGGCGTGCTGGACTACATGGTCGTAACCTCTGACGCCTTCTGGAAGAGCTTACCAGCGGATAAACGTAAAGTGATCAA
AGAAGCCTTAGATGAATCTATCGCTTTAGGTAACAAGATCGCCGCTGAAAAAGATAACGAAGACAAGCAATTAATCCTTG
ATTCTAAACGTTCGCAACTGGTGACCTTAACGCCAGATGAGCGTCAAAAATGGATTGATGTAATGAAACCTGTTTGGGCG
AAATTTGAAGACCAAGTAGGTAAAGATGTGATTGAAGCCGCTGTTGCTGCAAATAAACAATAA

Upstream 100 bases:

>100_bases
ACAGACCTCAGGGAAATCAAGGCTGTATTCCTACTCACACTTGGTAACAAACTAACCAAGGCTGAGGACAAATCCTAACA
ACAGAAAAAGGAACTCAAAA

Downstream 100 bases:

>100_bases
TGAAATAAACCGCTTAACCTCTATTTGGGGTTAAGCGGTATTTGAGCGAGGGGAGTACAGCTGTGATATCGCGAATTTTT
GGTTACTTTGAAGAAGGGGT

Product: TRAP dicarboxylate transporter, DctP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MTLNQQMGITRPLKTVAKMLALASVFATSFNVFAAPVEIKFSHVVAENTPKGQMALKFKELVEQRLPGEYTVSVFPNSQL
FGDNNELAALLLNDVQFVAPSLSKFERYTKRLQVFDLPFLFNDMDAVNRFQQGEAGQALLNSMSRKGIVGLGYLHNGMKQ
FSANTPLKQPSDAKGLKFRVMASDVLAAQFDAVGAIPVKKPFSEVFTLLQTRAIDGQENTWSNTYSQKFYEVQSQITESN
HGVLDYMVVTSDAFWKSLPADKRKVIKEALDESIALGNKIAAEKDNEDKQLILDSKRSQLVTLTPDERQKWIDVMKPVWA
KFEDQVGKDVIEAAVAANKQ

Sequences:

>Translated_340_residues
MTLNQQMGITRPLKTVAKMLALASVFATSFNVFAAPVEIKFSHVVAENTPKGQMALKFKELVEQRLPGEYTVSVFPNSQL
FGDNNELAALLLNDVQFVAPSLSKFERYTKRLQVFDLPFLFNDMDAVNRFQQGEAGQALLNSMSRKGIVGLGYLHNGMKQ
FSANTPLKQPSDAKGLKFRVMASDVLAAQFDAVGAIPVKKPFSEVFTLLQTRAIDGQENTWSNTYSQKFYEVQSQITESN
HGVLDYMVVTSDAFWKSLPADKRKVIKEALDESIALGNKIAAEKDNEDKQLILDSKRSQLVTLTPDERQKWIDVMKPVWA
KFEDQVGKDVIEAAVAANKQ
>Mature_339_residues
TLNQQMGITRPLKTVAKMLALASVFATSFNVFAAPVEIKFSHVVAENTPKGQMALKFKELVEQRLPGEYTVSVFPNSQLF
GDNNELAALLLNDVQFVAPSLSKFERYTKRLQVFDLPFLFNDMDAVNRFQQGEAGQALLNSMSRKGIVGLGYLHNGMKQF
SANTPLKQPSDAKGLKFRVMASDVLAAQFDAVGAIPVKKPFSEVFTLLQTRAIDGQENTWSNTYSQKFYEVQSQITESNH
GVLDYMVVTSDAFWKSLPADKRKVIKEALDESIALGNKIAAEKDNEDKQLILDSKRSQLVTLTPDERQKWIDVMKPVWAK
FEDQVGKDVIEAAVAANKQ

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=324, Percent_Identity=28.3950617283951, Blast_Score=128, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37965; Mature: 37834

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNQQMGITRPLKTVAKMLALASVFATSFNVFAAPVEIKFSHVVAENTPKGQMALKFKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEHEECCCCCCHHHHHHHH
LVEQRLPGEYTVSVFPNSQLFGDNNELAALLLNDVQFVAPSLSKFERYTKRLQVFDLPFL
HHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FNDMDAVNRFQQGEAGQALLNSMSRKGIVGLGYLHNGMKQFSANTPLKQPSDAKGLKFRV
HCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
MASDVLAAQFDAVGAIPVKKPFSEVFTLLQTRAIDGQENTWSNTYSQKFYEVQSQITESN
EHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
HGVLDYMVVTSDAFWKSLPADKRKVIKEALDESIALGNKIAAEKDNEDKQLILDSKRSQL
CCEEEEEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHEEEECCCCEE
VTLTPDERQKWIDVMKPVWAKFEDQVGKDVIEAAVAANKQ
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLNQQMGITRPLKTVAKMLALASVFATSFNVFAAPVEIKFSHVVAENTPKGQMALKFKE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEHEECCCCCCHHHHHHHH
LVEQRLPGEYTVSVFPNSQLFGDNNELAALLLNDVQFVAPSLSKFERYTKRLQVFDLPFL
HHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FNDMDAVNRFQQGEAGQALLNSMSRKGIVGLGYLHNGMKQFSANTPLKQPSDAKGLKFRV
HCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
MASDVLAAQFDAVGAIPVKKPFSEVFTLLQTRAIDGQENTWSNTYSQKFYEVQSQITESN
EHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
HGVLDYMVVTSDAFWKSLPADKRKVIKEALDESIALGNKIAAEKDNEDKQLILDSKRSQL
CCEEEEEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHEEEECCCCEE
VTLTPDERQKWIDVMKPVWAKFEDQVGKDVIEAAVAANKQ
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]