| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919865
Identifier: 117919865
GI number: 117919865
Start: 1642249
End: 1642479
Strand: Reverse
Name: 117919865
Synonym: Shewana3_1417
Alternate gene names: NA
Gene position: 1642479-1642249 (Counterclockwise)
Preceding gene: 117919867
Following gene: 117919864
Centisome position: 33.03
GC content: 48.92
Gene sequence:
>231_bases ATGGCCAGCGTCAGTCAATCTGCATCCCTCACCAATATTGCAGCGTATTTAAAGCATACTCATGCCTGCGATGAACAAAC CGCGCTGAGGGAAGCCCGTGAAGTCATGCGCAATCTCGTCAGCATGCGCCAAAAAGGTTTTATTACTGGCTGGTATTTCG ATGAGCGCGGGCATTTGGAGTTACTTCCTAGTGATGAAATCCTTAAGCGAATTGGCGAAGATCACGGCTGA
Upstream 100 bases:
>100_bases TGATCTTAATCAGCATCTGCTTAACTGAGTCTGTTACCCAGTATTTAATCCGATTAAACGCTGCTGATTGTTGCCTTAGG CATATTCGGAGATCAGCACT
Downstream 100 bases:
>100_bases CTGCCGCATTACTTCATCTTAGCCATCTCACCAATCCCCTGCTCTATAGTCATTTTTCAGCCAGCTTTTGATCTAAAAGC AACTTATTTTGCTCAGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MASVSQSASLTNIAAYLKHTHACDEQTALREAREVMRNLVSMRQKGFITGWYFDERGHLELLPSDEILKRIGEDHG
Sequences:
>Translated_76_residues MASVSQSASLTNIAAYLKHTHACDEQTALREAREVMRNLVSMRQKGFITGWYFDERGHLELLPSDEILKRIGEDHG >Mature_75_residues ASVSQSASLTNIAAYLKHTHACDEQTALREAREVMRNLVSMRQKGFITGWYFDERGHLELLPSDEILKRIGEDHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8631; Mature: 8500
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVSQSASLTNIAAYLKHTHACDEQTALREAREVMRNLVSMRQKGFITGWYFDERGHLE CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEE LLPSDEILKRIGEDHG ECCCHHHHHHHCCCCC >Mature Secondary Structure ASVSQSASLTNIAAYLKHTHACDEQTALREAREVMRNLVSMRQKGFITGWYFDERGHLE CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEE LLPSDEILKRIGEDHG ECCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA