| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919844
Identifier: 117919844
GI number: 117919844
Start: 1611693
End: 1611941
Strand: Reverse
Name: 117919844
Synonym: Shewana3_1396
Alternate gene names: NA
Gene position: 1611941-1611693 (Counterclockwise)
Preceding gene: 117919845
Following gene: 117919843
Centisome position: 32.42
GC content: 45.38
Gene sequence:
>249_bases ATGAAAAAAACTTCATTAGCACTTATTGCTGCTATTTCAATGTTAGGTTCAGTTGCTGCTAATGCTAACCCAACGACTGG TGGAACGACTACTGGTGGTACTACGAGTGGCGGCGCTACTGGTACTATTGTTGCGGGTAGTATCGCAGCAGGGGCAGTTG TAACAGGAGCGTTAGTTGCTGCAAATGGTTCAGATGGCAACCCTGTCACAACATCTAACAGCAACTCTACATCAGTGTCA TCTAACTAA
Upstream 100 bases:
>100_bases AGCGAAACAGATTTAACATTGATCATTTAAGTTGAATCGCCTATCATGCTGTACTAGATTAGCTAAAAATTAGGTTAATT TTTTCTAAAAGGGAATCACG
Downstream 100 bases:
>100_bases TCATTAGTTAGTACATATCGCTAATAACCGCCTTCTGGCGGTTGTTTTTTTTAGGGTATTTAAATTTCCTAATCAAAATA GTGAAAACTTGAAATCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MKKTSLALIAAISMLGSVAANANPTTGGTTTGGTTSGGATGTIVAGSIAAGAVVTGALVAANGSDGNPVTTSNSNSTSVS SN
Sequences:
>Translated_82_residues MKKTSLALIAAISMLGSVAANANPTTGGTTTGGTTSGGATGTIVAGSIAAGAVVTGALVAANGSDGNPVTTSNSNSTSVS SN >Mature_82_residues MKKTSLALIAAISMLGSVAANANPTTGGTTTGGTTSGGATGTIVAGSIAAGAVVTGALVAANGSDGNPVTTSNSNSTSVS SN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7441; Mature: 7441
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTSLALIAAISMLGSVAANANPTTGGTTTGGTTSGGATGTIVAGSIAAGAVVTGALVA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHCHHHCCEEEE ANGSDGNPVTTSNSNSTSVSSN ECCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MKKTSLALIAAISMLGSVAANANPTTGGTTTGGTTSGGATGTIVAGSIAAGAVVTGALVA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHCHHHCCEEEE ANGSDGNPVTTSNSNSTSVSSN ECCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA