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The map label for this gene is hflC [H]

Identifier: 117918901

GI number: 117918901

Start: 519799

End: 520686

Strand: Reverse

Name: hflC [H]

Synonym: Shewana3_0444

Alternate gene names: 117918901

Gene position: 520686-519799 (Counterclockwise)

Preceding gene: 117918905

Following gene: 117918898

Centisome position: 10.47

GC content: 50.79

Gene sequence:

>888_bases
ATGATTAAAAATGAACTCAATCTGCCGAGCTCCATCGGCCTCTCTAAAATCATCCCTGTGGTGATTTTATTGATCCTGTT
TATCTCATTATTTGGTAGTTGGTATACGGTCGACCAAGGTGAACGCGGGGTGATCCTGCGTAACGGTAAGATCATCGGCA
CCGCCGAGCCAGGACTGGGCTTTAAACTGCCGCTGTTTGATACAGTCGTAAAAATCTCAACCCAAACCCACACCACCAGC
TACAGCTCATTGCAGGCCTATAGCCGCGATCAGCAACCCGCGACCCTTAATGCATCGGTGACCTTCAACGTGCCGCCGGA
TCGCGTCGAAGAAGTCTATGCCAATTTTAAGAGTATCGATGCCATGGTGGCACGACTACTCGACCGCCAAGTACCGACGC
AAGTCGAAAACATTTTTGGTAAATACACTGCAATTTCGGTCGTGCAGGAGCGGATTAAATTCGGTATCGATGTCACCAGC
GCCATCACCAACTCGGTCAAAGGCCCCATCGAAATCACTTCAGTACAGATTGAAAATATCGACTTCTCTAACGCCTATGA
AAAGTCCGTAGAAGACAGAATGCGCGCCGAGGTTGAGGTACAGACTCAACTGCAAAACCTAGAGAAAGAAAGAGTTAGCG
CCCAAATCGCCGTGACTCAAGCTCAGGCGGAAGCCGACTCGCAGCTTGCCCGCGCTAAGGCTGAGGCCGAAAGTATTAGG
ATTAAAGGGGATGCAGAAGCCTCTGCCATTAAGAGCCGCGCCGAGGCACTGGCACAAAACCAAAACCTAGTCGAACTGAC
CAAGGCCGAGAAATGGGACGGCAAGCTGCCAACCACAGTCCTCCCCACGGGCACCCTGCCCTTTATCGATGCTAAAAAGT
CGAACTAA

Upstream 100 bases:

>100_bases
TTTGCGGCAAAATGTAATCTAAATGATTAAAAAACAAACCGTATTCTACCCCGATAAATATAAATTCCACCTATCGCAAC
ACATCAGCAAAGGAAGCTAC

Downstream 100 bases:

>100_bases
TAAACGACTAAGCATCGCTAGTAAGCTATTTGCCACTAGCGATGCGTATTAGGCTTTACCATAAAAAATCCCCAGTCATT
GCTGGGGATTTTTATTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MIKNELNLPSSIGLSKIIPVVILLILFISLFGSWYTVDQGERGVILRNGKIIGTAEPGLGFKLPLFDTVVKISTQTHTTS
YSSLQAYSRDQQPATLNASVTFNVPPDRVEEVYANFKSIDAMVARLLDRQVPTQVENIFGKYTAISVVQERIKFGIDVTS
AITNSVKGPIEITSVQIENIDFSNAYEKSVEDRMRAEVEVQTQLQNLEKERVSAQIAVTQAQAEADSQLARAKAEAESIR
IKGDAEASAIKSRAEALAQNQNLVELTKAEKWDGKLPTTVLPTGTLPFIDAKKSN

Sequences:

>Translated_295_residues
MIKNELNLPSSIGLSKIIPVVILLILFISLFGSWYTVDQGERGVILRNGKIIGTAEPGLGFKLPLFDTVVKISTQTHTTS
YSSLQAYSRDQQPATLNASVTFNVPPDRVEEVYANFKSIDAMVARLLDRQVPTQVENIFGKYTAISVVQERIKFGIDVTS
AITNSVKGPIEITSVQIENIDFSNAYEKSVEDRMRAEVEVQTQLQNLEKERVSAQIAVTQAQAEADSQLARAKAEAESIR
IKGDAEASAIKSRAEALAQNQNLVELTKAEKWDGKLPTTVLPTGTLPFIDAKKSN
>Mature_295_residues
MIKNELNLPSSIGLSKIIPVVILLILFISLFGSWYTVDQGERGVILRNGKIIGTAEPGLGFKLPLFDTVVKISTQTHTTS
YSSLQAYSRDQQPATLNASVTFNVPPDRVEEVYANFKSIDAMVARLLDRQVPTQVENIFGKYTAISVVQERIKFGIDVTS
AITNSVKGPIEITSVQIENIDFSNAYEKSVEDRMRAEVEVQTQLQNLEKERVSAQIAVTQAQAEADSQLARAKAEAESIR
IKGDAEASAIKSRAEALAQNQNLVELTKAEKWDGKLPTTVLPTGTLPFIDAKKSN

Specific function: HflC and HflK could encode or regulate a protease [H]

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family. HflC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR010200
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 32382; Mature: 32382

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNELNLPSSIGLSKIIPVVILLILFISLFGSWYTVDQGERGVILRNGKIIGTAEPGLG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCEEEEECCCCCC
FKLPLFDTVVKISTQTHTTSYSSLQAYSRDQQPATLNASVTFNVPPDRVEEVYANFKSID
EECCHHHHHHHEECCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH
AMVARLLDRQVPTQVENIFGKYTAISVVQERIKFGIDVTSAITNSVKGPIEITSVQIENI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEEECC
DFSNAYEKSVEDRMRAEVEVQTQLQNLEKERVSAQIAVTQAQAEADSQLARAKAEAESIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHEE
IKGDAEASAIKSRAEALAQNQNLVELTKAEKWDGKLPTTVLPTGTLPFIDAKKSN
ECCCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCEEECCCCCCEEECCCCC
>Mature Secondary Structure
MIKNELNLPSSIGLSKIIPVVILLILFISLFGSWYTVDQGERGVILRNGKIIGTAEPGLG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCEEEEECCCCCC
FKLPLFDTVVKISTQTHTTSYSSLQAYSRDQQPATLNASVTFNVPPDRVEEVYANFKSID
EECCHHHHHHHEECCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH
AMVARLLDRQVPTQVENIFGKYTAISVVQERIKFGIDVTSAITNSVKGPIEITSVQIENI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEEECC
DFSNAYEKSVEDRMRAEVEVQTQLQNLEKERVSAQIAVTQAQAEADSQLARAKAEAESIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHEE
IKGDAEASAIKSRAEALAQNQNLVELTKAEKWDGKLPTTVLPTGTLPFIDAKKSN
ECCCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCEEECCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]