Click here to switch to the map view.

The map label for this gene is 117918834

Identifier: 117918834

GI number: 117918834

Start: 418996

End: 419703

Strand: Reverse

Name: 117918834

Synonym: Shewana3_0377

Alternate gene names: NA

Gene position: 419703-418996 (Counterclockwise)

Preceding gene: 117918835

Following gene: 117918833

Centisome position: 8.44

GC content: 46.89

Gene sequence:

>708_bases
ATGAACGGCAGGCTAAGGGATTACAATTCGTTTTTGCGGGCCTGTCGCTTAAGCCTAATCGCGTCTGCGCTTGCGGTCGG
CTGTTTATATGCCAGCCCGACCCAAAAGCTGGATGAAGCCAAAATTACCTCAACGCTGGAGAAGCGTTATGGTGAGCGCG
CGGGTATGCGTGCAAGAGCTTGGTTTAAAGTGGTGGCAGAGGCCAGCACGCTCGACGAAAAAGATAAACTTTTAAAAGTG
AACAACTTTTTTAACTTATTCCGCTTCGTCGATGACATCAAGTTATGGGGAGAATCAAACTACTGGGCGACTCCAATGGA
GTTTATTGGCGTAAATGGTGGCGACTGTGAGGACTTTTCCATTGCCAAATATTTCACGCTACTCCAATTAGGTGTGCCCG
AAGATAAGATGCGGATCACTATGGTTAAGGCCACGAGCGTGAATCAGTATCATATGGTGTTGGCTTACTATGACACCCCT
TCGTCAGTCCCTTTAGTTCTCGATAACCTAGACCATGTCATTAAACCTGCGACTCAGCGTAAAGATCTCATCCCTGTTTA
CAGCTTTAACGGTAAACAGTTATGGCTAAATAAAGAACAGGGACGAGGTGTGTTAGCAGGCTCGTCGACACGACTCGAAA
AATGGAATGACCTTAACCATAGGTTAGGGGTTGACCGACTCAGGCAGCCCAAATTAAAACTGGAGTAG

Upstream 100 bases:

>100_bases
CGTAGTCGCGGAAGTGACCGGTGATGATACGACGACAGATATGAAATGGACGATTTACTCTGTCGATGAACCCACTAAAT
AAAGGCTAACAGACTAGGCT

Downstream 100 bases:

>100_bases
CACCAAAGATGACACTGTTTAGACAGATATATTCGCTGCTTTTTAGCCTGTTCTTGCTGGTTGTTGCAAGCCTTGGCTAT
GTGCAATTTACTGAGACACA

Product: hypothetical protein

Products: NA

Alternate protein names: Transglutaminase Family Protein Cysteine Peptidase BTLCP; Periplasmic Protein-Like Protein; Sulfate Adenylyltransferase Small Subunit; Transglutaminase Domain Protein; OmpA/MotB; Sulfate Adenylyltransferase; Lipoprotein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNGRLRDYNSFLRACRLSLIASALAVGCLYASPTQKLDEAKITSTLEKRYGERAGMRARAWFKVVAEASTLDEKDKLLKV
NNFFNLFRFVDDIKLWGESNYWATPMEFIGVNGGDCEDFSIAKYFTLLQLGVPEDKMRITMVKATSVNQYHMVLAYYDTP
SSVPLVLDNLDHVIKPATQRKDLIPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLNHRLGVDRLRQPKLKLE

Sequences:

>Translated_235_residues
MNGRLRDYNSFLRACRLSLIASALAVGCLYASPTQKLDEAKITSTLEKRYGERAGMRARAWFKVVAEASTLDEKDKLLKV
NNFFNLFRFVDDIKLWGESNYWATPMEFIGVNGGDCEDFSIAKYFTLLQLGVPEDKMRITMVKATSVNQYHMVLAYYDTP
SSVPLVLDNLDHVIKPATQRKDLIPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLNHRLGVDRLRQPKLKLE
>Mature_235_residues
MNGRLRDYNSFLRACRLSLIASALAVGCLYASPTQKLDEAKITSTLEKRYGERAGMRARAWFKVVAEASTLDEKDKLLKV
NNFFNLFRFVDDIKLWGESNYWATPMEFIGVNGGDCEDFSIAKYFTLLQLGVPEDKMRITMVKATSVNQYHMVLAYYDTP
SSVPLVLDNLDHVIKPATQRKDLIPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLNHRLGVDRLRQPKLKLE

Specific function: Unknown

COG id: COG3672

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26861; Mature: 26861

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRLRDYNSFLRACRLSLIASALAVGCLYASPTQKLDEAKITSTLEKRYGERAGMRARA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
WFKVVAEASTLDEKDKLLKVNNFFNLFRFVDDIKLWGESNYWATPMEFIGVNGGDCEDFS
HHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCCCH
IAKYFTLLQLGVPEDKMRITMVKATSVNQYHMVLAYYDTPSSVPLVLDNLDHVIKPATQR
HHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCEECCHHHHHCCCCCC
KDLIPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLNHRLGVDRLRQPKLKLE
CCCCEEEECCCCEEEEECCCCCEEEECCCCCHHHHHCCHHHCCHHHHCCCCCCCC
>Mature Secondary Structure
MNGRLRDYNSFLRACRLSLIASALAVGCLYASPTQKLDEAKITSTLEKRYGERAGMRARA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
WFKVVAEASTLDEKDKLLKVNNFFNLFRFVDDIKLWGESNYWATPMEFIGVNGGDCEDFS
HHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCCCH
IAKYFTLLQLGVPEDKMRITMVKATSVNQYHMVLAYYDTPSSVPLVLDNLDHVIKPATQR
HHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCEECCHHHHHCCCCCC
KDLIPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLNHRLGVDRLRQPKLKLE
CCCCEEEECCCCEEEEECCCCCEEEECCCCCHHHHHCCHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA