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The map label for this gene is 117918635

Identifier: 117918635

GI number: 117918635

Start: 210775

End: 211902

Strand: Reverse

Name: 117918635

Synonym: Shewana3_0177

Alternate gene names: NA

Gene position: 211902-210775 (Counterclockwise)

Preceding gene: 117918637

Following gene: 117918634

Centisome position: 4.26

GC content: 48.05

Gene sequence:

>1128_bases
ATGCGGATATTGGAAACTATAATGAATAAACCCCCTATCATCTGGCTAAATGTCATCCTCTTTAGCCTCACCTTCCTCAG
TGCAGTTATCCTCGTTCCTTGGTATGGCCTAACCCACGGTTATGGCGCCAGCGAATGGATTGCTTTTGTGGTGTTAGCCT
TTGCAAGTGGTCTGTCGATCACAGCGGGTTACCATAGACTCTGGTCGCACAAGGCCTATAAAGCTCACCCTGCGGTACGT
TTCCTCTACGCGCTTGGCGGTGCATTAGCATTACAAAACAGTGCATTACATTGGGCATCCGATCATCGCGTGCACCATAA
GCATGTCGATGACAATGATAAAGATCCCTACTCGGCTAACATGGGTTTCTGGTACAGCCATATCGGTTGGATGCTGCGCG
AATACCAAGCTCAACGTTACCATGACTACCAAAACGTGCGTGATTTGCAGAACGACCGAATCGTGATGTGGCAACACAAG
CACTATCTCGCCCTCGTGATTCTGATGAATATTGGTCTGCCCGCGCTACTTGGCTGGTTCACTGGCAATATCGCTGGCAT
GTTGCTGATGGCGGGATTACTGCGCTTAGTCGTTGTGCATCACTGCACGTTCTTTATCAATTCCCTCGCCCACGTGTGGG
GCAGCCAACCCTATACCGATAAAAACACCGCCCGTGACAACGGTTTTCTGGCGATGTTGACCTACGGTGAGGGTTACCAT
AATTTCCACCATATCTTCGAAAACGATTACCGTAACGGTATTAAGTGGTGGCATTACGATCCGACTAAGTGGTTGATTAA
GGGTTTATCTTGGGTTGGCTTAGCCAAAGACCTACGCACCAGTCCACAGGAACGAATTGAGAGCGCACGCCTGCAGATGC
AACTGCTGCATGCCAAAAATAAAGTGGTCCATCTGCCCAATGCCGATGAAGTGATTGAGAAAATCCAACAGGAATACGAG
TTAATGAAGGAGCATTTACTCGAATACTATCAGGCAAAAAAGGCACTGTTAGACGCCAAGCGTAAACAACTGGTCGATCA
ACAGTTGTTACTGCAAGTCGAAGAATTGAAGACACGATTCCTCACTCAGCAAAAAAGCTGGAAGAGCCTCACGGCAAGTT
ATAGCTAG

Upstream 100 bases:

>100_bases
TAATGACGCGATAATACCGCTTTTGCGTCTGAAACACAGCCCCATCCACCTTGACCAAACAAGATTGCTAGGCTAAATTA
GCTTACAGTTGTACGCTCAA

Downstream 100 bases:

>100_bases
ACCACAATTCTCGGTAAAAATCATACGGCCGCCTTGCATGGTGGCCGTATCCTATTATGATGATGCCTCAATCACTTTTT
ACAGGATGTAGGGCTCATGT

Product: Delta-9 acyl-phospholipid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Acyl-CoA Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Fatty Acid Desaturase Protein

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRILETIMNKPPIIWLNVILFSLTFLSAVILVPWYGLTHGYGASEWIAFVVLAFASGLSITAGYHRLWSHKAYKAHPAVR
FLYALGGALALQNSALHWASDHRVHHKHVDDNDKDPYSANMGFWYSHIGWMLREYQAQRYHDYQNVRDLQNDRIVMWQHK
HYLALVILMNIGLPALLGWFTGNIAGMLLMAGLLRLVVVHHCTFFINSLAHVWGSQPYTDKNTARDNGFLAMLTYGEGYH
NFHHIFENDYRNGIKWWHYDPTKWLIKGLSWVGLAKDLRTSPQERIESARLQMQLLHAKNKVVHLPNADEVIEKIQQEYE
LMKEHLLEYYQAKKALLDAKRKQLVDQQLLLQVEELKTRFLTQQKSWKSLTASYS

Sequences:

>Translated_375_residues
MRILETIMNKPPIIWLNVILFSLTFLSAVILVPWYGLTHGYGASEWIAFVVLAFASGLSITAGYHRLWSHKAYKAHPAVR
FLYALGGALALQNSALHWASDHRVHHKHVDDNDKDPYSANMGFWYSHIGWMLREYQAQRYHDYQNVRDLQNDRIVMWQHK
HYLALVILMNIGLPALLGWFTGNIAGMLLMAGLLRLVVVHHCTFFINSLAHVWGSQPYTDKNTARDNGFLAMLTYGEGYH
NFHHIFENDYRNGIKWWHYDPTKWLIKGLSWVGLAKDLRTSPQERIESARLQMQLLHAKNKVVHLPNADEVIEKIQQEYE
LMKEHLLEYYQAKKALLDAKRKQLVDQQLLLQVEELKTRFLTQQKSWKSLTASYS
>Mature_375_residues
MRILETIMNKPPIIWLNVILFSLTFLSAVILVPWYGLTHGYGASEWIAFVVLAFASGLSITAGYHRLWSHKAYKAHPAVR
FLYALGGALALQNSALHWASDHRVHHKHVDDNDKDPYSANMGFWYSHIGWMLREYQAQRYHDYQNVRDLQNDRIVMWQHK
HYLALVILMNIGLPALLGWFTGNIAGMLLMAGLLRLVVVHHCTFFINSLAHVWGSQPYTDKNTARDNGFLAMLTYGEGYH
NFHHIFENDYRNGIKWWHYDPTKWLIKGLSWVGLAKDLRTSPQERIESARLQMQLLHAKNKVVHLPNADEVIEKIQQEYE
LMKEHLLEYYQAKKALLDAKRKQLVDQQLLLQVEELKTRFLTQQKSWKSLTASYS

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596961, Length=287, Percent_Identity=34.1463414634146, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI53759151, Length=279, Percent_Identity=34.7670250896057, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI148596938, Length=206, Percent_Identity=34.9514563106796, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17561776, Length=293, Percent_Identity=37.8839590443686, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17540878, Length=245, Percent_Identity=38.7755102040816, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17561774, Length=302, Percent_Identity=32.7814569536424, Blast_Score=155, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6321383, Length=284, Percent_Identity=42.9577464788732, Blast_Score=238, Evalue=1e-63,
Organism=Drosophila melanogaster, GI24646295, Length=297, Percent_Identity=34.006734006734, Blast_Score=165, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24646500, Length=293, Percent_Identity=33.7883959044369, Blast_Score=165, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24646303, Length=283, Percent_Identity=32.8621908127208, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24646299, Length=283, Percent_Identity=32.8621908127208, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24646305, Length=283, Percent_Identity=32.8621908127208, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24646301, Length=283, Percent_Identity=32.8621908127208, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24646297, Length=283, Percent_Identity=32.8621908127208, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI21358573, Length=247, Percent_Identity=34.8178137651822, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24662393, Length=282, Percent_Identity=30.1418439716312, Blast_Score=151, Evalue=8e-37,
Organism=Drosophila melanogaster, GI21358571, Length=244, Percent_Identity=34.4262295081967, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24651333, Length=272, Percent_Identity=25.3676470588235, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI161079187, Length=272, Percent_Identity=25.3676470588235, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43719; Mature: 43719

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILETIMNKPPIIWLNVILFSLTFLSAVILVPWYGLTHGYGASEWIAFVVLAFASGLSI
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH
TAGYHRLWSHKAYKAHPAVRFLYALGGALALQNSALHWASDHRVHHKHVDDNDKDPYSAN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCC
MGFWYSHIGWMLREYQAQRYHDYQNVRDLQNDRIVMWQHKHYLALVILMNIGLPALLGWF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHH
TGNIAGMLLMAGLLRLVVVHHCTFFINSLAHVWGSQPYTDKNTARDNGFLAMLTYGEGYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHH
NFHHIFENDYRNGIKWWHYDPTKWLIKGLSWVGLAKDLRTSPQERIESARLQMQLLHAKN
HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
KVVHLPNADEVIEKIQQEYELMKEHLLEYYQAKKALLDAKRKQLVDQQLLLQVEELKTRF
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQQKSWKSLTASYS
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MRILETIMNKPPIIWLNVILFSLTFLSAVILVPWYGLTHGYGASEWIAFVVLAFASGLSI
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH
TAGYHRLWSHKAYKAHPAVRFLYALGGALALQNSALHWASDHRVHHKHVDDNDKDPYSAN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCC
MGFWYSHIGWMLREYQAQRYHDYQNVRDLQNDRIVMWQHKHYLALVILMNIGLPALLGWF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHH
TGNIAGMLLMAGLLRLVVVHHCTFFINSLAHVWGSQPYTDKNTARDNGFLAMLTYGEGYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHH
NFHHIFENDYRNGIKWWHYDPTKWLIKGLSWVGLAKDLRTSPQERIESARLQMQLLHAKN
HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
KVVHLPNADEVIEKIQQEYELMKEHLLEYYQAKKALLDAKRKQLVDQQLLLQVEELKTRF
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQQKSWKSLTASYS
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA