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The map label for this gene is selD [H]

Identifier: 117918634

GI number: 117918634

Start: 209620

End: 210678

Strand: Reverse

Name: selD [H]

Synonym: Shewana3_0176

Alternate gene names: 117918634

Gene position: 210678-209620 (Counterclockwise)

Preceding gene: 117918635

Following gene: 117918633

Centisome position: 4.24

GC content: 50.33

Gene sequence:

>1059_bases
ATGTCGAATTCCGCTGTATCTTCCGCCGATAGCATTAAACTCACAGAATATAGTCATGGTGCCGGCTGCGGCTGTAAAAT
TTCCCCTAAAGTACTGACTACGATTCTTGCCTCGCAGCTGCCTGTATTTACCGATCCTAACCTGTTGGTTGGCAATCAAA
GCCGTGATGATGCAGCCGTTTATAAGCTCAACGATGAAATCGGCATTATCAGCACTACCGACTTTTTTATGCCTATCGTA
GATGATCCCTTTACCTTTGGCCGTATCGCCGCCACCAATGCCATTAGTGATATCTATGCCATGGGTGGCACGCCCATGAT
GGCGATTGCGATTCTAGGCTGGCCAGTGAACAAACTCCCCGCCGAGATTGCACAGCAAGTGGTTGATGGCGGCCGTCAAG
CCTGTATGGAAGCTGGGATAATGTTAGCCGGTGGTCACAGTATCGATGCGCCTGAGCCAATCTTTGGCCTTGCGGTCACA
GGGCAAATCGCCCTCACAGATTTAAAACAAAACGATACCGCAAAAGCGGACGATCGCTTGTATCTCACTAAACCTATCGG
TATTGGCATTCTCACCACGGCACAAAAGCAGAAGAAGCTCAAAGATGAAGATAGCCAAATTGCAGTAAATGCCATGTGCC
AGCTCAATAGCATAGGCGCCAAAATCGCTAAGATTAAAGGCGTGAACGCCCTCACCGATGTCACAGGTTTTGGGCTTGCA
GGCCATCTACTGGAAGTATGCCAAGGCGCTAAGCTCACCGCTAAACTTAATCTGGATGCCGTGCCACTCTTACCGCGCGC
CCTCGACTATCTAGCGCAAGGCTGTATTCCCGGTGGCACCCATCGTAACTACGACAGTTATGGCGAACACTTACCCACAC
TTACCGATCATCAAAAAGCCATTTTGTGTGACCCACAAACCAGTGGTGGCTTGCTAGTGGCAGTGTCGAGTGAGGCCGAA
GCGGAACTGGTGGCGCTACTTAATGCCCATCAAATTGAGCCTATCTGTATTGGCTCGCTAGAAACGCCCACCTCCACCGC
CAATGTGGTGCTGTGTTAA

Upstream 100 bases:

>100_bases
CTAGACCACAATTCTCGGTAAAAATCATACGGCCGCCTTGCATGGTGGCCGTATCCTATTATGATGATGCCTCAATCACT
TTTTACAGGATGTAGGGCTC

Downstream 100 bases:

>100_bases
TGACAACTAAGCTCATCCCCGCCCAGCAATATCACGATATCTTTATCGCTGGGCAGCCATTAATCGACTTAAGGGCGCCA
ATCGAGTTTGACCGCGGCGC

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSNSAVSSADSIKLTEYSHGAGCGCKISPKVLTTILASQLPVFTDPNLLVGNQSRDDAAVYKLNDEIGIISTTDFFMPIV
DDPFTFGRIAATNAISDIYAMGGTPMMAIAILGWPVNKLPAEIAQQVVDGGRQACMEAGIMLAGGHSIDAPEPIFGLAVT
GQIALTDLKQNDTAKADDRLYLTKPIGIGILTTAQKQKKLKDEDSQIAVNAMCQLNSIGAKIAKIKGVNALTDVTGFGLA
GHLLEVCQGAKLTAKLNLDAVPLLPRALDYLAQGCIPGGTHRNYDSYGEHLPTLTDHQKAILCDPQTSGGLLVAVSSEAE
AELVALLNAHQIEPICIGSLETPTSTANVVLC

Sequences:

>Translated_352_residues
MSNSAVSSADSIKLTEYSHGAGCGCKISPKVLTTILASQLPVFTDPNLLVGNQSRDDAAVYKLNDEIGIISTTDFFMPIV
DDPFTFGRIAATNAISDIYAMGGTPMMAIAILGWPVNKLPAEIAQQVVDGGRQACMEAGIMLAGGHSIDAPEPIFGLAVT
GQIALTDLKQNDTAKADDRLYLTKPIGIGILTTAQKQKKLKDEDSQIAVNAMCQLNSIGAKIAKIKGVNALTDVTGFGLA
GHLLEVCQGAKLTAKLNLDAVPLLPRALDYLAQGCIPGGTHRNYDSYGEHLPTLTDHQKAILCDPQTSGGLLVAVSSEAE
AELVALLNAHQIEPICIGSLETPTSTANVVLC
>Mature_351_residues
SNSAVSSADSIKLTEYSHGAGCGCKISPKVLTTILASQLPVFTDPNLLVGNQSRDDAAVYKLNDEIGIISTTDFFMPIVD
DPFTFGRIAATNAISDIYAMGGTPMMAIAILGWPVNKLPAEIAQQVVDGGRQACMEAGIMLAGGHSIDAPEPIFGLAVTG
QIALTDLKQNDTAKADDRLYLTKPIGIGILTTAQKQKKLKDEDSQIAVNAMCQLNSIGAKIAKIKGVNALTDVTGFGLAG
HLLEVCQGAKLTAKLNLDAVPLLPRALDYLAQGCIPGGTHRNYDSYGEHLPTLTDHQKAILCDPQTSGGLLVAVSSEAEA
ELVALLNAHQIEPICIGSLETPTSTANVVLC

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=373, Percent_Identity=26.2734584450402, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI15011844, Length=308, Percent_Identity=26.9480519480519, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI1788062, Length=333, Percent_Identity=61.5615615615616, Blast_Score=423, Evalue=1e-120,
Organism=Caenorhabditis elegans, GI17543426, Length=359, Percent_Identity=27.5766016713092, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24653602, Length=373, Percent_Identity=26.5415549597855, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24653604, Length=373, Percent_Identity=26.5415549597855, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI28574119, Length=288, Percent_Identity=29.1666666666667, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28574118, Length=267, Percent_Identity=29.9625468164794, Blast_Score=81, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36910; Mature: 36779

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSAVSSADSIKLTEYSHGAGCGCKISPKVLTTILASQLPVFTDPNLLVGNQSRDDAAV
CCCCCCCCCCCEEEEEECCCCCCCCEECHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEE
YKLNDEIGIISTTDFFMPIVDDPFTFGRIAATNAISDIYAMGGTPMMAIAILGWPVNKLP
EEECCCEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCHHHHH
AEIAQQVVDGGRQACMEAGIMLAGGHSIDAPEPIFGLAVTGQIALTDLKQNDTAKADDRL
HHHHHHHHHCHHHHHHHCCEEEECCCCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCEE
YLTKPIGIGILTTAQKQKKLKDEDSQIAVNAMCQLNSIGAKIAKIKGVNALTDVTGFGLA
EEECCCCCEEEECCHHHHHCCCCCCEEEEHHHHHHHHHCCEEHEECCCCHHHHHHCCCHH
GHLLEVCQGAKLTAKLNLDAVPLLPRALDYLAQGCIPGGTHRNYDSYGEHLPTLTDHQKA
HHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEE
ILCDPQTSGGLLVAVSSEAEAELVALLNAHQIEPICIGSLETPTSTANVVLC
EEECCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEC
>Mature Secondary Structure 
SNSAVSSADSIKLTEYSHGAGCGCKISPKVLTTILASQLPVFTDPNLLVGNQSRDDAAV
CCCCCCCCCCEEEEEECCCCCCCCEECHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEE
YKLNDEIGIISTTDFFMPIVDDPFTFGRIAATNAISDIYAMGGTPMMAIAILGWPVNKLP
EEECCCEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCHHHHH
AEIAQQVVDGGRQACMEAGIMLAGGHSIDAPEPIFGLAVTGQIALTDLKQNDTAKADDRL
HHHHHHHHHCHHHHHHHCCEEEECCCCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCEE
YLTKPIGIGILTTAQKQKKLKDEDSQIAVNAMCQLNSIGAKIAKIKGVNALTDVTGFGLA
EEECCCCCEEEECCHHHHHCCCCCCEEEEHHHHHHHHHCCEEHEECCCCHHHHHHCCCHH
GHLLEVCQGAKLTAKLNLDAVPLLPRALDYLAQGCIPGGTHRNYDSYGEHLPTLTDHQKA
HHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEE
ILCDPQTSGGLLVAVSSEAEAELVALLNAHQIEPICIGSLETPTSTANVVLC
EEECCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA