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The map label for this gene is mioC [H]

Identifier: 117918462

GI number: 117918462

Start: 3107

End: 3547

Strand: Reverse

Name: mioC [H]

Synonym: Shewana3_0003

Alternate gene names: 117918462

Gene position: 3547-3107 (Counterclockwise)

Preceding gene: 117918464

Following gene: 117918461

Centisome position: 0.07

GC content: 47.62

Gene sequence:

>441_bases
ATGACCAAGATCGCGATATTAGTCGGCACCACCCTCGGCAGCAGTGAATATATAGCGGATGAAATGCAGGCCCAGCTCAC
TCCATTAGGCCATGAAGTCGATACCTTTTTGAGTCCAACATTGGATGAATTGCAATCATATCCCCTTTGGATCATCGTTT
CGTCGACCCATGGCGCCGGCGATCTGCCCGACAATTTGCAGCCATTTAATAAAGAACTGCTGCTAAACACACCGGATCTG
ACCCAAGTTCAGTTCGCCTTATGTGCGATTGGCGACTCAAGTTATGACACCTTTTGCCAAGGCCCAGAAAAGTTAGTTGA
AGCGCTGGAATACAGCGGGGCAAAAGTCATTGTGGATAAGATCCAGATCGATGTACAACAGGATCCAGTGCCAGAAGACC
CAGCTTTAGCGTGGTTAGCACAATGGCAAGATCAAATTTAA

Upstream 100 bases:

>100_bases
GACTGCAAATCAATAGTGAGTAAATTTATACAGCAAAACACTGTAAGTAGATGTAAGCCCCAAAAATGATAGAAATTAAC
GACCATAGAGAGCAGTAACA

Downstream 100 bases:

>100_bases
GATCCTCTTTTGGAAAACATACCAAACCACCCACAGTTTAGACCCTATTTATCCACAAAAAACTACTTTAATGTATATTT
TTGTGGATAAGGTATTATTT

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTKIAILVGTTLGSSEYIADEMQAQLTPLGHEVDTFLSPTLDELQSYPLWIIVSSTHGAGDLPDNLQPFNKELLLNTPDL
TQVQFALCAIGDSSYDTFCQGPEKLVEALEYSGAKVIVDKIQIDVQQDPVPEDPALAWLAQWQDQI

Sequences:

>Translated_146_residues
MTKIAILVGTTLGSSEYIADEMQAQLTPLGHEVDTFLSPTLDELQSYPLWIIVSSTHGAGDLPDNLQPFNKELLLNTPDL
TQVQFALCAIGDSSYDTFCQGPEKLVEALEYSGAKVIVDKIQIDVQQDPVPEDPALAWLAQWQDQI
>Mature_145_residues
TKIAILVGTTLGSSEYIADEMQAQLTPLGHEVDTFLSPTLDELQSYPLWIIVSSTHGAGDLPDNLQPFNKELLLNTPDLT
QVQFALCAIGDSSYDTFCQGPEKLVEALEYSGAKVIVDKIQIDVQQDPVPEDPALAWLAQWQDQI

Specific function: Probable electron transporter required for biotin synthase activity [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790181, Length=142, Percent_Identity=41.5492957746479, Blast_Score=129, Evalue=9e-32,
Organism=Escherichia coli, GI1789154, Length=147, Percent_Identity=35.3741496598639, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015702
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 16046; Mature: 15915

Theoretical pI: Translated: 3.69; Mature: 3.69

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIAILVGTTLGSSEYIADEMQAQLTPLGHEVDTFLSPTLDELQSYPLWIIVSSTHGAG
CCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCCCEEEEEECCCCCC
DLPDNLQPFNKELLLNTPDLTQVQFALCAIGDSSYDTFCQGPEKLVEALEYSGAKVIVDK
CCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCCCEEEEEE
IQIDVQQDPVPEDPALAWLAQWQDQI
EEEEECCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TKIAILVGTTLGSSEYIADEMQAQLTPLGHEVDTFLSPTLDELQSYPLWIIVSSTHGAG
CEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCCCEEEEEECCCCCC
DLPDNLQPFNKELLLNTPDLTQVQFALCAIGDSSYDTFCQGPEKLVEALEYSGAKVIVDK
CCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCCCEEEEEE
IQIDVQQDPVPEDPALAWLAQWQDQI
EEEEECCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]