| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is mnmG [H]
Identifier: 117918461
GI number: 117918461
Start: 777
End: 2666
Strand: Reverse
Name: mnmG [H]
Synonym: Shewana3_0002
Alternate gene names: 117918461
Gene position: 2666-777 (Counterclockwise)
Preceding gene: 117918462
Following gene: 117918460
Centisome position: 0.05
GC content: 47.72
Gene sequence:
>1890_bases ATGCATTTTCATGAACGGTTTGATGTTATTGTTGTAGGTGGTGGTCATGCCGGAACTGAAGCCGCATTGGCTGCAGCAAG AATGGGCTCTAAGACATTATTGCTGACGCATAATCTTGATACTTTAGGCCAAATGTCATGCAATCCTGCGATCGGCGGTA TTGGCAAAGGTCATCTGGTAAAAGAAATCGATGCCTTAGGCGGTGCAATGGCGATCGCAACCGACTATGCAGGGATCCAA TTTAGAACCCTAAACTCGAGCAAAGGTCCAGCAGTAAGAGCGACTCGTGCTCAGGCTGATCGCGCTTTGTATCGTCAGAA GATCCAAAATATTCTGCAAAACCAAGCCAACTTACGTATTTTCCAACAAGCCGTTGATGATCTGGTGGTTGATAACGATC GCGTAGTCGGCGTAGTGACCCAAATGGGCTTAGCCTTCGAAGCGCCTGCAGTGGTCTTAACCGCGGGGACTTTCCTCAGT GGTAAAATTCACATTGGTTTAGAAAACTACAGTGGCGGTCGTGCTGGTGATCCACCATCTATCGCACTCGCCCACCGTTT ACGTGAGTTGCCAATCCGTGTTGGCCGCTTAAAAACGGGTACGCCACCACGTATCGATGCCAATACCATCGATTTTACCC AGATGACTGAGCAGAAAGGCGACACGCCATTACCTGTGATGTCGTTTATGGGCGATGTAAGCCATCACCCGAAACAAATT TCTTGTTGGATCACCCATACCAATGAAAAGACACACGATATTATTCGTGGAGGCTTAGATCGCAGCCCGATGTATTCAGG CGTGATCGAAGGGATTGGTCCACGTTACTGCCCTTCTATCGAAGACAAGATCCATCGTTTTTCAGATAAATCATCACACC AGATCTTTATCGAACCCGAAGGCTTAAACACCAACGAGATCTACCCTAACGGTATTTCCACCAGCTTGCCTTTCGATGTG CAGTTAAATCTGGTTCGTTCGATCCAAGGTATGGAAAATGCTGAGATTGTTCGCCCAGGTTATGCGATTGAGTATGATTA TTTCGATCCAAGGGATCTTAAAAACTCGTTAGAAACCAAAACCATCAATGGTTTGTTCTTCGCGGGCCAAATCAACGGTA CCACGGGTTATGAAGAAGCCGGCGCCCAAGGTTTACTCGCGGGGATGAACGCTGCACTGCAGGTTCAGGGCAAAGAAGCT TGGTGTCCTCGCCGTGATGAAGCCTACATAGGTGTATTGGTTGACGATTTATCAACCTTAGGGACTAAAGAACCCTACCG CATGTTTACCAGCCGCGCTGAATACCGCCTATTGCTGCGTGAAGACAACGCCGACCTGCGTTTAACCGCAAAAGGTCGTG AACTGGGTCTGGTGGATGATGCGCGTTGGGCCTCTTTCAGTGAAAAAATGGAATCGATCGAGTTAGAACTGCAACGTCTA CGTAGCCAATGGATCCATCCAAATTCACCATTGGTGCCAGTGTTAAATCCGCATTTAAACACGCCTATCTCCCGTGAAGC GTCGTTTGAAGAGTTGCTGCGTCGTCCAGAAATGGATTACAGCAAGTTGATGCAGATTGAAGGTTTTGGTCCAGGACTTG CCGATCCACTCGCAGCCGAGCAAGTACAGATCCAAGTGAAGTACTCTGGCTATATCCAACGTCAGCAGGAAGAGATCAAC AAAGCGGTACGCAATGAGAACACTGGTTTGCCATTGAACCTTGATTACAAAGAGGTTCCAGGGCTTTCAAATGAGGTTAT TGCTAAGTTAAATAGCCATAAGCCCGAAACTATTGGCCAAGCATCGCGTATCTCAGGGATTACGCCAGCAGCGATTTCAA TTCTGCTGGTGCATCTGAAAAAACGCGGTTTATTACGCAAGAGCGCGTAA
Upstream 100 bases:
>100_bases CTATGGATCCATTTTCTAAAAATGATCATTCACCTCATTCAAAGCAAATGCTAAAATGATCGGCTCACGTTGGGTCTCTT AAGTTACTAAAGGTAGGGTC
Downstream 100 bases:
>100_bases AAGCTAGCTTAATCGCCAGTTTGGTCGCAGAAGGGAAGCATTCAGGCTTCCCTTCGACGTTTCAGGGCTTCATAATAGCC AGCGAGTTTATAATCGTATC
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MHFHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKEIDALGGAMAIATDYAGIQ FRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQQAVDDLVVDNDRVVGVVTQMGLAFEAPAVVLTAGTFLS GKIHIGLENYSGGRAGDPPSIALAHRLRELPIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFMGDVSHHPKQI SCWITHTNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGLNTNEIYPNGISTSLPFDV QLNLVRSIQGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTINGLFFAGQINGTTGYEEAGAQGLLAGMNAALQVQGKEA WCPRRDEAYIGVLVDDLSTLGTKEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWASFSEKMESIELELQRL RSQWIHPNSPLVPVLNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLADPLAAEQVQIQVKYSGYIQRQQEEIN KAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQASRISGITPAAISILLVHLKKRGLLRKSA
Sequences:
>Translated_629_residues MHFHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKEIDALGGAMAIATDYAGIQ FRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQQAVDDLVVDNDRVVGVVTQMGLAFEAPAVVLTAGTFLS GKIHIGLENYSGGRAGDPPSIALAHRLRELPIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFMGDVSHHPKQI SCWITHTNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGLNTNEIYPNGISTSLPFDV QLNLVRSIQGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTINGLFFAGQINGTTGYEEAGAQGLLAGMNAALQVQGKEA WCPRRDEAYIGVLVDDLSTLGTKEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWASFSEKMESIELELQRL RSQWIHPNSPLVPVLNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLADPLAAEQVQIQVKYSGYIQRQQEEIN KAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQASRISGITPAAISILLVHLKKRGLLRKSA >Mature_629_residues MHFHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLVKEIDALGGAMAIATDYAGIQ FRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRIFQQAVDDLVVDNDRVVGVVTQMGLAFEAPAVVLTAGTFLS GKIHIGLENYSGGRAGDPPSIALAHRLRELPIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFMGDVSHHPKQI SCWITHTNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPEGLNTNEIYPNGISTSLPFDV QLNLVRSIQGMENAEIVRPGYAIEYDYFDPRDLKNSLETKTINGLFFAGQINGTTGYEEAGAQGLLAGMNAALQVQGKEA WCPRRDEAYIGVLVDDLSTLGTKEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWASFSEKMESIELELQRL RSQWIHPNSPLVPVLNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLADPLAAEQVQIQVKYSGYIQRQQEEIN KAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQASRISGITPAAISILLVHLKKRGLLRKSA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=642, Percent_Identity=46.1059190031153, Blast_Score=502, Evalue=1e-142, Organism=Homo sapiens, GI19882217, Length=667, Percent_Identity=44.3778110944528, Blast_Score=488, Evalue=1e-138, Organism=Homo sapiens, GI183227703, Length=682, Percent_Identity=43.4017595307918, Blast_Score=483, Evalue=1e-136, Organism=Escherichia coli, GI2367273, Length=629, Percent_Identity=74.8807631160572, Blast_Score=986, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=638, Percent_Identity=40.7523510971787, Blast_Score=472, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6321202, Length=621, Percent_Identity=47.1819645732689, Blast_Score=515, Evalue=1e-147, Organism=Drosophila melanogaster, GI24658174, Length=640, Percent_Identity=46.25, Blast_Score=513, Evalue=1e-145,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 69266; Mature: 69266
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLV CCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCCCHHH KEIDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRI HHHHHCCCEEEEEECCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHH FQQAVDDLVVDNDRVVGVVTQMGLAFEAPAVVLTAGTFLSGKIHIGLENYSGGRAGDPPS HHHHHHHHEECCCCEEEEEHHCCCCCCCCEEEEEECCEEECEEEEEEECCCCCCCCCCCH IALAHRLRELPIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFMGDVSHHPKQI HHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEE SCWITHTNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPE EEEEEECCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECC GLNTNEIYPNGISTSLPFDVQLNLVRSIQGMENAEIVRPGYAIEYDYFDPRDLKNSLETK CCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCEEECCCEEEEECCCCHHHHHHHHCCE TINGLFFAGQINGTTGYEEAGAQGLLAGMNAALQVQGKEAWCPRRDEAYIGVLVDDLSTL EECEEEEEEEECCCCCCHHCCCCHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHH GTKEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWASFSEKMESIELELQRL CCCCHHHHHHCCCCEEEEEEECCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHH RSQWIHPNSPLVPVLNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLADPLAAE HHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCHHHHEEECCCCCCCCCCCCCC QVQIQVKYSGYIQRQQEEINKAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQ EEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEECCHHHCCCCCHHHHHHHCCCCCHHHCC ASRISGITPAAISILLVHLKKRGLLRKSA HHHCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHFHERFDVIVVGGGHAGTEAALAAARMGSKTLLLTHNLDTLGQMSCNPAIGGIGKGHLV CCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCCCHHH KEIDALGGAMAIATDYAGIQFRTLNSSKGPAVRATRAQADRALYRQKIQNILQNQANLRI HHHHHCCCEEEEEECCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHH FQQAVDDLVVDNDRVVGVVTQMGLAFEAPAVVLTAGTFLSGKIHIGLENYSGGRAGDPPS HHHHHHHHEECCCCEEEEEHHCCCCCCCCEEEEEECCEEECEEEEEEECCCCCCCCCCCH IALAHRLRELPIRVGRLKTGTPPRIDANTIDFTQMTEQKGDTPLPVMSFMGDVSHHPKQI HHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEE SCWITHTNEKTHDIIRGGLDRSPMYSGVIEGIGPRYCPSIEDKIHRFSDKSSHQIFIEPE EEEEEECCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECC GLNTNEIYPNGISTSLPFDVQLNLVRSIQGMENAEIVRPGYAIEYDYFDPRDLKNSLETK CCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCEEECCCEEEEECCCCHHHHHHHHCCE TINGLFFAGQINGTTGYEEAGAQGLLAGMNAALQVQGKEAWCPRRDEAYIGVLVDDLSTL EECEEEEEEEECCCCCCHHCCCCHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHH GTKEPYRMFTSRAEYRLLLREDNADLRLTAKGRELGLVDDARWASFSEKMESIELELQRL CCCCHHHHHHCCCCEEEEEEECCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHH RSQWIHPNSPLVPVLNPHLNTPISREASFEELLRRPEMDYSKLMQIEGFGPGLADPLAAE HHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCHHHHEEECCCCCCCCCCCCCC QVQIQVKYSGYIQRQQEEINKAVRNENTGLPLNLDYKEVPGLSNEVIAKLNSHKPETIGQ EEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEECCHHHCCCCCHHHHHHHCCCCCHHHCC ASRISGITPAAISILLVHLKKRGLLRKSA HHHCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA