| Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
|---|---|
| Accession | NC_008573 |
| Length | 278,942 |
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The map label for this gene is 117676309
Identifier: 117676309
GI number: 117676309
Start: 260617
End: 262353
Strand: Direct
Name: 117676309
Synonym: Shewana3_4372
Alternate gene names: NA
Gene position: 260617-262353 (Clockwise)
Preceding gene: 117676306
Following gene: 117676310
Centisome position: 93.43
GC content: 44.27
Gene sequence:
>1737_bases ATGTCTCATTCTGTCATGTTAGCCGACCAAGGCGAGTTTAACTTTTCAACCGCTCAACGTGTTAGGCACTTGAAGGCAGA GGACCAGGATTTTGAATGGTATCCGTCTTCTCAGCACATTATTGATGTTGTTCGAAATGATTTGGTTAAGTCTAATTTCT TAGAATCTTATAACAGGGAGTCATCGTTGCTAGACATTGGTGCCGGTGATGGTCGAGTGCTTAGCGCCCTGAACATGCCG TTAGAGGACCGTCGCGGCGAAATGAGCCCACCTTTTTACAACCTGTACGCGATTGAAAAGAGCATTGTTCATTGCAGCCA GCTCGATAAAAAAGTGTTGGTTATTGGCACTGACTTTAATCAGCAAACCCTTGTTGATAAGCCCGTTGGCGTCATTTTCT GCAACCCTCCTTATTCGGCCTTTGAGCAATGGGCTACCCGTGTCATTTCCGAAGCTAATGCCGAAGTGTGTTATCTGGTA TTGCCGAAGCGCTGGTCTAACAGTCAAGATATCGAAAATGCGATTACAATGCGTGAAGCCGAAGCCGAGGTCATTGGGAC ATTCGATTTTCAAAATGATTGTGATCGCGAAACTCGTCATTCGGTACGGGTAGACATTATTCGTGTTAATTTAGGTTATA AAAATCATCGCCAATGCAAGGTTGACCCTTTCAAAGCGTTCTTTGACGCCAACTTTGACCTAGAACTAGCTGAAAGTGAT TATTCTGCAAAATTCAGAGGGCCATCCGACTCGACTAAGCAAAAGCTAAATGAATTAGTTCCTGGTGCCGACATGGTAAA GGCTATGCAATCACTTTACGATCATCAGATGGCCAAGCTAATGGATACCTATAGCGCACTCTCAGAAATTGATCCTGATT TACTGCGAGAACTAGAAGTTTCTAAGGCGTCGGTGCTGGAAAGTCTCAAACTCAAAATCAAGAGTCTCAAAAGTTTGTTT TGGAAAGAGTTGTTCGCTAAATTTGATGCGCTGACTTCTCGCCTGACTTCATCTAATCGTAAGGGGTTATTAGAGCTGTT AGAGAGGCACGTAAGCGTCGACTTCACCGCTGAGAACGCATACGCGATAGCTCAATGGGCAATAAAACACGCTGATGCTC TTCAAGATGATCAGTTCAAAGATTTCTACCTATCTATGAGCCAAGCCGCAAACGTGGTTAATTATTCCAGTAACCAACGC ACCTTCAAATACGACAGATGGCGTTATCGGGAGCTTGTGATGAATGGTCAAATCTCTCATTTTAAACTCGACTACCGTTG TGTAATGGAAAATGTTGGCGGCATCGTTAATGGTTACGACTATAACAGCTATTACAACCAGTGCGGTTTGTCTGTTCGTG CAATCGAATTTATCACCGATTTTGTCACCATCGCTGGCAATCTTGGTTTCGATACACGCGGCACACCTAAACCTTATGAG TTCAAATGGGCCAGCAACAAAGCCCACGACTTTAGATACATACAATCTAACGGCTCTAGCGAGGTACTGTTCTCAGTTCG TGCGTACCTTAACGGTAACCTACATATTAAGATGAACCCTAAGTTGGCGCTAAAGTTAAATGTAGTGGCTGGTAAGTTGT TTGGCTGGGTTCGTAGCGCAGAAGAAGCGGCGGCTGAAATGGAGGCTCCAGCATCTCAGGTCGTGGAAGTTACTGAAATG TTCGGCCATTCGTTATCGTTAACGCATAACTATCAAAACCTTTTGATGGCGGCTTAA
Upstream 100 bases:
>100_bases CTTTTAATGTTTAGTGTAGTGACGCTGTATTAATGTCAAAATTTGCGTGAATTTTTAAGCGTGAGATAGTTTGAACATCG AAACTTCTTAGGGTGTCCAA
Downstream 100 bases:
>100_bases TCCCTCCCATTCAGACGGCGCAAAGTTCAATTTTTGCGCCGTTTTGCATTTGTGAGATCCTTTAATCAGATAAGAAATTC AGTTATTAGAGGTGACTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MSHSVMLADQGEFNFSTAQRVRHLKAEDQDFEWYPSSQHIIDVVRNDLVKSNFLESYNRESSLLDIGAGDGRVLSALNMP LEDRRGEMSPPFYNLYAIEKSIVHCSQLDKKVLVIGTDFNQQTLVDKPVGVIFCNPPYSAFEQWATRVISEANAEVCYLV LPKRWSNSQDIENAITMREAEAEVIGTFDFQNDCDRETRHSVRVDIIRVNLGYKNHRQCKVDPFKAFFDANFDLELAESD YSAKFRGPSDSTKQKLNELVPGADMVKAMQSLYDHQMAKLMDTYSALSEIDPDLLRELEVSKASVLESLKLKIKSLKSLF WKELFAKFDALTSRLTSSNRKGLLELLERHVSVDFTAENAYAIAQWAIKHADALQDDQFKDFYLSMSQAANVVNYSSNQR TFKYDRWRYRELVMNGQISHFKLDYRCVMENVGGIVNGYDYNSYYNQCGLSVRAIEFITDFVTIAGNLGFDTRGTPKPYE FKWASNKAHDFRYIQSNGSSEVLFSVRAYLNGNLHIKMNPKLALKLNVVAGKLFGWVRSAEEAAAEMEAPASQVVEVTEM FGHSLSLTHNYQNLLMAA
Sequences:
>Translated_578_residues MSHSVMLADQGEFNFSTAQRVRHLKAEDQDFEWYPSSQHIIDVVRNDLVKSNFLESYNRESSLLDIGAGDGRVLSALNMP LEDRRGEMSPPFYNLYAIEKSIVHCSQLDKKVLVIGTDFNQQTLVDKPVGVIFCNPPYSAFEQWATRVISEANAEVCYLV LPKRWSNSQDIENAITMREAEAEVIGTFDFQNDCDRETRHSVRVDIIRVNLGYKNHRQCKVDPFKAFFDANFDLELAESD YSAKFRGPSDSTKQKLNELVPGADMVKAMQSLYDHQMAKLMDTYSALSEIDPDLLRELEVSKASVLESLKLKIKSLKSLF WKELFAKFDALTSRLTSSNRKGLLELLERHVSVDFTAENAYAIAQWAIKHADALQDDQFKDFYLSMSQAANVVNYSSNQR TFKYDRWRYRELVMNGQISHFKLDYRCVMENVGGIVNGYDYNSYYNQCGLSVRAIEFITDFVTIAGNLGFDTRGTPKPYE FKWASNKAHDFRYIQSNGSSEVLFSVRAYLNGNLHIKMNPKLALKLNVVAGKLFGWVRSAEEAAAEMEAPASQVVEVTEM FGHSLSLTHNYQNLLMAA >Mature_577_residues SHSVMLADQGEFNFSTAQRVRHLKAEDQDFEWYPSSQHIIDVVRNDLVKSNFLESYNRESSLLDIGAGDGRVLSALNMPL EDRRGEMSPPFYNLYAIEKSIVHCSQLDKKVLVIGTDFNQQTLVDKPVGVIFCNPPYSAFEQWATRVISEANAEVCYLVL PKRWSNSQDIENAITMREAEAEVIGTFDFQNDCDRETRHSVRVDIIRVNLGYKNHRQCKVDPFKAFFDANFDLELAESDY SAKFRGPSDSTKQKLNELVPGADMVKAMQSLYDHQMAKLMDTYSALSEIDPDLLRELEVSKASVLESLKLKIKSLKSLFW KELFAKFDALTSRLTSSNRKGLLELLERHVSVDFTAENAYAIAQWAIKHADALQDDQFKDFYLSMSQAANVVNYSSNQRT FKYDRWRYRELVMNGQISHFKLDYRCVMENVGGIVNGYDYNSYYNQCGLSVRAIEFITDFVTIAGNLGFDTRGTPKPYEF KWASNKAHDFRYIQSNGSSEVLFSVRAYLNGNLHIKMNPKLALKLNVVAGKLFGWVRSAEEAAAEMEAPASQVVEVTEMF GHSLSLTHNYQNLLMAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65890; Mature: 65759
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSVMLADQGEFNFSTAQRVRHLKAEDQDFEWYPSSQHIIDVVRNDLVKSNFLESYNRE CCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC SSLLDIGAGDGRVLSALNMPLEDRRGEMSPPFYNLYAIEKSIVHCSQLDKKVLVIGTDFN CCEEEECCCCCCEEHHHCCCHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEECCCC QQTLVDKPVGVIFCNPPYSAFEQWATRVISEANAEVCYLVLPKRWSNSQDIENAITMREA CCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHC EAEVIGTFDFQNDCDRETRHSVRVDIIRVNLGYKNHRQCKVDPFKAFFDANFDLELAESD CCEEEEEECCCCCCCHHHHCCEEEEEEEEECCCCCCCCCCCCHHHHHHCCCCCEEECCCC YSAKFRGPSDSTKQKLNELVPGADMVKAMQSLYDHQMAKLMDTYSALSEIDPDLLRELEV CCCEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SKASVLESLKLKIKSLKSLFWKELFAKFDALTSRLTSSNRKGLLELLERHVSVDFTAENA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCC YAIAQWAIKHADALQDDQFKDFYLSMSQAANVVNYSSNQRTFKYDRWRYRELVMNGQISH HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCEEEHHHHHHHHHHHCCCCCE FKLDYRCVMENVGGIVNGYDYNSYYNQCGLSVRAIEFITDFVTIAGNLGFDTRGTPKPYE EEEHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEE FKWASNKAHDFRYIQSNGSSEVLFSVRAYLNGNLHIKMNPKLALKLNVVAGKLFGWVRSA EEECCCCCCCEEEEECCCCCCEEEEEEHHHCCCEEEEECCCEEEEEEHHHHHHHHHHHHH EEAAAEMEAPASQVVEVTEMFGHSLSLTHNYQNLLMAA HHHHHHHCCCHHHHHHHHHHCCCCEEEEECHHHHHCCC >Mature Secondary Structure SHSVMLADQGEFNFSTAQRVRHLKAEDQDFEWYPSSQHIIDVVRNDLVKSNFLESYNRE CCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC SSLLDIGAGDGRVLSALNMPLEDRRGEMSPPFYNLYAIEKSIVHCSQLDKKVLVIGTDFN CCEEEECCCCCCEEHHHCCCHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEECCCC QQTLVDKPVGVIFCNPPYSAFEQWATRVISEANAEVCYLVLPKRWSNSQDIENAITMREA CCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHC EAEVIGTFDFQNDCDRETRHSVRVDIIRVNLGYKNHRQCKVDPFKAFFDANFDLELAESD CCEEEEEECCCCCCCHHHHCCEEEEEEEEECCCCCCCCCCCCHHHHHHCCCCCEEECCCC YSAKFRGPSDSTKQKLNELVPGADMVKAMQSLYDHQMAKLMDTYSALSEIDPDLLRELEV CCCEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SKASVLESLKLKIKSLKSLFWKELFAKFDALTSRLTSSNRKGLLELLERHVSVDFTAENA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCC YAIAQWAIKHADALQDDQFKDFYLSMSQAANVVNYSSNQRTFKYDRWRYRELVMNGQISH HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCEEEHHHHHHHHHHHCCCCCE FKLDYRCVMENVGGIVNGYDYNSYYNQCGLSVRAIEFITDFVTIAGNLGFDTRGTPKPYE EEEHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEE FKWASNKAHDFRYIQSNGSSEVLFSVRAYLNGNLHIKMNPKLALKLNVVAGKLFGWVRSA EEECCCCCCCEEEEECCCCCCEEEEEEHHHCCCEEEEECCCEEEEEEHHHHHHHHHHHHH EEAAAEMEAPASQVVEVTEMFGHSLSLTHNYQNLLMAA HHHHHHHCCCHHHHHHHHHHCCCCEEEEECHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA